RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 CDX1P47902 265 aaPredicted RBP4.13□□□□□ -1.75
SMAD4-216ENST00000593223 SLC26A2P50443 739 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 RAB14P61106 215 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 TNNC1P63316 161 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 MYBPC1Q00872 1141 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 GK2Q14410 553 aaPredicted RBP4.13□□□□□ -1.75
SMAD4-216ENST00000593223 FGD3Q5JSP0 725 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 AGAP6Q5VW22 663 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 TMEM225Q6GV28 225 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 ZSCAN25Q6NSZ9 544 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 PPP1R2P3Q6NXS1 205 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 ZNF613Q6PF04 617 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 CCDC137Q6PK04 289 aaKnown RBP4.13□□□□□ -1.75
SMAD4-216ENST00000593223 DOK6Q6PKX4 331 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 METTL7BQ6UX53 244 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 APOBEC3FQ8IUX4 373 aaKnown RBP4.13□□□□□ -1.75
SMAD4-216ENST00000593223 NUDCD3Q8IVD9 361 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 C17orf78Q8N4C9 275 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 LRTM2Q8N967 370 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 NUP37Q8NFH4 326 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 OR8J2Q8NGG1 315 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 OR5T2Q8NGG2 359 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 M1APQ8TC57 530 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 FANK1Q8TC84 345 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 PHOSPHO2Q8TCD6 241 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 GIPC3Q8TF64 312 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 VPS35Q96QK1 796 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 ANGPTL4Q9BY76 406 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 UBXN6Q9BZV1 441 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 WWTR1Q9GZV5 400 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 METTL8Q9H825 291 aaKnown RBP4.13□□□□□ -1.75
SMAD4-216ENST00000593223 ZNF275Q9NSD4 429 aaPredicted RBP4.13□□□□□ -1.75
SMAD4-216ENST00000593223 SENP1Q9P0U3 644 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 ASIC3Q9UHC3 531 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 MUTYHQ9UIF7 546 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 ENPP5Q9UJA9 477 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 PSMD13Q9UNM6 376 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 FOXJ3Q9UPW0 622 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 MGAMO43451 1857 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 KMT2EQ8IZD2 1858 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 EPOPA6NHQ4 379 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 E9PQ18 207 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 M0R296 226 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 ITGB1BP1O14713 200 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 RAD51BO15315 384 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 KDELR3O43731 214 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 DUX1O43812 170 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 SCGNO76038 276 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 RPP14O95059 124 aaKnown RBP4.12□□□□□ -1.75
SMAD4-216ENST00000593223 FTH1P02794 183 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 PROS1P07225 676 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 CA3P07451 260 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 SFTPBP07988 381 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 ANKRD34CP0C6C1 535 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 CCNB1P14635 433 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 HOXB8P17481 243 aaPredicted RBP4.12□□□□□ -1.75
SMAD4-216ENST00000593223 UGT1A4P22310 534 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 ACKR3P25106 362 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 PSMA2P25787 234 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 CD40LGP29965 261 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 GNA11P29992 359 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 PPP2R1AP30153 589 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 PRDX2P32119 198 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 SOX3P41225 446 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 PTGFRP43088 359 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 MNAT1P51948 309 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 NLRP11P59045 1033 aaKnown RBP4.12□□□□□ -1.75
SMAD4-216ENST00000593223 DCDC1P59894 354 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 SEC61GP60059 68 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 SULT2A1Q06520 285 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 FUT7Q11130 342 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 ART3Q13508 389 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 VGLL4Q14135 290 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 DNAL1Q4LDG9 190 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 ZNF658Q5TYW1 1059 aaPredicted RBP4.12□□□□□ -1.75
SMAD4-216ENST00000593223 SUSD4Q5VX71 490 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 WSCD1Q658N2 575 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 ASPHD2Q6ICH7 369 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 C1orf94Q6P1W5 598 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 SCYL2Q6P3W7 929 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 CDHR3Q6ZTQ4 885 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 NLRP9Q7RTR0 991 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 ERASQ7Z444 233 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 ADGRD2Q7Z7M1 963 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 AKAP14Q86UN6 197 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 MEX3DQ86XN8 651 aaKnown RBP4.12□□□□□ -1.75
SMAD4-216ENST00000593223 TGIF2LXQ8IUE1 241 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 STHQ8IWL8 128 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 TCEANCQ8N8B7 351 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 DTX3LQ8TDB6 740 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 SLC38A4Q969I6 547 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 RFT1Q96AA3 541 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 WBP1Q96G27 269 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 CCT8L2Q96SF2 557 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 NDNQ99608 321 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 NLNQ9BYT8 704 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 RAB1BQ9H0U4 201 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 OR51V1Q9H2C8 321 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 B3GAT2Q9NPZ5 323 aa4.12□□□□□ -1.75
SMAD4-216ENST00000593223 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms