RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 DTNBP1Q96EV8 351 aa11.85□□□□□ -0.51
SHKBP1-209ENST00000595803 C5orf34Q96MH7 638 aa11.85□□□□□ -0.51
SHKBP1-209ENST00000595803 SIGLEC12Q96PQ1 595 aa11.85□□□□□ -0.51
SHKBP1-209ENST00000595803 ADI1Q9BV57 179 aa11.85□□□□□ -0.51
SHKBP1-209ENST00000595803 RNF32Q9H0A6 362 aa11.85□□□□□ -0.51
SHKBP1-209ENST00000595803 MED17Q9NVC6 651 aa11.85□□□□□ -0.51
SHKBP1-209ENST00000595803 FAM118AQ9NWS6 357 aa11.85□□□□□ -0.51
SHKBP1-209ENST00000595803 OSGIN1Q9UJX0 560 aa11.85□□□□□ -0.51
SHKBP1-209ENST00000595803 VDAC3Q9Y277 283 aa11.85□□□□□ -0.51
SHKBP1-209ENST00000595803 TMEM5Q9Y2B1 443 aa11.85□□□□□ -0.51
SHKBP1-209ENST00000595803 TMED7Q9Y3B3 224 aa11.85□□□□□ -0.51
SHKBP1-209ENST00000595803 AP4B1Q9Y6B7 739 aa11.85□□□□□ -0.51
SHKBP1-209ENST00000595803 DOCK10Q96BY6 2186 aa11.85□□□□□ -0.51
SHKBP1-209ENST00000595803 OTOGQ6ZRI0 2925 aa11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 A0A087WZY1 265 aa11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 HTR3EA5X5Y0 456 aa11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 H0YAE9 185 aa11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 KPNA4O00629 521 aaPredicted RBP11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 DENRO43583 198 aaKnown RBP11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 PIP5K1CO60331 668 aa11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 TRIM3O75382 744 aaPredicted RBP11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 SLC25A12O75746 678 aa11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 NEURL1O76050 574 aa11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 SP1P08047 785 aa11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 OSMP13725 252 aa11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 PRKCAP17252 672 aa11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 HK1P19367 917 aa11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 PTNP21246 168 aa11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 APOBEC1P41238 236 aaKnown RBP11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 CTBP2P56545 445 aa11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 DSCR4P56555 118 aaPredicted RBP11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 LSM11P83369 360 aaKnown RBP eCLIP11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 CRYZQ08257 329 aaKnown RBP11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 NPRL3Q12980 569 aa11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 TSPAN31Q12999 210 aa11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 MED21Q13503 144 aa11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 POMZP3Q6PJE2 187 aa11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 KLHL17Q6TDP4 642 aa11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 ARSKQ6UWY0 536 aa11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 CD300LDQ6UXZ3 194 aa11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 MEX3DQ86XN8 651 aaKnown RBP11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 PFN4Q8NHR9 129 aa11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 TFAP2CQ92754 450 aa11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 ZNF524Q96C55 264 aa11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 SGTBQ96EQ0 304 aa11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 C1GALT1C1Q96EU7 318 aa11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 FAM46AQ96IP4 442 aaKnown RBP11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 GNRHR2Q96P88 292 aa11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 MBOAT4Q96T53 435 aa11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 FAM173AQ9BQD7 235 aa11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 TMEM43Q9BTV4 400 aa11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 SLC19A3Q9BZV2 496 aa11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 SERINC1Q9NRX5 453 aa11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 FBXL2Q9UKC9 423 aa11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 BOKQ9UMX3 212 aaPredicted RBP11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 POLQO75417 2590 aa11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 HEATR5AQ86XA9 2040 aa11.84□□□□□ -0.51
SHKBP1-209ENST00000595803 LOC100130705A0A1B0GUX0 176 aa11.83□□□□□ -0.52
SHKBP1-209ENST00000595803 UNC119BA6NIH7 251 aa11.83□□□□□ -0.52
SHKBP1-209ENST00000595803 EFCAB9A8MZ26 197 aa11.83□□□□□ -0.52
SHKBP1-209ENST00000595803 KLRC4-KLRK1H3BQV0 150 aa11.83□□□□□ -0.52
SHKBP1-209ENST00000595803 MST1P26927 711 aa11.83□□□□□ -0.52
SHKBP1-209ENST00000595803 DPP4P27487 766 aa11.83□□□□□ -0.52
SHKBP1-209ENST00000595803 POU1F1P28069 291 aa11.83□□□□□ -0.52
SHKBP1-209ENST00000595803 POLR2IP36954 125 aaKnown RBP11.83□□□□□ -0.52
SHKBP1-209ENST00000595803 EIF1P41567 113 aaKnown RBP11.83□□□□□ -0.52
SHKBP1-209ENST00000595803 GPR4P46093 362 aa11.83□□□□□ -0.52
SHKBP1-209ENST00000595803 GSSP48637 474 aa11.83□□□□□ -0.52
SHKBP1-209ENST00000595803 CRISP1P54107 249 aa11.83□□□□□ -0.52
SHKBP1-209ENST00000595803 TPD52P55327 224 aaPredicted RBP11.83□□□□□ -0.52
SHKBP1-209ENST00000595803 GPR85P60893 370 aa11.83□□□□□ -0.52
SHKBP1-209ENST00000595803 ESRRGP62508 458 aa11.83□□□□□ -0.52
SHKBP1-209ENST00000595803 ADARB1P78563 741 aaKnown RBP11.83□□□□□ -0.52
SHKBP1-209ENST00000595803 TOMM20Q15388 145 aa11.83□□□□□ -0.52
SHKBP1-209ENST00000595803 SLC36A3Q495N2 470 aa11.83□□□□□ -0.52
SHKBP1-209ENST00000595803 SLC25A53Q5H9E4 307 aa11.83□□□□□ -0.52
SHKBP1-209ENST00000595803 TMPRSS11FQ6ZWK6 438 aa11.83□□□□□ -0.52
SHKBP1-209ENST00000595803 ADGRG3Q86Y34 549 aa11.83□□□□□ -0.52
SHKBP1-209ENST00000595803 P3H2Q8IVL5 708 aa11.83□□□□□ -0.52
SHKBP1-209ENST00000595803 PARP8Q8N3A8 854 aa11.83□□□□□ -0.52
SHKBP1-209ENST00000595803 C10orf53Q8N6V4 93 aa11.83□□□□□ -0.52
SHKBP1-209ENST00000595803 ZBTB8AQ96BR9 441 aa11.83□□□□□ -0.52
SHKBP1-209ENST00000595803 BPIFA2Q96DR5 249 aa11.83□□□□□ -0.52
SHKBP1-209ENST00000595803 MRGPRX4Q96LA9 322 aa11.83□□□□□ -0.52
SHKBP1-209ENST00000595803 ZNF426Q9BUY5 554 aa11.83□□□□□ -0.52
SHKBP1-209ENST00000595803 KLHL1Q9NR64 748 aa11.83□□□□□ -0.52
SHKBP1-209ENST00000595803 TUBA8Q9NY65 449 aaPredicted RBP11.83□□□□□ -0.52
SHKBP1-209ENST00000595803 DKKL1Q9UK85 242 aa11.83□□□□□ -0.52
SHKBP1-209ENST00000595803 KLF13Q9Y2Y9 288 aaPredicted RBP11.83□□□□□ -0.52
SHKBP1-209ENST00000595803 EML6Q6ZMW3 1958 aa11.82□□□□□ -0.52
SHKBP1-209ENST00000595803 TMEM72A0PK05 275 aa11.82□□□□□ -0.52
SHKBP1-209ENST00000595803 A8MVM7 634 aa11.82□□□□□ -0.52
SHKBP1-209ENST00000595803 H3BN98 237 aa11.82□□□□□ -0.52
SHKBP1-209ENST00000595803 SLC16A6O15403 523 aa11.82□□□□□ -0.52
SHKBP1-209ENST00000595803 SUSD5O60279 629 aa11.82□□□□□ -0.52
SHKBP1-209ENST00000595803 CEACAM4O75871 244 aa11.82□□□□□ -0.52
SHKBP1-209ENST00000595803 SAGP10523 405 aaPredicted RBP11.82□□□□□ -0.52
SHKBP1-209ENST00000595803 FUT1P19526 365 aa11.82□□□□□ -0.52
SHKBP1-209ENST00000595803 FPR3P25089 353 aa11.82□□□□□ -0.52
SHKBP1-209ENST00000595803 DLX5P56178 289 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms