RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 PDCD2Q16342 344 aaPredicted RBP13.98□□□□□ -0.17
LINC02560-201ENST00000596379 ELOA3BQ3SY89 546 aa13.98□□□□□ -0.17
LINC02560-201ENST00000596379 GPAT3Q53EU6 434 aa13.98□□□□□ -0.17
LINC02560-201ENST00000596379 C6orf52Q5T4I8 152 aa13.98□□□□□ -0.17
LINC02560-201ENST00000596379 ANXA8L1Q5VT79 327 aa13.98□□□□□ -0.17
LINC02560-201ENST00000596379 C9orf135Q5VTT2 229 aa13.98□□□□□ -0.17
LINC02560-201ENST00000596379 SAXO2Q658L1 398 aa13.98□□□□□ -0.17
LINC02560-201ENST00000596379 EMBQ6PCB8 327 aa13.98□□□□□ -0.17
LINC02560-201ENST00000596379 NUDCD3Q8IVD9 361 aa13.98□□□□□ -0.17
LINC02560-201ENST00000596379 ARFGAP2Q8N6H7 521 aa13.98□□□□□ -0.17
LINC02560-201ENST00000596379 ZNF525Q8N782 197 aa13.98□□□□□ -0.17
LINC02560-201ENST00000596379 WDR31Q8NA23 367 aa13.98□□□□□ -0.17
LINC02560-201ENST00000596379 ELOA3Q8NG57 546 aa13.98□□□□□ -0.17
LINC02560-201ENST00000596379 INPP5KQ9BT40 448 aa13.98□□□□□ -0.17
LINC02560-201ENST00000596379 TMEM181Q9P2C4 612 aa13.98□□□□□ -0.17
LINC02560-201ENST00000596379 MALT1Q9UDY8 824 aa13.98□□□□□ -0.17
LINC02560-201ENST00000596379 TRAPPC4Q9Y296 219 aa13.98□□□□□ -0.17
LINC02560-201ENST00000596379 TMED7-TICAM2A0A0A6YYA0 188 aa13.97□□□□□ -0.17
LINC02560-201ENST00000596379 WDR91A4D1P6 747 aa13.97□□□□□ -0.17
LINC02560-201ENST00000596379 PDLIM1O00151 329 aa13.97□□□□□ -0.17
LINC02560-201ENST00000596379 ETV4P43268 484 aa13.97□□□□□ -0.17
LINC02560-201ENST00000596379 PLAURQ03405 335 aa13.97□□□□□ -0.17
LINC02560-201ENST00000596379 ZNF544Q6NX49 715 aa13.97□□□□□ -0.17
LINC02560-201ENST00000596379 CASP12Q6UXS9 341 aa13.97□□□□□ -0.17
LINC02560-201ENST00000596379 ZNF781Q8N8C0 355 aa13.97□□□□□ -0.17
LINC02560-201ENST00000596379 VPS37AQ8NEZ2 397 aa13.97□□□□□ -0.17
LINC02560-201ENST00000596379 TMEM158Q8WZ71 300 aa13.97□□□□□ -0.17
LINC02560-201ENST00000596379 CNOT9Q92600 299 aaKnown RBP13.97□□□□□ -0.17
LINC02560-201ENST00000596379 ZIM3Q96PE6 472 aa13.97□□□□□ -0.17
LINC02560-201ENST00000596379 KCNK17Q96T54 332 aa13.97□□□□□ -0.17
LINC02560-201ENST00000596379 ROPN1BQ9BZX4 212 aaPredicted RBP13.97□□□□□ -0.17
LINC02560-201ENST00000596379 MANSC1Q9H8J5 431 aa13.97□□□□□ -0.17
LINC02560-201ENST00000596379 ROPN1Q9HAT0 212 aaPredicted RBP13.97□□□□□ -0.17
LINC02560-201ENST00000596379 EXOSC3Q9NQT5 275 aaKnown RBP13.97□□□□□ -0.17
LINC02560-201ENST00000596379 SLC7A10Q9NS82 523 aa13.97□□□□□ -0.17
LINC02560-201ENST00000596379 UPB1Q9UBR1 384 aa13.97□□□□□ -0.17
LINC02560-201ENST00000596379 TMED7Q9Y3B3 224 aa13.97□□□□□ -0.17
LINC02560-201ENST00000596379 ATP23Q9Y6H3 246 aa13.97□□□□□ -0.17
LINC02560-201ENST00000596379 TMEM72A0PK05 275 aa13.96□□□□□ -0.17
LINC02560-201ENST00000596379 H7C417 338 aa13.96□□□□□ -0.17
LINC02560-201ENST00000596379 AP3D1O14617 1153 aa13.96□□□□□ -0.17
LINC02560-201ENST00000596379 TYROBPO43914 113 aa13.96□□□□□ -0.17
LINC02560-201ENST00000596379 C1QCP02747 245 aa13.96□□□□□ -0.17
LINC02560-201ENST00000596379 FAM157CP0CG43 387 aa13.96□□□□□ -0.17
LINC02560-201ENST00000596379 IMPDH2P12268 514 aa13.96□□□□□ -0.17
LINC02560-201ENST00000596379 SLC25A16P16260 332 aa13.96□□□□□ -0.17
LINC02560-201ENST00000596379 CHI3L1P36222 383 aaPredicted RBP13.96□□□□□ -0.17
LINC02560-201ENST00000596379 HTR3AP46098 478 aa13.96□□□□□ -0.17
LINC02560-201ENST00000596379 KHKP50053 298 aa13.96□□□□□ -0.17
LINC02560-201ENST00000596379 SLC35A1P78382 337 aa13.96□□□□□ -0.17
LINC02560-201ENST00000596379 VLDLRP98155 873 aa13.96□□□□□ -0.17
LINC02560-201ENST00000596379 CASP8Q14790 479 aa13.96□□□□□ -0.17
LINC02560-201ENST00000596379 FAM168AQ92567 244 aa13.96□□□□□ -0.17
LINC02560-201ENST00000596379 NEURL3Q96EH8 262 aa13.96□□□□□ -0.17
LINC02560-201ENST00000596379 PKNOX2Q96KN3 472 aa13.96□□□□□ -0.17
LINC02560-201ENST00000596379 SLC35A5Q9BS91 424 aa13.96□□□□□ -0.17
LINC02560-201ENST00000596379 NAA11Q9BSU3 229 aaPredicted RBP13.96□□□□□ -0.17
LINC02560-201ENST00000596379 SLC17A5Q9NRA2 495 aa13.96□□□□□ -0.17
LINC02560-201ENST00000596379 PARPBPQ9NWS1 579 aa13.96□□□□□ -0.17
LINC02560-201ENST00000596379 MARCOQ9UEW3 520 aaPredicted RBP13.96□□□□□ -0.17
LINC02560-201ENST00000596379 OSGIN1Q9UJX0 560 aa13.96□□□□□ -0.17
LINC02560-201ENST00000596379 FLVCR1Q9Y5Y0 555 aa13.96□□□□□ -0.17
LINC02560-201ENST00000596379 ARFGEF3Q5TH69 2177 aa13.95□□□□□ -0.18
LINC02560-201ENST00000596379 HMGN4O00479 90 aa13.95□□□□□ -0.18
LINC02560-201ENST00000596379 PHF1O43189 567 aaPredicted RBP13.95□□□□□ -0.18
LINC02560-201ENST00000596379 EIF1BO60739 113 aaKnown RBP13.95□□□□□ -0.18
LINC02560-201ENST00000596379 TACR3P29371 465 aa13.95□□□□□ -0.18
LINC02560-201ENST00000596379 POLR2HP52434 150 aaKnown RBP13.95□□□□□ -0.18
LINC02560-201ENST00000596379 HPCAP84074 193 aa13.95□□□□□ -0.18
LINC02560-201ENST00000596379 SLC25A3Q00325 362 aa13.95□□□□□ -0.18
LINC02560-201ENST00000596379 CHRNB3Q05901 458 aa13.95□□□□□ -0.18
LINC02560-201ENST00000596379 SYPL1Q16563 259 aa13.95□□□□□ -0.18
LINC02560-201ENST00000596379 SPANXN4Q5MJ08 99 aa13.95□□□□□ -0.18
LINC02560-201ENST00000596379 TSPO2Q5TGU0 170 aa13.95□□□□□ -0.18
LINC02560-201ENST00000596379 ANKFN1Q8N957 763 aa13.95□□□□□ -0.18
LINC02560-201ENST00000596379 C10orf105Q8TEF2 133 aa13.95□□□□□ -0.18
LINC02560-201ENST00000596379 NANOS1Q8WY41 292 aaKnown RBP13.95□□□□□ -0.18
LINC02560-201ENST00000596379 TESCQ96BS2 214 aa13.95□□□□□ -0.18
LINC02560-201ENST00000596379 DDIT4LQ96D03 193 aa13.95□□□□□ -0.18
LINC02560-201ENST00000596379 BEX2Q9BXY8 128 aa13.95□□□□□ -0.18
LINC02560-201ENST00000596379 AMBRA1Q9C0C7 1298 aa13.95□□□□□ -0.18
LINC02560-201ENST00000596379 C20orf27Q9GZN8 174 aa13.95□□□□□ -0.18
LINC02560-201ENST00000596379 FKRPQ9H9S5 495 aa13.95□□□□□ -0.18
LINC02560-201ENST00000596379 DCTN4Q9UJW0 460 aa13.95□□□□□ -0.18
LINC02560-201ENST00000596379 CDC42EP3Q9UKI2 254 aa13.95□□□□□ -0.18
LINC02560-201ENST00000596379 SLC9A8Q9Y2E8 581 aa13.95□□□□□ -0.18
LINC02560-201ENST00000596379 ZC3H12DA2A288 527 aaKnown RBP13.94□□□□□ -0.18
LINC02560-201ENST00000596379 ZNF208O43345 1280 aa13.94□□□□□ -0.18
LINC02560-201ENST00000596379 MYZAPP0CAP1 466 aa13.94□□□□□ -0.18
LINC02560-201ENST00000596379 BMP4P12644 408 aa13.94□□□□□ -0.18
LINC02560-201ENST00000596379 APOBEC3AP31941 199 aaPredicted RBP13.94□□□□□ -0.18
LINC02560-201ENST00000596379 EFNA4P52798 201 aa13.94□□□□□ -0.18
LINC02560-201ENST00000596379 ABCE1P61221 599 aaKnown RBP13.94□□□□□ -0.18
LINC02560-201ENST00000596379 SLC17A1Q14916 467 aa13.94□□□□□ -0.18
LINC02560-201ENST00000596379 CHI3L2Q15782 390 aa13.94□□□□□ -0.18
LINC02560-201ENST00000596379 MALRD1Q5VYJ5 2156 aa13.94□□□□□ -0.18
LINC02560-201ENST00000596379 CYB5R2Q6BCY4 276 aa13.94□□□□□ -0.18
LINC02560-201ENST00000596379 RNF130Q86XS8 419 aa13.94□□□□□ -0.18
LINC02560-201ENST00000596379 C17orf78Q8N4C9 275 aa13.94□□□□□ -0.18
LINC02560-201ENST00000596379 PROX1Q92786 737 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms