RNA–Protein interactions for RNA: ENST00000599589.5

ARHGEF1-218, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-218ENST00000599589 WDR88Q6ZMY6 472 aa17.84■□□□□ 0.45
ARHGEF1-218ENST00000599589 DCUN1D3Q8IWE4 304 aa17.84■□□□□ 0.45
ARHGEF1-218ENST00000599589 OR2L2Q8NH16 312 aa17.84■□□□□ 0.45
ARHGEF1-218ENST00000599589 SLC25A38Q96DW6 304 aa17.84■□□□□ 0.45
ARHGEF1-218ENST00000599589 PRSS27Q9BQR3 290 aa17.84■□□□□ 0.45
ARHGEF1-218ENST00000599589 TMEM106CQ9BVX2 250 aa17.84■□□□□ 0.45
ARHGEF1-218ENST00000599589 CCDC86Q9H6F5 360 aaKnown RBP17.84■□□□□ 0.45
ARHGEF1-218ENST00000599589 MED11Q9P086 117 aa17.84■□□□□ 0.45
ARHGEF1-218ENST00000599589 ZNF443Q9Y2A4 671 aaPredicted RBP17.84■□□□□ 0.45
ARHGEF1-218ENST00000599589 ATG4BQ9Y4P1 393 aa17.84■□□□□ 0.45
ARHGEF1-218ENST00000599589 EMC8O43402 210 aa17.83■□□□□ 0.44
ARHGEF1-218ENST00000599589 UCHL1P09936 223 aa17.83■□□□□ 0.44
ARHGEF1-218ENST00000599589 GPR1P46091 355 aa17.83■□□□□ 0.44
ARHGEF1-218ENST00000599589 C2orf68Q2NKX9 166 aa17.83■□□□□ 0.44
ARHGEF1-218ENST00000599589 ZNF660Q6AZW8 331 aaPredicted RBP17.83■□□□□ 0.44
ARHGEF1-218ENST00000599589 OR9A2Q8NGT5 310 aa17.83■□□□□ 0.44
ARHGEF1-218ENST00000599589 ZDHHC1Q8WTX9 485 aa17.83■□□□□ 0.44
ARHGEF1-218ENST00000599589 ING5Q8WYH8 240 aa17.83■□□□□ 0.44
ARHGEF1-218ENST00000599589 TFGQ92734 400 aaPredicted RBP17.83■□□□□ 0.44
ARHGEF1-218ENST00000599589 ATOH1Q92858 354 aaPredicted RBP17.83■□□□□ 0.44
ARHGEF1-218ENST00000599589 PNPLA2Q96AD5 504 aa17.83■□□□□ 0.44
ARHGEF1-218ENST00000599589 CALML5Q9NZT1 146 aa17.83■□□□□ 0.44
ARHGEF1-218ENST00000599589 LAMA2P24043 3122 aaKnown RBP17.83■□□□□ 0.44
ARHGEF1-218ENST00000599589 LINC01553A4QN01 128 aa17.83■□□□□ 0.44
ARHGEF1-218ENST00000599589 SNAPC5O75971 98 aa17.83■□□□□ 0.44
ARHGEF1-218ENST00000599589 SYN1P17600 705 aa17.83■□□□□ 0.44
ARHGEF1-218ENST00000599589 CLDN12P56749 244 aa17.83■□□□□ 0.44
ARHGEF1-218ENST00000599589 H2BFSP57053 126 aa17.83■□□□□ 0.44
ARHGEF1-218ENST00000599589 RPS11P62280 158 aaKnown RBP eCLIP17.83■□□□□ 0.44
ARHGEF1-218ENST00000599589 SLC9A5Q14940 896 aa17.83■□□□□ 0.44
ARHGEF1-218ENST00000599589 C18orf63Q68DL7 685 aa17.83■□□□□ 0.44
ARHGEF1-218ENST00000599589 ZC3H14Q6PJT7 736 aaKnown RBP17.83■□□□□ 0.44
ARHGEF1-218ENST00000599589 PARS2Q7L3T8 475 aaKnown RBP17.83■□□□□ 0.44
ARHGEF1-218ENST00000599589 FCRLAQ7L513 359 aa17.83■□□□□ 0.44
ARHGEF1-218ENST00000599589 OVCH1Q7RTY7 1134 aa17.83■□□□□ 0.44
ARHGEF1-218ENST00000599589 CDH26Q8IXH8 852 aa17.83■□□□□ 0.44
ARHGEF1-218ENST00000599589 NRSN1Q8IZ57 195 aa17.83■□□□□ 0.44
ARHGEF1-218ENST00000599589 ARL14Q8N4G2 192 aa17.83■□□□□ 0.44
ARHGEF1-218ENST00000599589 EIF4E3Q8N5X7 224 aaKnown RBP17.83■□□□□ 0.44
ARHGEF1-218ENST00000599589 OPN4Q9UHM6 478 aa17.83■□□□□ 0.44
ARHGEF1-218ENST00000599589 ATPIF1Q9UII2 106 aa17.83■□□□□ 0.44
ARHGEF1-218ENST00000599589 GMEB2Q9UKD1 530 aa17.83■□□□□ 0.44
ARHGEF1-218ENST00000599589 ANKRD20A5PA0PJZ0 165 aa17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 HMSDA8MTL9 139 aa17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 C4orf51C9J302 202 aa17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 ZNF749O43361 778 aa17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 PCDH8O95206 1070 aa17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 SPDEFO95238 335 aa17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 IGF2P01344 180 aa17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 CEBPBP17676 345 aa17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 ARHGDIBP52566 201 aa17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 METAP1P53582 386 aa17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 DEFA5Q01523 94 aa17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 CRMP1Q14194 572 aa17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 DHCR24Q15392 516 aa17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 PUS10Q3MIT2 529 aaKnown RBP17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 ZNF836Q6ZNA1 936 aa17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 OR5M9Q8NGP3 310 aa17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 OR13C2Q8NGS9 318 aa17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 SMIM19Q96E16 107 aa17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 LRRC46Q96FV0 321 aa17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 SLC35A4Q96G79 324 aa17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 LRIG1Q96JA1 1093 aa17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 GFI1Q99684 422 aa17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 SLC25A18Q9H1K4 315 aa17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 NRIP3Q9NQ35 241 aa17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 ANKRD10Q9NXR5 420 aa17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 TAS2R10Q9NYW0 307 aa17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 CPNE7Q9UBL6 633 aa17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 ZNF223Q9UK11 482 aaPredicted RBP17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 C17orf113A0A1B0GUU1 675 aa17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 LRIT2A6NDA9 550 aa17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 SNRPGP15A8MWD9 76 aa17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 PAPLNO95428 1278 aa17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 SLC2A5P22732 501 aa17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 CDK5R1Q15078 307 aa17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 OLFML2AQ68BL7 652 aa17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 PAQR7Q86WK9 346 aa17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 HDDC3Q8N4P3 179 aa17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 RELL2Q8NC24 303 aaPredicted RBP17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 LILRB1Q8NHL6 650 aaPredicted RBP17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 HERVK_113Q902F9 699 aa17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 PDCD1LG2Q9BQ51 273 aa17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 CLDND1Q9NY35 253 aa17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 MRPS23Q9Y3D9 190 aaKnown RBP17.82■□□□□ 0.44
ARHGEF1-218ENST00000599589 CENPVL1A0A0U1RR11 272 aa17.81■□□□□ 0.44
ARHGEF1-218ENST00000599589 FMO6PO60774 539 aa17.81■□□□□ 0.44
ARHGEF1-218ENST00000599589 HPP00738 406 aa17.81■□□□□ 0.44
ARHGEF1-218ENST00000599589 IL5P05113 134 aa17.81■□□□□ 0.44
ARHGEF1-218ENST00000599589 VSIG10L2P0DP72 767 aa17.81■□□□□ 0.44
ARHGEF1-218ENST00000599589 ZNF35P13682 527 aa17.81■□□□□ 0.44
ARHGEF1-218ENST00000599589 PTH2RP49190 550 aa17.81■□□□□ 0.44
ARHGEF1-218ENST00000599589 VASPP50552 380 aaPredicted RBP17.81■□□□□ 0.44
ARHGEF1-218ENST00000599589 UBE2MP61081 183 aaKnown RBP17.81■□□□□ 0.44
ARHGEF1-218ENST00000599589 MAT1AQ00266 395 aaKnown RBP17.81■□□□□ 0.44
ARHGEF1-218ENST00000599589 FLI1Q01543 452 aaPredicted RBP17.81■□□□□ 0.44
ARHGEF1-218ENST00000599589 UBXN2BQ14CS0 331 aa17.81■□□□□ 0.44
ARHGEF1-218ENST00000599589 LTB4RQ15722 352 aa17.81■□□□□ 0.44
ARHGEF1-218ENST00000599589 STPG1Q5TH74 334 aa17.81■□□□□ 0.44
ARHGEF1-218ENST00000599589 FRRS1Q6ZNA5 592 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms