RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 KRT4P19013 534 aa8.7□□□□□ -1.02
LIG1-209ENST00000596104 HNF1AP20823 631 aa8.7□□□□□ -1.02
LIG1-209ENST00000596104 FKBP2P26885 142 aaKnown RBP8.7□□□□□ -1.02
LIG1-209ENST00000596104 MPGP29372 298 aa8.7□□□□□ -1.02
LIG1-209ENST00000596104 ARRB2P32121 409 aa8.7□□□□□ -1.02
LIG1-209ENST00000596104 RYKP34925 604 aa8.7□□□□□ -1.02
LIG1-209ENST00000596104 SOAT1P35610 550 aa8.7□□□□□ -1.02
LIG1-209ENST00000596104 MAGEA8P43361 318 aa8.7□□□□□ -1.02
LIG1-209ENST00000596104 OR2B6P58173 313 aa8.7□□□□□ -1.02
LIG1-209ENST00000596104 TGFBR3Q03167 851 aa8.7□□□□□ -1.02
LIG1-209ENST00000596104 FUT5Q11128 374 aa8.7□□□□□ -1.02
LIG1-209ENST00000596104 SQLEQ14534 574 aa8.7□□□□□ -1.02
LIG1-209ENST00000596104 SLC17A1Q14916 467 aa8.7□□□□□ -1.02
LIG1-209ENST00000596104 ATP6AP1LQ52LC2 224 aa8.7□□□□□ -1.02
LIG1-209ENST00000596104 IL23RQ5VWK5 629 aa8.7□□□□□ -1.02
LIG1-209ENST00000596104 TYW3Q6IPR3 259 aaKnown RBP8.7□□□□□ -1.02
LIG1-209ENST00000596104 IFT20Q8IY31 132 aa8.7□□□□□ -1.02
LIG1-209ENST00000596104 CLECL1Q8IZS7 167 aa8.7□□□□□ -1.02
LIG1-209ENST00000596104 C4orf33Q8N1A6 199 aa8.7□□□□□ -1.02
LIG1-209ENST00000596104 ZNF563Q8TA94 476 aa8.7□□□□□ -1.02
LIG1-209ENST00000596104 MIPOL1Q8TD10 442 aa8.7□□□□□ -1.02
LIG1-209ENST00000596104 C3orf49Q96BT1 292 aa8.7□□□□□ -1.02
LIG1-209ENST00000596104 ZG16BQ96DA0 208 aa8.7□□□□□ -1.02
LIG1-209ENST00000596104 BOD1Q96IK1 185 aa8.7□□□□□ -1.02
LIG1-209ENST00000596104 PRPF18Q99633 342 aaKnown RBP8.7□□□□□ -1.02
LIG1-209ENST00000596104 SOX7Q9BT81 388 aa8.7□□□□□ -1.02
LIG1-209ENST00000596104 DUSP26Q9BV47 211 aa8.7□□□□□ -1.02
LIG1-209ENST00000596104 SAP130Q9H0E3 1048 aa8.7□□□□□ -1.02
LIG1-209ENST00000596104 EXOSC3Q9NQT5 275 aaKnown RBP8.7□□□□□ -1.02
LIG1-209ENST00000596104 TMEM181Q9P2C4 612 aa8.7□□□□□ -1.02
LIG1-209ENST00000596104 TRAPPC4Q9Y296 219 aa8.7□□□□□ -1.02
LIG1-209ENST00000596104 SLC35A3Q9Y2D2 325 aa8.7□□□□□ -1.02
LIG1-209ENST00000596104 SLC9A8Q9Y2E8 581 aa8.7□□□□□ -1.02
LIG1-209ENST00000596104 SVEP1Q4LDE5 3571 aa8.7□□□□□ -1.02
LIG1-209ENST00000596104 MALRD1Q5VYJ5 2156 aa8.69□□□□□ -1.02
LIG1-209ENST00000596104 IGHV1-18A0A0C4DH31 117 aa8.69□□□□□ -1.02
LIG1-209ENST00000596104 LOC390937A0A1W2PQ73 354 aa8.69□□□□□ -1.02
LIG1-209ENST00000596104 CLDN24A6NM45 220 aa8.69□□□□□ -1.02
LIG1-209ENST00000596104 SLU7O95391 586 aaKnown RBP8.69□□□□□ -1.02
LIG1-209ENST00000596104 TGFAP01135 160 aa8.69□□□□□ -1.02
LIG1-209ENST00000596104 G6PDP11413 515 aa8.69□□□□□ -1.02
LIG1-209ENST00000596104 ZNF23P17027 643 aa8.69□□□□□ -1.02
LIG1-209ENST00000596104 CCNA2P20248 432 aa8.69□□□□□ -1.02
LIG1-209ENST00000596104 ALDH3A1P30838 453 aa8.69□□□□□ -1.02
LIG1-209ENST00000596104 CLDN8P56748 225 aa8.69□□□□□ -1.02
LIG1-209ENST00000596104 PRPS1P60891 318 aa8.69□□□□□ -1.02
LIG1-209ENST00000596104 ZSWIM7Q19AV6 140 aa8.69□□□□□ -1.02
LIG1-209ENST00000596104 CR1LQ2VPA4 569 aa8.69□□□□□ -1.02
LIG1-209ENST00000596104 LIPNQ5VXI9 398 aa8.69□□□□□ -1.02
LIG1-209ENST00000596104 FRRS1Q6ZNA5 592 aa8.69□□□□□ -1.02
LIG1-209ENST00000596104 C16orf62Q7Z3J2 963 aa8.69□□□□□ -1.02
LIG1-209ENST00000596104 GSPT2Q8IYD1 628 aaKnown RBP8.69□□□□□ -1.02
LIG1-209ENST00000596104 ANKS4BQ8N8V4 417 aa8.69□□□□□ -1.02
LIG1-209ENST00000596104 ZIC4Q8N9L1 334 aa8.69□□□□□ -1.02
LIG1-209ENST00000596104 FNDC5Q8NAU1 212 aa8.69□□□□□ -1.02
LIG1-209ENST00000596104 AGR3Q8TD06 166 aa8.69□□□□□ -1.02
LIG1-209ENST00000596104 TMEM45BQ96B21 275 aa8.69□□□□□ -1.02
LIG1-209ENST00000596104 C1orf159Q96HA4 380 aa8.69□□□□□ -1.02
LIG1-209ENST00000596104 SLC35G5Q96KT7 338 aa8.69□□□□□ -1.02
LIG1-209ENST00000596104 MECRQ9BV79 373 aa8.69□□□□□ -1.02
LIG1-209ENST00000596104 BPESC1Q9GZL8 116 aa8.69□□□□□ -1.02
LIG1-209ENST00000596104 OR51I1Q9H343 314 aa8.69□□□□□ -1.02
LIG1-209ENST00000596104 MYOZ1Q9NP98 299 aaPredicted RBP8.69□□□□□ -1.02
LIG1-209ENST00000596104 POLE3Q9NRF9 147 aa8.69□□□□□ -1.02
LIG1-209ENST00000596104 EXD2Q9NVH0 621 aa8.69□□□□□ -1.02
LIG1-209ENST00000596104 PARPBPQ9NWS1 579 aa8.69□□□□□ -1.02
LIG1-209ENST00000596104 MKS1Q9NXB0 559 aa8.69□□□□□ -1.02
LIG1-209ENST00000596104 UPB1Q9UBR1 384 aa8.69□□□□□ -1.02
LIG1-209ENST00000596104 WDR45Q9Y484 360 aa8.69□□□□□ -1.02
LIG1-209ENST00000596104 YLPM1P49750 1951 aaKnown RBP8.69□□□□□ -1.02
LIG1-209ENST00000596104 TMED7-TICAM2A0A0A6YYA0 188 aa8.68□□□□□ -1.02
LIG1-209ENST00000596104 TMEM72A0PK05 275 aa8.68□□□□□ -1.02
LIG1-209ENST00000596104 ZC3H12DA2A288 527 aaKnown RBP8.68□□□□□ -1.02
LIG1-209ENST00000596104 PRAMEF27A3QJZ7 478 aa8.68□□□□□ -1.02
LIG1-209ENST00000596104 LRP5LA4QPB2 252 aa8.68□□□□□ -1.02
LIG1-209ENST00000596104 SMIM23A6NLE4 172 aa8.68□□□□□ -1.02
LIG1-209ENST00000596104 RNASET2O00584 256 aaKnown RBP8.68□□□□□ -1.02
LIG1-209ENST00000596104 AP3D1O14617 1153 aa8.68□□□□□ -1.02
LIG1-209ENST00000596104 KLF11O14901 512 aa8.68□□□□□ -1.02
LIG1-209ENST00000596104 ZNF208O43345 1280 aa8.68□□□□□ -1.02
LIG1-209ENST00000596104 EIF1BO60739 113 aaKnown RBP8.68□□□□□ -1.02
LIG1-209ENST00000596104 SCN2BO60939 215 aa8.68□□□□□ -1.02
LIG1-209ENST00000596104 WNT11O96014 354 aa8.68□□□□□ -1.02
LIG1-209ENST00000596104 OR12D1P0DN82 309 aa8.68□□□□□ -1.02
LIG1-209ENST00000596104 SERPINF1P36955 418 aa8.68□□□□□ -1.02
LIG1-209ENST00000596104 IDH2P48735 452 aaKnown RBP8.68□□□□□ -1.02
LIG1-209ENST00000596104 SNRPD2P62316 118 aaKnown RBP8.68□□□□□ -1.02
LIG1-209ENST00000596104 SLC35A1P78382 337 aa8.68□□□□□ -1.02
LIG1-209ENST00000596104 KCNJ10P78508 379 aa8.68□□□□□ -1.02
LIG1-209ENST00000596104 ADIPOQQ15848 244 aa8.68□□□□□ -1.02
LIG1-209ENST00000596104 CARTPTQ16568 116 aa8.68□□□□□ -1.02
LIG1-209ENST00000596104 HIKESHIQ53FT3 197 aa8.68□□□□□ -1.02
LIG1-209ENST00000596104 OR4F3Q6IEY1 312 aa8.68□□□□□ -1.02
LIG1-209ENST00000596104 TNFAIP8L2Q6P589 184 aaPredicted RBP8.68□□□□□ -1.02
LIG1-209ENST00000596104 PAQR6Q6TCH4 344 aa8.68□□□□□ -1.02
LIG1-209ENST00000596104 HMGN2P46Q86SG4 172 aa8.68□□□□□ -1.02
LIG1-209ENST00000596104 MEX3DQ86XN8 651 aaKnown RBP8.68□□□□□ -1.02
LIG1-209ENST00000596104 RFLNBQ8N5W9 214 aa8.68□□□□□ -1.02
LIG1-209ENST00000596104 ARFGAP2Q8N6H7 521 aa8.68□□□□□ -1.02
LIG1-209ENST00000596104 EPS8L3Q8TE67 593 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms