RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 NPAP1Q9NZP6 1156 aa20.22■□□□□ 0.83
CCDC61-207ENST00000599044 LIPT1Q9Y234 373 aa20.22■□□□□ 0.83
CCDC61-207ENST00000599044 TMED7-TICAM2A0A0A6YYA0 188 aa20.21■□□□□ 0.83
CCDC61-207ENST00000599044 TMEM72A0PK05 275 aa20.21■□□□□ 0.83
CCDC61-207ENST00000599044 IMPDH2P12268 514 aa20.21■□□□□ 0.83
CCDC61-207ENST00000599044 IDH3AP50213 366 aa20.21■□□□□ 0.83
CCDC61-207ENST00000599044 AQP5P55064 265 aa20.21■□□□□ 0.83
CCDC61-207ENST00000599044 FOXG1P55316 489 aaPredicted RBP20.21■□□□□ 0.83
CCDC61-207ENST00000599044 PDK3Q15120 406 aa20.21■□□□□ 0.83
CCDC61-207ENST00000599044 NXNQ6DKJ4 435 aa20.21■□□□□ 0.83
CCDC61-207ENST00000599044 DNAJC14Q6Y2X3 702 aaPredicted RBP20.21■□□□□ 0.83
CCDC61-207ENST00000599044 TRIML2Q8N7C3 387 aa20.21■□□□□ 0.83
CCDC61-207ENST00000599044 ZNF433Q8N7K0 673 aaPredicted RBP20.21■□□□□ 0.83
CCDC61-207ENST00000599044 EBF4Q9BQW3 602 aa20.21■□□□□ 0.83
CCDC61-207ENST00000599044 MTHFD2LQ9H903 347 aaPredicted RBP20.21■□□□□ 0.83
CCDC61-207ENST00000599044 NPHS2Q9NP85 383 aa20.21■□□□□ 0.83
CCDC61-207ENST00000599044 RLIMQ9NVW2 624 aa20.21■□□□□ 0.83
CCDC61-207ENST00000599044 OSGIN1Q9UJX0 560 aa20.21■□□□□ 0.83
CCDC61-207ENST00000599044 TMED7Q9Y3B3 224 aa20.21■□□□□ 0.83
CCDC61-207ENST00000599044 HDGFL3Q9Y3E1 203 aa20.21■□□□□ 0.83
CCDC61-207ENST00000599044 SPIN1Q9Y657 262 aaPredicted RBP20.21■□□□□ 0.83
CCDC61-207ENST00000599044 ZC3H12DA2A288 527 aaKnown RBP20.2■□□□□ 0.82
CCDC61-207ENST00000599044 OVOL3O00110 214 aa20.2■□□□□ 0.82
CCDC61-207ENST00000599044 NR2F1P10589 423 aa20.2■□□□□ 0.82
CCDC61-207ENST00000599044 TACR3P29371 465 aa20.2■□□□□ 0.82
CCDC61-207ENST00000599044 ATP5J2P56134 94 aa20.2■□□□□ 0.82
CCDC61-207ENST00000599044 OR2B6P58173 313 aa20.2■□□□□ 0.82
CCDC61-207ENST00000599044 SF3A3Q12874 501 aaKnown RBP eCLIP20.2■□□□□ 0.82
CCDC61-207ENST00000599044 PPA1Q15181 289 aa20.2■□□□□ 0.82
CCDC61-207ENST00000599044 ZNF672Q499Z4 452 aaPredicted RBP20.2■□□□□ 0.82
CCDC61-207ENST00000599044 GTDC1Q4AE62 458 aa20.2■□□□□ 0.82
CCDC61-207ENST00000599044 MRPL2Q5T653 305 aaKnown RBP20.2■□□□□ 0.82
CCDC61-207ENST00000599044 WDR60Q8WVS4 1066 aa20.2■□□□□ 0.82
CCDC61-207ENST00000599044 ZBTB18Q99592 522 aa20.2■□□□□ 0.82
CCDC61-207ENST00000599044 TRIM2Q9C040 744 aa20.2■□□□□ 0.82
CCDC61-207ENST00000599044 NGBQ9NPG2 151 aa20.2■□□□□ 0.82
CCDC61-207ENST00000599044 NOSIPQ9Y314 301 aaKnown RBP20.2■□□□□ 0.82
CCDC61-207ENST00000599044 MAGED1Q9Y5V3 778 aaPredicted RBP20.2■□□□□ 0.82
CCDC61-207ENST00000599044 RFXANKO14593 260 aa20.19■□□□□ 0.82
CCDC61-207ENST00000599044 SLC22A3O75751 556 aa20.19■□□□□ 0.82
CCDC61-207ENST00000599044 PGM3O95394 542 aa20.19■□□□□ 0.82
CCDC61-207ENST00000599044 TGDSO95455 350 aa20.19■□□□□ 0.82
CCDC61-207ENST00000599044 ETFAP13804 333 aa20.19■□□□□ 0.82
CCDC61-207ENST00000599044 SEC24CP53992 1094 aa20.19■□□□□ 0.82
CCDC61-207ENST00000599044 RPS4XP62701 263 aaKnown RBP20.19■□□□□ 0.82
CCDC61-207ENST00000599044 GNGT1P63211 74 aa20.19■□□□□ 0.82
CCDC61-207ENST00000599044 H3F3AP84243 136 aa20.19■□□□□ 0.82
CCDC61-207ENST00000599044 PGGHGQ32M88 737 aa20.19■□□□□ 0.82
CCDC61-207ENST00000599044 PDCD4Q53EL6 469 aaKnown RBP20.19■□□□□ 0.82
CCDC61-207ENST00000599044 FBXW9Q5XUX1 488 aa20.19■□□□□ 0.82
CCDC61-207ENST00000599044 VRK2Q86Y07 508 aa20.19■□□□□ 0.82
CCDC61-207ENST00000599044 CMIPQ8IY22 773 aa20.19■□□□□ 0.82
CCDC61-207ENST00000599044 GLB1L3Q8NCI6 653 aaPredicted RBP20.19■□□□□ 0.82
CCDC61-207ENST00000599044 SMAP2Q8WU79 429 aaPredicted RBP20.19■□□□□ 0.82
CCDC61-207ENST00000599044 FBXW5Q969U6 566 aa20.19■□□□□ 0.82
CCDC61-207ENST00000599044 USB1Q9BQ65 265 aaKnown RBP20.19■□□□□ 0.82
CCDC61-207ENST00000599044 TMEM181Q9P2C4 612 aa20.19■□□□□ 0.82
CCDC61-207ENST00000599044 DCTN4Q9UJW0 460 aa20.19■□□□□ 0.82
CCDC61-207ENST00000599044 GKN3PP0CG01 181 aa20.18■□□□□ 0.82
CCDC61-207ENST00000599044 IL7RP16871 459 aa20.18■□□□□ 0.82
CCDC61-207ENST00000599044 GGT1P19440 569 aa20.18■□□□□ 0.82
CCDC61-207ENST00000599044 LSP1P33241 339 aa20.18■□□□□ 0.82
CCDC61-207ENST00000599044 CDKN1AP38936 164 aa20.18■□□□□ 0.82
CCDC61-207ENST00000599044 CLK1P49759 484 aaKnown RBP20.18■□□□□ 0.82
CCDC61-207ENST00000599044 POLR2HP52434 150 aaKnown RBP20.18■□□□□ 0.82
CCDC61-207ENST00000599044 EPS8Q12929 822 aa20.18■□□□□ 0.82
CCDC61-207ENST00000599044 TIMM23BQ5SRD1 257 aa20.18■□□□□ 0.82
CCDC61-207ENST00000599044 UBE2J2Q8N2K1 259 aa20.18■□□□□ 0.82
CCDC61-207ENST00000599044 OR9I1Q8NGQ6 314 aa20.18■□□□□ 0.82
CCDC61-207ENST00000599044 AURKBQ96GD4 344 aaPredicted RBP20.18■□□□□ 0.82
CCDC61-207ENST00000599044 EMC3Q9P0I2 261 aa20.18■□□□□ 0.82
CCDC61-207ENST00000599044 TRAPPC4Q9Y296 219 aa20.18■□□□□ 0.82
CCDC61-207ENST00000599044 A0A1W2PR80 420 aa20.17■□□□□ 0.82
CCDC61-207ENST00000599044 OR5H1A6NKK0 313 aa20.17■□□□□ 0.82
CCDC61-207ENST00000599044 FAM171A2A8MVW0 826 aa20.17■□□□□ 0.82
CCDC61-207ENST00000599044 SHISA9B4DS77 424 aa20.17■□□□□ 0.82
CCDC61-207ENST00000599044 RAD51DO75771 328 aa20.17■□□□□ 0.82
CCDC61-207ENST00000599044 CD8AP01732 235 aa20.17■□□□□ 0.82
CCDC61-207ENST00000599044 IL6P05231 212 aa20.17■□□□□ 0.82
CCDC61-207ENST00000599044 DBIP07108 87 aaKnown RBP20.17■□□□□ 0.82
CCDC61-207ENST00000599044 IDO1P14902 403 aa20.17■□□□□ 0.82
CCDC61-207ENST00000599044 SLC1A3P43003 542 aa20.17■□□□□ 0.82
CCDC61-207ENST00000599044 HTR3AP46098 478 aa20.17■□□□□ 0.82
CCDC61-207ENST00000599044 SLC16A1P53985 500 aa20.17■□□□□ 0.82
CCDC61-207ENST00000599044 LRRC74AQ0VAA2 488 aa20.17■□□□□ 0.82
CCDC61-207ENST00000599044 TNK1Q13470 666 aa20.17■□□□□ 0.82
CCDC61-207ENST00000599044 PIGXQ8TBF5 258 aa20.17■□□□□ 0.82
CCDC61-207ENST00000599044 VPS33AQ96AX1 596 aa20.17■□□□□ 0.82
CCDC61-207ENST00000599044 APH1AQ96BI3 265 aa20.17■□□□□ 0.82
CCDC61-207ENST00000599044 ZHX1-C8orf76Q96EF9 292 aa20.17■□□□□ 0.82
CCDC61-207ENST00000599044 ADAM19Q9H013 955 aa20.17■□□□□ 0.82
CCDC61-207ENST00000599044 SDR39U1Q9NRG7 319 aaPredicted RBP20.17■□□□□ 0.82
CCDC61-207ENST00000599044 CFAP73A6NFT4 308 aa20.16■□□□□ 0.82
CCDC61-207ENST00000599044 FAAHO00519 579 aa20.16■□□□□ 0.82
CCDC61-207ENST00000599044 ZNF208O43345 1280 aa20.16■□□□□ 0.82
CCDC61-207ENST00000599044 DNPH1O43598 174 aa20.16■□□□□ 0.82
CCDC61-207ENST00000599044 TMCC2O75069 709 aa20.16■□□□□ 0.82
CCDC61-207ENST00000599044 NDUFS7O75251 213 aa20.16■□□□□ 0.82
CCDC61-207ENST00000599044 KRT75O95678 551 aa20.16■□□□□ 0.82
CCDC61-207ENST00000599044 TFPTP0C1Z6 253 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms