RNA–Protein interactions for RNA: ENST00000597995.1

TRIM28-212, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-212ENST00000597995 SLC35A5Q9BS91 424 aa11.03□□□□□ -0.64
TRIM28-212ENST00000597995 CACNG6Q9BXT2 260 aa11.03□□□□□ -0.64
TRIM28-212ENST00000597995 LAT2Q9GZY6 243 aa11.03□□□□□ -0.64
TRIM28-212ENST00000597995 SAP130Q9H0E3 1048 aa11.03□□□□□ -0.64
TRIM28-212ENST00000597995 SERINC1Q9NRX5 453 aa11.03□□□□□ -0.64
TRIM28-212ENST00000597995 SLC6A13Q9NSD5 602 aa11.03□□□□□ -0.64
TRIM28-212ENST00000597995 EMC3Q9P0I2 261 aa11.03□□□□□ -0.64
TRIM28-212ENST00000597995 PCDHGB4Q9UN71 923 aa11.03□□□□□ -0.64
TRIM28-212ENST00000597995 YLPM1P49750 1951 aaKnown RBP11.03□□□□□ -0.64
TRIM28-212ENST00000597995 TRPC5OSA6NMA1 111 aa11.02□□□□□ -0.65
TRIM28-212ENST00000597995 HMGN4O00479 90 aa11.02□□□□□ -0.65
TRIM28-212ENST00000597995 KIAA0513O60268 411 aa11.02□□□□□ -0.65
TRIM28-212ENST00000597995 H6PDO95479 791 aa11.02□□□□□ -0.65
TRIM28-212ENST00000597995 AK1P00568 194 aa11.02□□□□□ -0.65
TRIM28-212ENST00000597995 PGRP06401 933 aa11.02□□□□□ -0.65
TRIM28-212ENST00000597995 GUSBP08236 651 aa11.02□□□□□ -0.65
TRIM28-212ENST00000597995 EDNRAP25101 427 aa11.02□□□□□ -0.65
TRIM28-212ENST00000597995 THBS2P35442 1172 aa11.02□□□□□ -0.65
TRIM28-212ENST00000597995 DIO1P49895 249 aa11.02□□□□□ -0.65
TRIM28-212ENST00000597995 CSNK2A1P68400 391 aaPredicted RBP11.02□□□□□ -0.65
TRIM28-212ENST00000597995 RAB35Q15286 201 aa11.02□□□□□ -0.65
TRIM28-212ENST00000597995 DPY19L1Q2PZI1 675 aa11.02□□□□□ -0.65
TRIM28-212ENST00000597995 TIGD2Q4W5G0 525 aa11.02□□□□□ -0.65
TRIM28-212ENST00000597995 AGBL2Q5U5Z8 902 aa11.02□□□□□ -0.65
TRIM28-212ENST00000597995 KLHL17Q6TDP4 642 aa11.02□□□□□ -0.65
TRIM28-212ENST00000597995 FRRS1Q6ZNA5 592 aa11.02□□□□□ -0.65
TRIM28-212ENST00000597995 HMGN2P46Q86SG4 172 aa11.02□□□□□ -0.65
TRIM28-212ENST00000597995 MTDHQ86UE4 582 aaKnown RBP11.02□□□□□ -0.65
TRIM28-212ENST00000597995 RNF130Q86XS8 419 aa11.02□□□□□ -0.65
TRIM28-212ENST00000597995 FBXL14Q8N1E6 418 aa11.02□□□□□ -0.65
TRIM28-212ENST00000597995 DEPDC4Q8N2C3 294 aa11.02□□□□□ -0.65
TRIM28-212ENST00000597995 PIAS4Q8N2W9 510 aaPredicted RBP11.02□□□□□ -0.65
TRIM28-212ENST00000597995 TMCO5AQ8N6Q1 288 aa11.02□□□□□ -0.65
TRIM28-212ENST00000597995 FAM71CQ8NEG0 241 aa11.02□□□□□ -0.65
TRIM28-212ENST00000597995 VPS37AQ8NEZ2 397 aa11.02□□□□□ -0.65
TRIM28-212ENST00000597995 RFWD2Q8NHY2 731 aa11.02□□□□□ -0.65
TRIM28-212ENST00000597995 SLC25A43Q8WUT9 341 aaPredicted RBP11.02□□□□□ -0.65
TRIM28-212ENST00000597995 TMEM234Q8WY98 164 aa11.02□□□□□ -0.65
TRIM28-212ENST00000597995 ZNF775Q96BV0 537 aaPredicted RBP11.02□□□□□ -0.65
TRIM28-212ENST00000597995 ROPN1LQ96C74 230 aa11.02□□□□□ -0.65
TRIM28-212ENST00000597995 THUMPD3Q9BV44 507 aaKnown RBP11.02□□□□□ -0.65
TRIM28-212ENST00000597995 EXD2Q9NVH0 621 aa11.02□□□□□ -0.65
TRIM28-212ENST00000597995 NKIRAS1Q9NYS0 192 aa11.02□□□□□ -0.65
TRIM28-212ENST00000597995 LPAR3Q9UBY5 353 aa11.02□□□□□ -0.65
TRIM28-212ENST00000597995 SLC25A15Q9Y619 301 aa11.02□□□□□ -0.65
TRIM28-212ENST00000597995 CIB4A0PJX0 185 aa11.01□□□□□ -0.65
TRIM28-212ENST00000597995 CCDC154A6NI56 674 aa11.01□□□□□ -0.65
TRIM28-212ENST00000597995 CLDN24A6NM45 220 aa11.01□□□□□ -0.65
TRIM28-212ENST00000597995 H7C417 338 aa11.01□□□□□ -0.65
TRIM28-212ENST00000597995 SULT2B1O00204 365 aa11.01□□□□□ -0.65
TRIM28-212ENST00000597995 KLF11O14901 512 aa11.01□□□□□ -0.65
TRIM28-212ENST00000597995 GSNP06396 782 aa11.01□□□□□ -0.65
TRIM28-212ENST00000597995 PTNP21246 168 aa11.01□□□□□ -0.65
TRIM28-212ENST00000597995 CD40P25942 277 aa11.01□□□□□ -0.65
TRIM28-212ENST00000597995 PGM1P36871 562 aa11.01□□□□□ -0.65
TRIM28-212ENST00000597995 CCR4P51679 360 aa11.01□□□□□ -0.65
TRIM28-212ENST00000597995 SESN3P58005 492 aa11.01□□□□□ -0.65
TRIM28-212ENST00000597995 CHRNEQ04844 493 aa11.01□□□□□ -0.65
TRIM28-212ENST00000597995 MAPK11Q15759 364 aa11.01□□□□□ -0.65
TRIM28-212ENST00000597995 PDCD4Q53EL6 469 aaKnown RBP11.01□□□□□ -0.65
TRIM28-212ENST00000597995 SYT14P1Q58G82 188 aa11.01□□□□□ -0.65
TRIM28-212ENST00000597995 TTMPQ5BVD1 217 aa11.01□□□□□ -0.65
TRIM28-212ENST00000597995 COX20Q5RI15 118 aa11.01□□□□□ -0.65
TRIM28-212ENST00000597995 C1QTNF12Q5T7M4 302 aa11.01□□□□□ -0.65
TRIM28-212ENST00000597995 ABLIM2Q6H8Q1 611 aa11.01□□□□□ -0.65
TRIM28-212ENST00000597995 OR7E24Q6IFN5 339 aa11.01□□□□□ -0.65
TRIM28-212ENST00000597995 ZNF544Q6NX49 715 aa11.01□□□□□ -0.65
TRIM28-212ENST00000597995 SLC22A25Q6T423 547 aa11.01□□□□□ -0.65
TRIM28-212ENST00000597995 C16orf62Q7Z3J2 963 aa11.01□□□□□ -0.65
TRIM28-212ENST00000597995 MUC15Q8N387 334 aa11.01□□□□□ -0.65
TRIM28-212ENST00000597995 OIT3Q8WWZ8 545 aa11.01□□□□□ -0.65
TRIM28-212ENST00000597995 PROX1Q92786 737 aa11.01□□□□□ -0.65
TRIM28-212ENST00000597995 MUS81Q96NY9 551 aa11.01□□□□□ -0.65
TRIM28-212ENST00000597995 OR52E6Q96RD3 313 aa11.01□□□□□ -0.65
TRIM28-212ENST00000597995 KCNK17Q96T54 332 aa11.01□□□□□ -0.65
TRIM28-212ENST00000597995 BEX2Q9BXY8 128 aa11.01□□□□□ -0.65
TRIM28-212ENST00000597995 QRSL1Q9H0R6 528 aaKnown RBP11.01□□□□□ -0.65
TRIM28-212ENST00000597995 ACER3Q9NUN7 267 aa11.01□□□□□ -0.65
TRIM28-212ENST00000597995 TAS2R16Q9NYV7 291 aa11.01□□□□□ -0.65
TRIM28-212ENST00000597995 POU2F3Q9UKI9 436 aa11.01□□□□□ -0.65
TRIM28-212ENST00000597995 WDR45Q9Y484 360 aa11.01□□□□□ -0.65
TRIM28-212ENST00000597995 ZNF716A6NP11 495 aa11□□□□□ -0.65
TRIM28-212ENST00000597995 SLCO1B7G3V0H7 640 aa11□□□□□ -0.65
TRIM28-212ENST00000597995 GPR171O14626 319 aa11□□□□□ -0.65
TRIM28-212ENST00000597995 DNPH1O43598 174 aa11□□□□□ -0.65
TRIM28-212ENST00000597995 RAD51DO75771 328 aa11□□□□□ -0.65
TRIM28-212ENST00000597995 CSTAP01040 98 aa11□□□□□ -0.65
TRIM28-212ENST00000597995 CHRM4P08173 479 aa11□□□□□ -0.65
TRIM28-212ENST00000597995 CSF3P09919 207 aa11□□□□□ -0.65
TRIM28-212ENST00000597995 BMP4P12644 408 aa11□□□□□ -0.65
TRIM28-212ENST00000597995 PGCP20142 388 aa11□□□□□ -0.65
TRIM28-212ENST00000597995 FKBP2P26885 142 aaKnown RBP11□□□□□ -0.65
TRIM28-212ENST00000597995 CHI3L1P36222 383 aaPredicted RBP11□□□□□ -0.65
TRIM28-212ENST00000597995 KHKP50053 298 aa11□□□□□ -0.65
TRIM28-212ENST00000597995 FABP6P51161 128 aa11□□□□□ -0.65
TRIM28-212ENST00000597995 ZNF83P51522 516 aa11□□□□□ -0.65
TRIM28-212ENST00000597995 MVDP53602 400 aa11□□□□□ -0.65
TRIM28-212ENST00000597995 MERTKQ12866 999 aa11□□□□□ -0.65
TRIM28-212ENST00000597995 SYPL1Q16563 259 aa11□□□□□ -0.65
TRIM28-212ENST00000597995 CYB5R2Q6BCY4 276 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms