RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 DDIT4LQ96D03 193 aa14.91□□□□□ -0.02
SSBP4-204ENST00000597724 PSD2Q9BQI7 771 aa14.91□□□□□ -0.02
SSBP4-204ENST00000597724 ELOVL5Q9NYP7 299 aa14.91□□□□□ -0.02
SSBP4-204ENST00000597724 KLHL13Q9P2N7 655 aa14.91□□□□□ -0.02
SSBP4-204ENST00000597724 ING1Q9UK53 422 aaPredicted RBP14.91□□□□□ -0.02
SSBP4-204ENST00000597724 DNPH1O43598 174 aa14.9□□□□□ -0.02
SSBP4-204ENST00000597724 FESP07332 822 aa14.9□□□□□ -0.02
SSBP4-204ENST00000597724 EPXP11678 715 aa14.9□□□□□ -0.02
SSBP4-204ENST00000597724 DRD4P21917 467 aa14.9□□□□□ -0.02
SSBP4-204ENST00000597724 KRTAP10-9P60411 292 aa14.9□□□□□ -0.02
SSBP4-204ENST00000597724 DMTNQ08495 405 aa14.9□□□□□ -0.02
SSBP4-204ENST00000597724 RASGEF1BQ0VAM2 473 aa14.9□□□□□ -0.02
SSBP4-204ENST00000597724 TMEM201Q5SNT2 666 aa14.9□□□□□ -0.02
SSBP4-204ENST00000597724 BHLHE22Q8NFJ8 381 aaPredicted RBP14.9□□□□□ -0.02
SSBP4-204ENST00000597724 RP9Q8TA86 221 aaKnown RBP14.9□□□□□ -0.02
SSBP4-204ENST00000597724 C3orf49Q96BT1 292 aa14.9□□□□□ -0.02
SSBP4-204ENST00000597724 DNAJA3Q96EY1 480 aa14.9□□□□□ -0.02
SSBP4-204ENST00000597724 LURAP1Q96LR2 239 aa14.9□□□□□ -0.02
SSBP4-204ENST00000597724 TACO1Q9BSH4 297 aaKnown RBP14.9□□□□□ -0.02
SSBP4-204ENST00000597724 BCO1Q9HAY6 547 aa14.9□□□□□ -0.02
SSBP4-204ENST00000597724 GID8Q9NWU2 228 aa14.9□□□□□ -0.02
SSBP4-204ENST00000597724 TMEM181Q9P2C4 612 aa14.9□□□□□ -0.02
SSBP4-204ENST00000597724 KLHL9Q9P2J3 617 aa14.9□□□□□ -0.02
SSBP4-204ENST00000597724 ZC3H12DA2A288 527 aaKnown RBP14.89□□□□□ -0.03
SSBP4-204ENST00000597724 FAM221AA4D161 298 aa14.89□□□□□ -0.03
SSBP4-204ENST00000597724 GMNCA6NCL1 334 aa14.89□□□□□ -0.03
SSBP4-204ENST00000597724 M0QX08 132 aa14.89□□□□□ -0.03
SSBP4-204ENST00000597724 SNX3O60493 162 aa14.89□□□□□ -0.03
SSBP4-204ENST00000597724 COX4I1P13073 169 aa14.89□□□□□ -0.03
SSBP4-204ENST00000597724 POU2F1P14859 743 aa14.89□□□□□ -0.03
SSBP4-204ENST00000597724 PCGF2P35227 344 aa14.89□□□□□ -0.03
SSBP4-204ENST00000597724 KCNJ5P48544 419 aa14.89□□□□□ -0.03
SSBP4-204ENST00000597724 H3F3AP84243 136 aa14.89□□□□□ -0.03
SSBP4-204ENST00000597724 DAZAP2Q15038 168 aaPredicted RBP14.89□□□□□ -0.03
SSBP4-204ENST00000597724 VMACQ2NL98 169 aa14.89□□□□□ -0.03
SSBP4-204ENST00000597724 NUFIP2Q7Z417 695 aaKnown RBP14.89□□□□□ -0.03
SSBP4-204ENST00000597724 CALHM3Q86XJ0 350 aa14.89□□□□□ -0.03
SSBP4-204ENST00000597724 SLC30A8Q8IWU4 369 aa14.89□□□□□ -0.03
SSBP4-204ENST00000597724 POU5F2Q8N7G0 328 aa14.89□□□□□ -0.03
SSBP4-204ENST00000597724 LSMEM1Q8N8F7 131 aa14.89□□□□□ -0.03
SSBP4-204ENST00000597724 RCN3Q96D15 328 aa14.89□□□□□ -0.03
SSBP4-204ENST00000597724 ZHX1-C8orf76Q96EF9 292 aa14.89□□□□□ -0.03
SSBP4-204ENST00000597724 ECSITQ9BQ95 431 aa14.89□□□□□ -0.03
SSBP4-204ENST00000597724 POTEKPQ9BYX7 375 aa14.89□□□□□ -0.03
SSBP4-204ENST00000597724 FAM107BQ9H098 131 aa14.89□□□□□ -0.03
SSBP4-204ENST00000597724 PIF1Q9H611 641 aa14.89□□□□□ -0.03
SSBP4-204ENST00000597724 C12orf49Q9H741 205 aa14.89□□□□□ -0.03
SSBP4-204ENST00000597724 CSMD2Q7Z408 3487 aa14.88□□□□□ -0.03
SSBP4-204ENST00000597724 ZNF724A8MTY0 619 aa14.88□□□□□ -0.03
SSBP4-204ENST00000597724 IMPDH2P12268 514 aa14.88□□□□□ -0.03
SSBP4-204ENST00000597724 UGT2B10P36537 528 aa14.88□□□□□ -0.03
SSBP4-204ENST00000597724 OR2B6P58173 313 aa14.88□□□□□ -0.03
SSBP4-204ENST00000597724 BNIP2Q12982 314 aa14.88□□□□□ -0.03
SSBP4-204ENST00000597724 PDK3Q15120 406 aa14.88□□□□□ -0.03
SSBP4-204ENST00000597724 DUSP7Q16829 419 aa14.88□□□□□ -0.03
SSBP4-204ENST00000597724 EXOC3L2Q2M3D2 409 aa14.88□□□□□ -0.03
SSBP4-204ENST00000597724 INTS11Q5TA45 600 aaKnown RBP14.88□□□□□ -0.03
SSBP4-204ENST00000597724 ABLIM2Q6H8Q1 611 aa14.88□□□□□ -0.03
SSBP4-204ENST00000597724 BEND4Q6ZU67 534 aa14.88□□□□□ -0.03
SSBP4-204ENST00000597724 CPLX4Q7Z7G2 160 aa14.88□□□□□ -0.03
SSBP4-204ENST00000597724 PATL1Q86TB9 770 aaKnown RBP14.88□□□□□ -0.03
SSBP4-204ENST00000597724 ATG4DQ86TL0 474 aaPredicted RBP14.88□□□□□ -0.03
SSBP4-204ENST00000597724 STK32CQ86UX6 486 aa14.88□□□□□ -0.03
SSBP4-204ENST00000597724 TREML1Q86YW5 311 aa14.88□□□□□ -0.03
SSBP4-204ENST00000597724 SMYD1Q8NB12 490 aa14.88□□□□□ -0.03
SSBP4-204ENST00000597724 ZNF583Q96ND8 569 aa14.88□□□□□ -0.03
SSBP4-204ENST00000597724 DACH2Q96NX9 599 aa14.88□□□□□ -0.03
SSBP4-204ENST00000597724 WFDC6Q9BQY6 131 aa14.88□□□□□ -0.03
SSBP4-204ENST00000597724 TRIM2Q9C040 744 aa14.88□□□□□ -0.03
SSBP4-204ENST00000597724 NSRP1Q9H0G5 558 aaKnown RBP14.88□□□□□ -0.03
SSBP4-204ENST00000597724 MYLK2Q9H1R3 596 aa14.88□□□□□ -0.03
SSBP4-204ENST00000597724 EVA1AQ9H8M9 152 aa14.88□□□□□ -0.03
SSBP4-204ENST00000597724 KLHL28Q9NXS3 571 aa14.88□□□□□ -0.03
SSBP4-204ENST00000597724 NDRG3Q9UGV2 375 aa14.88□□□□□ -0.03
SSBP4-204ENST00000597724 FREM1Q5H8C1 2179 aa14.87□□□□□ -0.03
SSBP4-204ENST00000597724 IGKV3D-15A0A087WSY6 115 aa14.87□□□□□ -0.03
SSBP4-204ENST00000597724 SH3D21A4FU49 640 aa14.87□□□□□ -0.03
SSBP4-204ENST00000597724 A6NNC1 897 aa14.87□□□□□ -0.03
SSBP4-204ENST00000597724 ZNF716A6NP11 495 aa14.87□□□□□ -0.03
SSBP4-204ENST00000597724 A8MVM7 634 aa14.87□□□□□ -0.03
SSBP4-204ENST00000597724 TMEM229AB2RXF0 380 aa14.87□□□□□ -0.03
SSBP4-204ENST00000597724 ZNF814B7Z6K7 855 aa14.87□□□□□ -0.03
SSBP4-204ENST00000597724 C16orf97H3BN30 126 aa14.87□□□□□ -0.03
SSBP4-204ENST00000597724 EIF1BO60739 113 aaKnown RBP14.87□□□□□ -0.03
SSBP4-204ENST00000597724 NPIPB7O75200 414 aa14.87□□□□□ -0.03
SSBP4-204ENST00000597724 CTAG2O75638 210 aa14.87□□□□□ -0.03
SSBP4-204ENST00000597724 OPN1SWP03999 348 aa14.87□□□□□ -0.03
SSBP4-204ENST00000597724 C8BP07358 591 aa14.87□□□□□ -0.03
SSBP4-204ENST00000597724 FPR1P21462 350 aa14.87□□□□□ -0.03
SSBP4-204ENST00000597724 HTR2AP28223 471 aa14.87□□□□□ -0.03
SSBP4-204ENST00000597724 CCKARP32238 428 aa14.87□□□□□ -0.03
SSBP4-204ENST00000597724 RGS8P57771 180 aaPredicted RBP14.87□□□□□ -0.03
SSBP4-204ENST00000597724 GNGT1P63211 74 aa14.87□□□□□ -0.03
SSBP4-204ENST00000597724 SLC35A1P78382 337 aa14.87□□□□□ -0.03
SSBP4-204ENST00000597724 CCDC80Q76M96 950 aa14.87□□□□□ -0.03
SSBP4-204ENST00000597724 OR52E4Q8NGH9 312 aa14.87□□□□□ -0.03
SSBP4-204ENST00000597724 ZNF775Q96BV0 537 aaPredicted RBP14.87□□□□□ -0.03
SSBP4-204ENST00000597724 PRR14Q9BWN1 585 aa14.87□□□□□ -0.03
SSBP4-204ENST00000597724 C12orf10Q9HB07 376 aa14.87□□□□□ -0.03
SSBP4-204ENST00000597724 RPS6KB2Q9UBS0 482 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms