RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 C12orf10Q9HB07 376 aa14.43□□□□□ -0.1
LSM4-206ENST00000600289 MCCC2Q9HCC0 563 aa14.43□□□□□ -0.1
LSM4-206ENST00000600289 GID8Q9NWU2 228 aa14.43□□□□□ -0.1
LSM4-206ENST00000600289 ELOVL5Q9NYP7 299 aa14.43□□□□□ -0.1
LSM4-206ENST00000600289 PROCRQ9UNN8 238 aa14.43□□□□□ -0.1
LSM4-206ENST00000600289 TRAPPC4Q9Y296 219 aa14.43□□□□□ -0.1
LSM4-206ENST00000600289 GMNCA6NCL1 334 aa14.42□□□□□ -0.1
LSM4-206ENST00000600289 SULT2B1O00204 365 aa14.42□□□□□ -0.1
LSM4-206ENST00000600289 SNX3O60493 162 aa14.42□□□□□ -0.1
LSM4-206ENST00000600289 PRKD3O94806 890 aa14.42□□□□□ -0.1
LSM4-206ENST00000600289 MFN2O95140 757 aa14.42□□□□□ -0.1
LSM4-206ENST00000600289 GOSR1O95249 250 aa14.42□□□□□ -0.1
LSM4-206ENST00000600289 PRG2P13727 222 aa14.42□□□□□ -0.1
LSM4-206ENST00000600289 DRD4P21917 467 aa14.42□□□□□ -0.1
LSM4-206ENST00000600289 KIR2DL3P43628 341 aa14.42□□□□□ -0.1
LSM4-206ENST00000600289 MYBPHQ13203 477 aa14.42□□□□□ -0.1
LSM4-206ENST00000600289 PDK3Q15120 406 aa14.42□□□□□ -0.1
LSM4-206ENST00000600289 VMACQ2NL98 169 aa14.42□□□□□ -0.1
LSM4-206ENST00000600289 ABLIM2Q6H8Q1 611 aa14.42□□□□□ -0.1
LSM4-206ENST00000600289 PPP4R4Q6NUP7 873 aa14.42□□□□□ -0.1
LSM4-206ENST00000600289 C6orf89Q6UWU4 347 aa14.42□□□□□ -0.1
LSM4-206ENST00000600289 CCDC80Q76M96 950 aa14.42□□□□□ -0.1
LSM4-206ENST00000600289 ARMC8Q8IUR7 673 aa14.42□□□□□ -0.1
LSM4-206ENST00000600289 LSMEM1Q8N8F7 131 aa14.42□□□□□ -0.1
LSM4-206ENST00000600289 ABHD3Q8WU67 409 aa14.42□□□□□ -0.1
LSM4-206ENST00000600289 PSD2Q9BQI7 771 aa14.42□□□□□ -0.1
LSM4-206ENST00000600289 POTEKPQ9BYX7 375 aa14.42□□□□□ -0.1
LSM4-206ENST00000600289 ARMCX1Q9P291 453 aa14.42□□□□□ -0.1
LSM4-206ENST00000600289 TMEM181Q9P2C4 612 aa14.42□□□□□ -0.1
LSM4-206ENST00000600289 KLHL9Q9P2J3 617 aa14.42□□□□□ -0.1
LSM4-206ENST00000600289 TESQ9UGI8 421 aaKnown RBP14.42□□□□□ -0.1
LSM4-206ENST00000600289 TMEM72A0PK05 275 aa14.41□□□□□ -0.1
LSM4-206ENST00000600289 TMEM229AB2RXF0 380 aa14.41□□□□□ -0.1
LSM4-206ENST00000600289 GCM2O75603 506 aaPredicted RBP14.41□□□□□ -0.1
LSM4-206ENST00000600289 SMNDC1O75940 238 aaKnown RBP eCLIP14.41□□□□□ -0.1
LSM4-206ENST00000600289 FESP07332 822 aa14.41□□□□□ -0.1
LSM4-206ENST00000600289 C8BP07358 591 aa14.41□□□□□ -0.1
LSM4-206ENST00000600289 CD99P14209 185 aa14.41□□□□□ -0.1
LSM4-206ENST00000600289 CD79BP40259 229 aa14.41□□□□□ -0.1
LSM4-206ENST00000600289 TLE4Q04727 773 aa14.41□□□□□ -0.1
LSM4-206ENST00000600289 INTS11Q5TA45 600 aaKnown RBP14.41□□□□□ -0.1
LSM4-206ENST00000600289 ZNF474Q6S9Z5 364 aaPredicted RBP14.41□□□□□ -0.1
LSM4-206ENST00000600289 PATL1Q86TB9 770 aaKnown RBP14.41□□□□□ -0.1
LSM4-206ENST00000600289 MTDHQ86UE4 582 aaKnown RBP14.41□□□□□ -0.1
LSM4-206ENST00000600289 COMTD1Q86VU5 262 aa14.41□□□□□ -0.1
LSM4-206ENST00000600289 OR10A6Q8NH74 314 aa14.41□□□□□ -0.1
LSM4-206ENST00000600289 C3orf49Q96BT1 292 aa14.41□□□□□ -0.1
LSM4-206ENST00000600289 ZHX1-C8orf76Q96EF9 292 aa14.41□□□□□ -0.1
LSM4-206ENST00000600289 ARL5BQ96KC2 179 aa14.41□□□□□ -0.1
LSM4-206ENST00000600289 ELAC2Q9BQ52 826 aaKnown RBP14.41□□□□□ -0.1
LSM4-206ENST00000600289 ZNF559Q9BR84 538 aa14.41□□□□□ -0.1
LSM4-206ENST00000600289 SLC39A3Q9BRY0 314 aa14.41□□□□□ -0.1
LSM4-206ENST00000600289 MYLK2Q9H1R3 596 aa14.41□□□□□ -0.1
LSM4-206ENST00000600289 OPN3Q9H1Y3 402 aaPredicted RBP14.41□□□□□ -0.1
LSM4-206ENST00000600289 CRIM1Q9NZV1 1036 aa14.41□□□□□ -0.1
LSM4-206ENST00000600289 ING1Q9UK53 422 aaPredicted RBP14.41□□□□□ -0.1
LSM4-206ENST00000600289 CLEC4AQ9UMR7 237 aa14.41□□□□□ -0.1
LSM4-206ENST00000600289 VPS13CQ709C8 3753 aa14.41□□□□□ -0.1
LSM4-206ENST00000600289 IGKV3D-15A0A087WSY6 115 aa14.4□□□□□ -0.1
LSM4-206ENST00000600289 LOC100653049A0A140TA62 436 aa14.4□□□□□ -0.1
LSM4-206ENST00000600289 FAM221AA4D161 298 aa14.4□□□□□ -0.1
LSM4-206ENST00000600289 ZNF724A8MTY0 619 aa14.4□□□□□ -0.1
LSM4-206ENST00000600289 TPST1O60507 370 aa14.4□□□□□ -0.1
LSM4-206ENST00000600289 KRT34O76011 436 aa14.4□□□□□ -0.1
LSM4-206ENST00000600289 YES1P07947 543 aa14.4□□□□□ -0.1
LSM4-206ENST00000600289 TFPIP10646 304 aa14.4□□□□□ -0.1
LSM4-206ENST00000600289 COX4I1P13073 169 aa14.4□□□□□ -0.1
LSM4-206ENST00000600289 CXCR1P25024 350 aa14.4□□□□□ -0.1
LSM4-206ENST00000600289 AQP1P29972 269 aa14.4□□□□□ -0.1
LSM4-206ENST00000600289 CPOXP36551 454 aa14.4□□□□□ -0.1
LSM4-206ENST00000600289 H3F3AP84243 136 aa14.4□□□□□ -0.1
LSM4-206ENST00000600289 DMTNQ08495 405 aa14.4□□□□□ -0.1
LSM4-206ENST00000600289 VEZF1Q14119 521 aa14.4□□□□□ -0.1
LSM4-206ENST00000600289 DAZAP2Q15038 168 aaPredicted RBP14.4□□□□□ -0.1
LSM4-206ENST00000600289 GLIPR1L2Q4G1C9 344 aa14.4□□□□□ -0.1
LSM4-206ENST00000600289 RABL3Q5HYI8 236 aa14.4□□□□□ -0.1
LSM4-206ENST00000600289 TMEM201Q5SNT2 666 aa14.4□□□□□ -0.1
LSM4-206ENST00000600289 ERICH5Q6P6B1 374 aa14.4□□□□□ -0.1
LSM4-206ENST00000600289 ARPINQ7Z6K5 226 aa14.4□□□□□ -0.1
LSM4-206ENST00000600289 ATG4DQ86TL0 474 aaPredicted RBP14.4□□□□□ -0.1
LSM4-206ENST00000600289 CADM2Q8N3J6 435 aa14.4□□□□□ -0.1
LSM4-206ENST00000600289 ZNF610Q8N9Z0 462 aa14.4□□□□□ -0.1
LSM4-206ENST00000600289 RCN3Q96D15 328 aa14.4□□□□□ -0.1
LSM4-206ENST00000600289 GPATCH1Q9BRR8 931 aaKnown RBP14.4□□□□□ -0.1
LSM4-206ENST00000600289 TRIM2Q9C040 744 aa14.4□□□□□ -0.1
LSM4-206ENST00000600289 OR11A1Q9GZK7 315 aa14.4□□□□□ -0.1
LSM4-206ENST00000600289 KLHL28Q9NXS3 571 aa14.4□□□□□ -0.1
LSM4-206ENST00000600289 AP3M1Q9Y2T2 418 aa14.4□□□□□ -0.1
LSM4-206ENST00000600289 NSD1Q96L73 2696 aaPredicted RBP14.39□□□□□ -0.11
LSM4-206ENST00000600289 TUBAL3A6NHL2 446 aa14.39□□□□□ -0.11
LSM4-206ENST00000600289 A8MVM7 634 aa14.39□□□□□ -0.11
LSM4-206ENST00000600289 FRS3O43559 492 aa14.39□□□□□ -0.11
LSM4-206ENST00000600289 EIF1BO60739 113 aaKnown RBP14.39□□□□□ -0.11
LSM4-206ENST00000600289 FMO6PO60774 539 aa14.39□□□□□ -0.11
LSM4-206ENST00000600289 FZD7O75084 574 aa14.39□□□□□ -0.11
LSM4-206ENST00000600289 NPIPB7O75200 414 aa14.39□□□□□ -0.11
LSM4-206ENST00000600289 EPXP11678 715 aa14.39□□□□□ -0.11
LSM4-206ENST00000600289 IMPDH2P12268 514 aa14.39□□□□□ -0.11
LSM4-206ENST00000600289 SLC16A1P53985 500 aa14.39□□□□□ -0.11
LSM4-206ENST00000600289 GNGT1P63211 74 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms