RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 WLSQ5T9L3 541 aa16.94■□□□□ 0.3
CCDC9-205ENST00000600117 C3orf33Q6P1S2 294 aa16.94■□□□□ 0.3
CCDC9-205ENST00000600117 ULK3Q6PHR2 472 aa16.94■□□□□ 0.3
CCDC9-205ENST00000600117 ADGRG5Q8IZF4 528 aa16.94■□□□□ 0.3
CCDC9-205ENST00000600117 LILRA2Q8N149 483 aa16.94■□□□□ 0.3
CCDC9-205ENST00000600117 OR5M9Q8NGP3 310 aa16.94■□□□□ 0.3
CCDC9-205ENST00000600117 DNAJA4Q8WW22 397 aaPredicted RBP16.94■□□□□ 0.3
CCDC9-205ENST00000600117 SMPDL3BQ92485 455 aa16.94■□□□□ 0.3
CCDC9-205ENST00000600117 SLC38A4Q969I6 547 aa16.94■□□□□ 0.3
CCDC9-205ENST00000600117 PRRC1Q96M27 445 aa16.94■□□□□ 0.3
CCDC9-205ENST00000600117 POLR2J2Q9GZM3 115 aaKnown RBP16.94■□□□□ 0.3
CCDC9-205ENST00000600117 POLR2J3Q9H1A7 115 aaKnown RBP16.94■□□□□ 0.3
CCDC9-205ENST00000600117 SERINC1Q9NRX5 453 aa16.94■□□□□ 0.3
CCDC9-205ENST00000600117 PNPLA3Q9NST1 481 aa16.94■□□□□ 0.3
CCDC9-205ENST00000600117 NDUFAF4Q9P032 175 aa16.94■□□□□ 0.3
CCDC9-205ENST00000600117 A4GNTQ9UNA3 340 aa16.94■□□□□ 0.3
CCDC9-205ENST00000600117 ANKHD1Q8IWZ3 2542 aaKnown RBP16.94■□□□□ 0.3
CCDC9-205ENST00000600117 A0A0J9YW62 118 aa16.93■□□□□ 0.3
CCDC9-205ENST00000600117 TCRBV3S1A0A5B6 114 aa16.93■□□□□ 0.3
CCDC9-205ENST00000600117 J3KTA2 159 aa16.93■□□□□ 0.3
CCDC9-205ENST00000600117 PRSS23O95084 383 aa16.93■□□□□ 0.3
CCDC9-205ENST00000600117 OR5F1O95221 314 aa16.93■□□□□ 0.3
CCDC9-205ENST00000600117 OPN1LWP04000 364 aa16.93■□□□□ 0.3
CCDC9-205ENST00000600117 TPOP07202 933 aa16.93■□□□□ 0.3
CCDC9-205ENST00000600117 CCNA2P20248 432 aa16.93■□□□□ 0.3
CCDC9-205ENST00000600117 YAP1P46937 504 aaKnown RBP16.93■□□□□ 0.3
CCDC9-205ENST00000600117 ALG10BQ5I7T1 473 aa16.93■□□□□ 0.3
CCDC9-205ENST00000600117 SWT1Q5T5J6 900 aaKnown RBP16.93■□□□□ 0.3
CCDC9-205ENST00000600117 CD163Q86VB7 1156 aa16.93■□□□□ 0.3
CCDC9-205ENST00000600117 UBQLNLQ8IYU4 475 aa16.93■□□□□ 0.3
CCDC9-205ENST00000600117 ATP6V1C2Q8NEY4 427 aa16.93■□□□□ 0.3
CCDC9-205ENST00000600117 SLC25A43Q8WUT9 341 aaPredicted RBP16.93■□□□□ 0.3
CCDC9-205ENST00000600117 POP5Q969H6 163 aaKnown RBP16.93■□□□□ 0.3
CCDC9-205ENST00000600117 SLC47A1Q96FL8 570 aa16.93■□□□□ 0.3
CCDC9-205ENST00000600117 SLC41A3Q96GZ6 507 aa16.93■□□□□ 0.3
CCDC9-205ENST00000600117 KLHL15Q96M94 604 aa16.93■□□□□ 0.3
CCDC9-205ENST00000600117 PRSS27Q9BQR3 290 aa16.93■□□□□ 0.3
CCDC9-205ENST00000600117 MAGIXQ9H6Y5 334 aa16.93■□□□□ 0.3
CCDC9-205ENST00000600117 RIMS3Q9UJD0 308 aa16.93■□□□□ 0.3
CCDC9-205ENST00000600117 CAMK2AQ9UQM7 478 aa16.93■□□□□ 0.3
CCDC9-205ENST00000600117 IGKV1D-42A0A075B6H8 117 aa16.92■□□□□ 0.3
CCDC9-205ENST00000600117 A0A087WUJ7 227 aa16.92■□□□□ 0.3
CCDC9-205ENST00000600117 ZC3H12DA2A288 527 aaKnown RBP16.92■□□□□ 0.3
CCDC9-205ENST00000600117 hCG_2039718K7EN88 272 aa16.92■□□□□ 0.3
CCDC9-205ENST00000600117 ADAMDEC1O15204 470 aa16.92■□□□□ 0.3
CCDC9-205ENST00000600117 SEC14L5O43304 696 aa16.92■□□□□ 0.3
CCDC9-205ENST00000600117 ZNF208O43345 1280 aa16.92■□□□□ 0.3
CCDC9-205ENST00000600117 CHP2O43745 196 aa16.92■□□□□ 0.3
CCDC9-205ENST00000600117 NPIPB7O75200 414 aa16.92■□□□□ 0.3
CCDC9-205ENST00000600117 FUT4P22083 530 aa16.92■□□□□ 0.3
CCDC9-205ENST00000600117 CXCR1P25024 350 aa16.92■□□□□ 0.3
CCDC9-205ENST00000600117 SFTPDP35247 375 aa16.92■□□□□ 0.3
CCDC9-205ENST00000600117 MAGEA2P43356 314 aa16.92■□□□□ 0.3
CCDC9-205ENST00000600117 MAP2K6P52564 334 aa16.92■□□□□ 0.3
CCDC9-205ENST00000600117 TAS2R41P59536 307 aa16.92■□□□□ 0.3
CCDC9-205ENST00000600117 SRYQ05066 204 aa16.92■□□□□ 0.3
CCDC9-205ENST00000600117 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.92■□□□□ 0.3
CCDC9-205ENST00000600117 TMEM176BQ3YBM2 270 aaPredicted RBP16.92■□□□□ 0.3
CCDC9-205ENST00000600117 SYT14P1Q58G82 188 aa16.92■□□□□ 0.3
CCDC9-205ENST00000600117 LINC00114Q6XXX2 140 aa16.92■□□□□ 0.3
CCDC9-205ENST00000600117 WDR88Q6ZMY6 472 aa16.92■□□□□ 0.3
CCDC9-205ENST00000600117 FJX1Q86VR8 437 aa16.92■□□□□ 0.3
CCDC9-205ENST00000600117 SPATA24Q86W54 205 aa16.92■□□□□ 0.3
CCDC9-205ENST00000600117 DOLPP1Q86YN1 238 aa16.92■□□□□ 0.3
CCDC9-205ENST00000600117 PM20D2Q8IYS1 436 aa16.92■□□□□ 0.3
CCDC9-205ENST00000600117 MEIOBQ8N635 442 aa16.92■□□□□ 0.3
CCDC9-205ENST00000600117 RELTQ969Z4 430 aa16.92■□□□□ 0.3
CCDC9-205ENST00000600117 ZNF300Q96RE9 604 aaPredicted RBP16.92■□□□□ 0.3
CCDC9-205ENST00000600117 SEPHS2Q99611 448 aa16.92■□□□□ 0.3
CCDC9-205ENST00000600117 OR11A1Q9GZK7 315 aa16.92■□□□□ 0.3
CCDC9-205ENST00000600117 COQ10BQ9H8M1 238 aa16.92■□□□□ 0.3
CCDC9-205ENST00000600117 IL1RAPQ9NPH3 570 aa16.92■□□□□ 0.3
CCDC9-205ENST00000600117 ITGB1BP2Q9UKP3 347 aa16.92■□□□□ 0.3
CCDC9-205ENST00000600117 SLC7A7Q9UM01 511 aa16.92■□□□□ 0.3
CCDC9-205ENST00000600117 SPIN1Q9Y657 262 aaPredicted RBP16.92■□□□□ 0.3
CCDC9-205ENST00000600117 ABCA2Q9BZC7 2435 aa16.91■□□□□ 0.3
CCDC9-205ENST00000600117 ELOA3DA6NLF2 546 aaPredicted RBP16.91■□□□□ 0.3
CCDC9-205ENST00000600117 CIB2O75838 187 aa16.91■□□□□ 0.3
CCDC9-205ENST00000600117 THRBP10828 461 aa16.91■□□□□ 0.3
CCDC9-205ENST00000600117 PNMTP11086 282 aa16.91■□□□□ 0.3
CCDC9-205ENST00000600117 NQO1P15559 274 aaKnown RBP16.91■□□□□ 0.3
CCDC9-205ENST00000600117 FKBP2P26885 142 aaKnown RBP16.91■□□□□ 0.3
CCDC9-205ENST00000600117 CLK1P49759 484 aaKnown RBP16.91■□□□□ 0.3
CCDC9-205ENST00000600117 CCNIQ14094 377 aa16.91■□□□□ 0.3
CCDC9-205ENST00000600117 ELOA3BQ3SY89 546 aa16.91■□□□□ 0.3
CCDC9-205ENST00000600117 C1orf146Q5VVC0 180 aa16.91■□□□□ 0.3
CCDC9-205ENST00000600117 ESPNLQ6ZVH7 1005 aa16.91■□□□□ 0.3
CCDC9-205ENST00000600117 PIWIL3Q7Z3Z3 882 aaKnown RBP16.91■□□□□ 0.3
CCDC9-205ENST00000600117 ADGRE4PQ86SQ3 457 aa16.91■□□□□ 0.3
CCDC9-205ENST00000600117 ZDHHC21Q8IVQ6 265 aa16.91■□□□□ 0.3
CCDC9-205ENST00000600117 OFCC1Q8IZS5 231 aa16.91■□□□□ 0.3
CCDC9-205ENST00000600117 ELOA3Q8NG57 546 aa16.91■□□□□ 0.3
CCDC9-205ENST00000600117 OR2V1Q8NHB1 315 aa16.91■□□□□ 0.3
CCDC9-205ENST00000600117 CANT1Q8WVQ1 401 aa16.91■□□□□ 0.3
CCDC9-205ENST00000600117 TUBA1CQ9BQE3 449 aa16.91■□□□□ 0.3
CCDC9-205ENST00000600117 MAN2C1Q9NTJ4 1040 aa16.91■□□□□ 0.3
CCDC9-205ENST00000600117 STOML1Q9UBI4 398 aa16.91■□□□□ 0.3
CCDC9-205ENST00000600117 TINAGQ9UJW2 476 aa16.91■□□□□ 0.3
CCDC9-205ENST00000600117 MPDZO75970 2070 aa16.91■□□□□ 0.3
CCDC9-205ENST00000600117 DNHD1Q96M86 4753 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms