RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 LSMEM1Q8N8F7 131 aa15.44■□□□□ 0.06
SHKBP1-212ENST00000596163 DNAJA4Q8WW22 397 aaPredicted RBP15.44■□□□□ 0.06
SHKBP1-212ENST00000596163 ZNF583Q96ND8 569 aa15.44■□□□□ 0.06
SHKBP1-212ENST00000596163 NAA11Q9BSU3 229 aaPredicted RBP15.44■□□□□ 0.06
SHKBP1-212ENST00000596163 C12orf10Q9HB07 376 aa15.44■□□□□ 0.06
SHKBP1-212ENST00000596163 PLSCR4Q9NRQ2 329 aa15.44■□□□□ 0.06
SHKBP1-212ENST00000596163 ELOVL5Q9NYP7 299 aa15.44■□□□□ 0.06
SHKBP1-212ENST00000596163 TESQ9UGI8 421 aaKnown RBP15.44■□□□□ 0.06
SHKBP1-212ENST00000596163 CLEC4AQ9UMR7 237 aa15.44■□□□□ 0.06
SHKBP1-212ENST00000596163 NAV2Q8IVL1 2488 aa15.43■□□□□ 0.06
SHKBP1-212ENST00000596163 FAM220BPB1ANY3 271 aa15.43■□□□□ 0.06
SHKBP1-212ENST00000596163 FRS3O43559 492 aa15.43■□□□□ 0.06
SHKBP1-212ENST00000596163 TPST1O60507 370 aa15.43■□□□□ 0.06
SHKBP1-212ENST00000596163 YES1P07947 543 aa15.43■□□□□ 0.06
SHKBP1-212ENST00000596163 KCNJ5P48544 419 aa15.43■□□□□ 0.06
SHKBP1-212ENST00000596163 DMTNQ08495 405 aa15.43■□□□□ 0.06
SHKBP1-212ENST00000596163 RASGEF1BQ0VAM2 473 aa15.43■□□□□ 0.06
SHKBP1-212ENST00000596163 SMYD1Q8NB12 490 aa15.43■□□□□ 0.06
SHKBP1-212ENST00000596163 OR2T12Q8NG77 320 aa15.43■□□□□ 0.06
SHKBP1-212ENST00000596163 ABHD3Q8WU67 409 aa15.43■□□□□ 0.06
SHKBP1-212ENST00000596163 C3orf49Q96BT1 292 aa15.43■□□□□ 0.06
SHKBP1-212ENST00000596163 C14orf79Q96F83 325 aa15.43■□□□□ 0.06
SHKBP1-212ENST00000596163 ARL5BQ96KC2 179 aa15.43■□□□□ 0.06
SHKBP1-212ENST00000596163 LRRC37BQ96QE4 947 aa15.43■□□□□ 0.06
SHKBP1-212ENST00000596163 CCT8L2Q96SF2 557 aa15.43■□□□□ 0.06
SHKBP1-212ENST00000596163 GPATCH1Q9BRR8 931 aaKnown RBP15.43■□□□□ 0.06
SHKBP1-212ENST00000596163 OR11A1Q9GZK7 315 aa15.43■□□□□ 0.06
SHKBP1-212ENST00000596163 KLHL13Q9P2N7 655 aa15.43■□□□□ 0.06
SHKBP1-212ENST00000596163 TUBAL3A6NHL2 446 aa15.42■□□□□ 0.06
SHKBP1-212ENST00000596163 ELOA3DA6NLF2 546 aaPredicted RBP15.42■□□□□ 0.06
SHKBP1-212ENST00000596163 CYTIPO60759 359 aa15.42■□□□□ 0.06
SHKBP1-212ENST00000596163 GCM2O75603 506 aaPredicted RBP15.42■□□□□ 0.06
SHKBP1-212ENST00000596163 LGI1O95970 557 aa15.42■□□□□ 0.06
SHKBP1-212ENST00000596163 CGAP01215 116 aa15.42■□□□□ 0.06
SHKBP1-212ENST00000596163 GPIP06744 558 aa15.42■□□□□ 0.06
SHKBP1-212ENST00000596163 FESP07332 822 aa15.42■□□□□ 0.06
SHKBP1-212ENST00000596163 PNMTP11086 282 aa15.42■□□□□ 0.06
SHKBP1-212ENST00000596163 IDUAP35475 653 aa15.42■□□□□ 0.06
SHKBP1-212ENST00000596163 NUDT2P50583 147 aa15.42■□□□□ 0.06
SHKBP1-212ENST00000596163 HOXC5Q00444 222 aa15.42■□□□□ 0.06
SHKBP1-212ENST00000596163 PDK3Q15120 406 aa15.42■□□□□ 0.06
SHKBP1-212ENST00000596163 ELOA3BQ3SY89 546 aa15.42■□□□□ 0.06
SHKBP1-212ENST00000596163 FAM91A1Q658Y4 838 aa15.42■□□□□ 0.06
SHKBP1-212ENST00000596163 ULK3Q6PHR2 472 aa15.42■□□□□ 0.06
SHKBP1-212ENST00000596163 C5orf46Q6UWT4 87 aa15.42■□□□□ 0.06
SHKBP1-212ENST00000596163 ATG4DQ86TL0 474 aaPredicted RBP15.42■□□□□ 0.06
SHKBP1-212ENST00000596163 ANKS4BQ8N8V4 417 aa15.42■□□□□ 0.06
SHKBP1-212ENST00000596163 ZNF610Q8N9Z0 462 aa15.42■□□□□ 0.06
SHKBP1-212ENST00000596163 ELOA3Q8NG57 546 aa15.42■□□□□ 0.06
SHKBP1-212ENST00000596163 PIGXQ8TBF5 258 aa15.42■□□□□ 0.06
SHKBP1-212ENST00000596163 STK35Q8TDR2 534 aa15.42■□□□□ 0.06
SHKBP1-212ENST00000596163 SLC47A1Q96FL8 570 aa15.42■□□□□ 0.06
SHKBP1-212ENST00000596163 TAPBPLQ9BX59 468 aa15.42■□□□□ 0.06
SHKBP1-212ENST00000596163 OPN3Q9H1Y3 402 aaPredicted RBP15.42■□□□□ 0.06
SHKBP1-212ENST00000596163 GALNT8Q9NY28 637 aa15.42■□□□□ 0.06
SHKBP1-212ENST00000596163 EMC3Q9P0I2 261 aa15.42■□□□□ 0.06
SHKBP1-212ENST00000596163 BAG5Q9UL15 447 aa15.42■□□□□ 0.06
SHKBP1-212ENST00000596163 HEATR5AQ86XA9 2040 aa15.41■□□□□ 0.06
SHKBP1-212ENST00000596163 IGHV3-15A0A0B4J1V0 119 aa15.41■□□□□ 0.06
SHKBP1-212ENST00000596163 ELOVL7A1L3X0 281 aa15.41■□□□□ 0.06
SHKBP1-212ENST00000596163 ZNF724A8MTY0 619 aa15.41■□□□□ 0.06
SHKBP1-212ENST00000596163 GPR171O14626 319 aa15.41■□□□□ 0.06
SHKBP1-212ENST00000596163 SMAD9O15198 467 aaKnown RBP15.41■□□□□ 0.06
SHKBP1-212ENST00000596163 FMO6PO60774 539 aa15.41■□□□□ 0.06
SHKBP1-212ENST00000596163 OPN1SWP03999 348 aa15.41■□□□□ 0.06
SHKBP1-212ENST00000596163 AGTR1P30556 359 aa15.41■□□□□ 0.06
SHKBP1-212ENST00000596163 CPOXP36551 454 aa15.41■□□□□ 0.06
SHKBP1-212ENST00000596163 CD79BP40259 229 aa15.41■□□□□ 0.06
SHKBP1-212ENST00000596163 DUSP7Q16829 419 aa15.41■□□□□ 0.06
SHKBP1-212ENST00000596163 GLIPR1L2Q4G1C9 344 aa15.41■□□□□ 0.06
SHKBP1-212ENST00000596163 GKAP1Q5VSY0 366 aaPredicted RBP15.41■□□□□ 0.06
SHKBP1-212ENST00000596163 BEND4Q6ZU67 534 aa15.41■□□□□ 0.06
SHKBP1-212ENST00000596163 TUSC5Q8IXB3 177 aa15.41■□□□□ 0.06
SHKBP1-212ENST00000596163 SLC15A3Q8IY34 581 aa15.41■□□□□ 0.06
SHKBP1-212ENST00000596163 MICU2Q8IYU8 434 aa15.41■□□□□ 0.06
SHKBP1-212ENST00000596163 FAM222BQ8WU58 562 aa15.41■□□□□ 0.06
SHKBP1-212ENST00000596163 PROX1Q92786 737 aa15.41■□□□□ 0.06
SHKBP1-212ENST00000596163 BCO1Q9HAY6 547 aa15.41■□□□□ 0.06
SHKBP1-212ENST00000596163 CMTM6Q9NX76 183 aa15.41■□□□□ 0.06
SHKBP1-212ENST00000596163 FAM53CQ9NYF3 392 aa15.41■□□□□ 0.06
SHKBP1-212ENST00000596163 NDRG3Q9UGV2 375 aa15.41■□□□□ 0.06
SHKBP1-212ENST00000596163 SLC9A8Q9Y2E8 581 aa15.41■□□□□ 0.06
SHKBP1-212ENST00000596163 CACNA1CQ13936 2221 aa15.41■□□□□ 0.06
SHKBP1-212ENST00000596163 DOCK7Q96N67 2140 aa15.41■□□□□ 0.06
SHKBP1-212ENST00000596163 KIAA1549Q9HCM3 1950 aa15.4■□□□□ 0.06
SHKBP1-212ENST00000596163 A0A1B0GWA3 101 aa15.4■□□□□ 0.06
SHKBP1-212ENST00000596163 CCT8L1PA6NM43 557 aa15.4■□□□□ 0.06
SHKBP1-212ENST00000596163 AHSA1O95433 338 aa15.4■□□□□ 0.06
SHKBP1-212ENST00000596163 FAM107AO95990 144 aa15.4■□□□□ 0.06
SHKBP1-212ENST00000596163 POU2F1P14859 743 aa15.4■□□□□ 0.06
SHKBP1-212ENST00000596163 LIPEQ05469 1076 aa15.4■□□□□ 0.06
SHKBP1-212ENST00000596163 OR1Q1Q15612 314 aa15.4■□□□□ 0.06
SHKBP1-212ENST00000596163 NRF1Q16656 503 aa15.4■□□□□ 0.06
SHKBP1-212ENST00000596163 ALG10BQ5I7T1 473 aa15.4■□□□□ 0.06
SHKBP1-212ENST00000596163 C1orf140Q5VVS0 124 aa15.4■□□□□ 0.06
SHKBP1-212ENST00000596163 ZNF474Q6S9Z5 364 aaPredicted RBP15.4■□□□□ 0.06
SHKBP1-212ENST00000596163 C6orf89Q6UWU4 347 aa15.4■□□□□ 0.06
SHKBP1-212ENST00000596163 RNF217Q8TC41 542 aa15.4■□□□□ 0.06
SHKBP1-212ENST00000596163 TAMM41Q96BW9 452 aa15.4■□□□□ 0.06
SHKBP1-212ENST00000596163 MCHR1Q99705 422 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms