RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 ZNF443Q9Y2A4 671 aaPredicted RBP9.33□□□□□ -0.92
CCDC9-203ENST00000596938 MPDZO75970 2070 aa9.33□□□□□ -0.92
CCDC9-203ENST00000596938 ABCA4P78363 2273 aa9.33□□□□□ -0.92
CCDC9-203ENST00000596938 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.32□□□□□ -0.92
CCDC9-203ENST00000596938 A0A1W2PP18 115 aa9.32□□□□□ -0.92
CCDC9-203ENST00000596938 TMEM72A0PK05 275 aa9.32□□□□□ -0.92
CCDC9-203ENST00000596938 ZNF716A6NP11 495 aa9.32□□□□□ -0.92
CCDC9-203ENST00000596938 GPR171O14626 319 aa9.32□□□□□ -0.92
CCDC9-203ENST00000596938 PGM3O95394 542 aa9.32□□□□□ -0.92
CCDC9-203ENST00000596938 NUDT7P0C024 238 aa9.32□□□□□ -0.92
CCDC9-203ENST00000596938 CD99P14209 185 aa9.32□□□□□ -0.92
CCDC9-203ENST00000596938 ETS2P15036 469 aa9.32□□□□□ -0.92
CCDC9-203ENST00000596938 CCNA2P20248 432 aa9.32□□□□□ -0.92
CCDC9-203ENST00000596938 IL32P24001 234 aa9.32□□□□□ -0.92
CCDC9-203ENST00000596938 CXCR1P25024 350 aa9.32□□□□□ -0.92
CCDC9-203ENST00000596938 OR2B6P58173 313 aa9.32□□□□□ -0.92
CCDC9-203ENST00000596938 COPZ1P61923 177 aa9.32□□□□□ -0.92
CCDC9-203ENST00000596938 ADAM8P78325 824 aa9.32□□□□□ -0.92
CCDC9-203ENST00000596938 SLC35A1P78382 337 aa9.32□□□□□ -0.92
CCDC9-203ENST00000596938 SQLEQ14534 574 aa9.32□□□□□ -0.92
CCDC9-203ENST00000596938 AGKQ53H12 422 aa9.32□□□□□ -0.92
CCDC9-203ENST00000596938 PAGE3Q5JUK9 113 aa9.32□□□□□ -0.92
CCDC9-203ENST00000596938 WBP2NLQ6ICG8 309 aa9.32□□□□□ -0.92
CCDC9-203ENST00000596938 ZNF836Q6ZNA1 936 aa9.32□□□□□ -0.92
CCDC9-203ENST00000596938 C20orf204Q6ZNR8 217 aa9.32□□□□□ -0.92
CCDC9-203ENST00000596938 SSX8Q7RTT4 187 aa9.32□□□□□ -0.92
CCDC9-203ENST00000596938 MSRB3Q8IXL7 192 aa9.32□□□□□ -0.92
CCDC9-203ENST00000596938 BBS10Q8TAM1 723 aa9.32□□□□□ -0.92
CCDC9-203ENST00000596938 PIGXQ8TBF5 258 aa9.32□□□□□ -0.92
CCDC9-203ENST00000596938 S100PBPQ96BU1 408 aa9.32□□□□□ -0.92
CCDC9-203ENST00000596938 ZNF300Q96RE9 604 aaPredicted RBP9.32□□□□□ -0.92
CCDC9-203ENST00000596938 NAA11Q9BSU3 229 aaPredicted RBP9.32□□□□□ -0.92
CCDC9-203ENST00000596938 CACYBPQ9HB71 228 aaKnown RBP9.32□□□□□ -0.92
CCDC9-203ENST00000596938 NGBQ9NPG2 151 aa9.32□□□□□ -0.92
CCDC9-203ENST00000596938 CHST2Q9Y4C5 530 aa9.32□□□□□ -0.92
CCDC9-203ENST00000596938 ZNF469Q96JG9 3925 aaPredicted RBP9.32□□□□□ -0.92
CCDC9-203ENST00000596938 AKAP6Q13023 2319 aa9.31□□□□□ -0.92
CCDC9-203ENST00000596938 TRBV5-3A0A0A0MS03 114 aa9.31□□□□□ -0.92
CCDC9-203ENST00000596938 NR5A2O00482 541 aa9.31□□□□□ -0.92
CCDC9-203ENST00000596938 EDF1O60869 148 aaKnown RBP9.31□□□□□ -0.92
CCDC9-203ENST00000596938 GKN3PP0CG01 181 aa9.31□□□□□ -0.92
CCDC9-203ENST00000596938 IMPDH2P12268 514 aa9.31□□□□□ -0.92
CCDC9-203ENST00000596938 FOSL1P15407 271 aa9.31□□□□□ -0.92
CCDC9-203ENST00000596938 GPX2P18283 190 aa9.31□□□□□ -0.92
CCDC9-203ENST00000596938 NTF4P34130 210 aa9.31□□□□□ -0.92
CCDC9-203ENST00000596938 TAB1Q15750 504 aa9.31□□□□□ -0.92
CCDC9-203ENST00000596938 ZNF311Q5JNZ3 666 aa9.31□□□□□ -0.92
CCDC9-203ENST00000596938 RPS26P11Q5JNZ5 115 aaPredicted RBP9.31□□□□□ -0.92
CCDC9-203ENST00000596938 METTL21CQ5VZV1 264 aa9.31□□□□□ -0.92
CCDC9-203ENST00000596938 FBXW9Q5XUX1 488 aa9.31□□□□□ -0.92
CCDC9-203ENST00000596938 PAQR6Q6TCH4 344 aa9.31□□□□□ -0.92
CCDC9-203ENST00000596938 DLEU7Q6UYE1 221 aa9.31□□□□□ -0.92
CCDC9-203ENST00000596938 P2RY8Q86VZ1 359 aa9.31□□□□□ -0.92
CCDC9-203ENST00000596938 WFDC8Q8IUA0 241 aa9.31□□□□□ -0.92
CCDC9-203ENST00000596938 CCDC103Q8IW40 242 aa9.31□□□□□ -0.92
CCDC9-203ENST00000596938 ZNF100Q8IYN0 542 aa9.31□□□□□ -0.92
CCDC9-203ENST00000596938 LRRC75A-AS1Q8N1F1 130 aa9.31□□□□□ -0.92
CCDC9-203ENST00000596938 TSPEARQ8WU66 669 aa9.31□□□□□ -0.92
CCDC9-203ENST00000596938 MAL2Q969L2 176 aa9.31□□□□□ -0.92
CCDC9-203ENST00000596938 PLPPR2Q96GM1 343 aa9.31□□□□□ -0.92
CCDC9-203ENST00000596938 SIKE1Q9BRV8 207 aa9.31□□□□□ -0.92
CCDC9-203ENST00000596938 TMEM38AQ9H6F2 299 aa9.31□□□□□ -0.92
CCDC9-203ENST00000596938 UBTD1Q9HAC8 227 aa9.31□□□□□ -0.92
CCDC9-203ENST00000596938 PARPBPQ9NWS1 579 aa9.31□□□□□ -0.92
CCDC9-203ENST00000596938 VAPAQ9P0L0 249 aa9.31□□□□□ -0.92
CCDC9-203ENST00000596938 PRSS50Q9UI38 385 aa9.31□□□□□ -0.92
CCDC9-203ENST00000596938 TRIM33Q9UPN9 1127 aa9.31□□□□□ -0.92
CCDC9-203ENST00000596938 NOSIPQ9Y314 301 aaKnown RBP9.31□□□□□ -0.92
CCDC9-203ENST00000596938 PRRC2AP48634 2157 aaKnown RBP9.3□□□□□ -0.92
CCDC9-203ENST00000596938 ZC3H12DA2A288 527 aaKnown RBP9.3□□□□□ -0.92
CCDC9-203ENST00000596938 LIPT2A6NK58 231 aa9.3□□□□□ -0.92
CCDC9-203ENST00000596938 A8MVM7 634 aa9.3□□□□□ -0.92
CCDC9-203ENST00000596938 EVPLLA8MZ36 301 aa9.3□□□□□ -0.92
CCDC9-203ENST00000596938 C5orf58C9J3I9 102 aa9.3□□□□□ -0.92
CCDC9-203ENST00000596938 TMCC2O75069 709 aa9.3□□□□□ -0.92
CCDC9-203ENST00000596938 MRPL33O75394 65 aaKnown RBP9.3□□□□□ -0.92
CCDC9-203ENST00000596938 SASH3O75995 380 aa9.3□□□□□ -0.92
CCDC9-203ENST00000596938 GPIP06744 558 aa9.3□□□□□ -0.92
CCDC9-203ENST00000596938 ARAFP10398 606 aa9.3□□□□□ -0.92
CCDC9-203ENST00000596938 PRG2P13727 222 aa9.3□□□□□ -0.92
CCDC9-203ENST00000596938 NCF2P19878 526 aaPredicted RBP9.3□□□□□ -0.92
CCDC9-203ENST00000596938 COX5AP20674 150 aa9.3□□□□□ -0.92
CCDC9-203ENST00000596938 IGHV1-2P23083 117 aa9.3□□□□□ -0.92
CCDC9-203ENST00000596938 EDNRAP25101 427 aa9.3□□□□□ -0.92
CCDC9-203ENST00000596938 PRKAR1BP31321 381 aa9.3□□□□□ -0.92
CCDC9-203ENST00000596938 NKX6-1P78426 367 aaPredicted RBP9.3□□□□□ -0.92
CCDC9-203ENST00000596938 CDK6Q00534 326 aa9.3□□□□□ -0.92
CCDC9-203ENST00000596938 CEACAM7Q14002 265 aa9.3□□□□□ -0.92
CCDC9-203ENST00000596938 SLC17A1Q14916 467 aa9.3□□□□□ -0.92
CCDC9-203ENST00000596938 TSC22D1Q15714 1073 aa9.3□□□□□ -0.92
CCDC9-203ENST00000596938 TIMM23BQ5SRD1 257 aa9.3□□□□□ -0.92
CCDC9-203ENST00000596938 NCMAPQ5T1S8 102 aa9.3□□□□□ -0.92
CCDC9-203ENST00000596938 SHEQ5VZ18 495 aa9.3□□□□□ -0.92
CCDC9-203ENST00000596938 REEP3Q6NUK4 255 aa9.3□□□□□ -0.92
CCDC9-203ENST00000596938 ADAM5Q6NVV9 412 aa9.3□□□□□ -0.92
CCDC9-203ENST00000596938 ZNF704Q6ZNC4 412 aaPredicted RBP9.3□□□□□ -0.92
CCDC9-203ENST00000596938 BHLHA15Q7RTS1 189 aaPredicted RBP9.3□□□□□ -0.92
CCDC9-203ENST00000596938 DPP10Q8N608 796 aa9.3□□□□□ -0.92
CCDC9-203ENST00000596938 ZNF433Q8N7K0 673 aaPredicted RBP9.3□□□□□ -0.92
CCDC9-203ENST00000596938 STK35Q8TDR2 534 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms