RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 SMNDC1O75940 238 aaKnown RBP eCLIP10.63□□□□□ -0.71
LIG3-213ENST00000590630 CD8BP10966 210 aa10.63□□□□□ -0.71
LIG3-213ENST00000590630 ENPP1P22413 925 aa10.63□□□□□ -0.71
LIG3-213ENST00000590630 UQCRC1P31930 480 aa10.63□□□□□ -0.71
LIG3-213ENST00000590630 CPA2P48052 419 aa10.63□□□□□ -0.71
LIG3-213ENST00000590630 NUDT2P50583 147 aa10.63□□□□□ -0.71
LIG3-213ENST00000590630 RGS8P57771 180 aaPredicted RBP10.63□□□□□ -0.71
LIG3-213ENST00000590630 NCALDP61601 193 aa10.63□□□□□ -0.71
LIG3-213ENST00000590630 SIRPAP78324 504 aa10.63□□□□□ -0.71
LIG3-213ENST00000590630 SORDQ00796 357 aa10.63□□□□□ -0.71
LIG3-213ENST00000590630 GKAP1Q5VSY0 366 aaPredicted RBP10.63□□□□□ -0.71
LIG3-213ENST00000590630 C8orf82Q6P1X6 216 aaPredicted RBP10.63□□□□□ -0.71
LIG3-213ENST00000590630 VWA1Q6PCB0 445 aa10.63□□□□□ -0.71
LIG3-213ENST00000590630 COMTD1Q86VU5 262 aa10.63□□□□□ -0.71
LIG3-213ENST00000590630 RANBP3LQ86VV4 465 aaPredicted RBP10.63□□□□□ -0.71
LIG3-213ENST00000590630 KIF18BQ86Y91 864 aa10.63□□□□□ -0.71
LIG3-213ENST00000590630 DMRTC2Q8IXT2 367 aaPredicted RBP10.63□□□□□ -0.71
LIG3-213ENST00000590630 SMYD1Q8NB12 490 aa10.63□□□□□ -0.71
LIG3-213ENST00000590630 OR2T12Q8NG77 320 aa10.63□□□□□ -0.71
LIG3-213ENST00000590630 OR6K3Q8NGY3 331 aa10.63□□□□□ -0.71
LIG3-213ENST00000590630 SLC26A7Q8TE54 656 aa10.63□□□□□ -0.71
LIG3-213ENST00000590630 ABHD3Q8WU67 409 aa10.63□□□□□ -0.71
LIG3-213ENST00000590630 ROBO4Q8WZ75 1007 aa10.63□□□□□ -0.71
LIG3-213ENST00000590630 C3orf49Q96BT1 292 aa10.63□□□□□ -0.71
LIG3-213ENST00000590630 ZHX1-C8orf76Q96EF9 292 aa10.63□□□□□ -0.71
LIG3-213ENST00000590630 ARL5BQ96KC2 179 aa10.63□□□□□ -0.71
LIG3-213ENST00000590630 ZNF559Q9BR84 538 aa10.63□□□□□ -0.71
LIG3-213ENST00000590630 TACO1Q9BSH4 297 aaKnown RBP10.63□□□□□ -0.71
LIG3-213ENST00000590630 TRIM2Q9C040 744 aa10.63□□□□□ -0.71
LIG3-213ENST00000590630 OR11A1Q9GZK7 315 aa10.63□□□□□ -0.71
LIG3-213ENST00000590630 C12orf10Q9HB07 376 aa10.63□□□□□ -0.71
LIG3-213ENST00000590630 TMEM181Q9P2C4 612 aa10.63□□□□□ -0.71
LIG3-213ENST00000590630 KLHL9Q9P2J3 617 aa10.63□□□□□ -0.71
LIG3-213ENST00000590630 KLHL13Q9P2N7 655 aa10.63□□□□□ -0.71
LIG3-213ENST00000590630 RPS6KB2Q9UBS0 482 aa10.63□□□□□ -0.71
LIG3-213ENST00000590630 CCT8L1PA6NM43 557 aa10.62□□□□□ -0.71
LIG3-213ENST00000590630 A8MVM7 634 aa10.62□□□□□ -0.71
LIG3-213ENST00000590630 SMAD9O15198 467 aaKnown RBP10.62□□□□□ -0.71
LIG3-213ENST00000590630 CYTIPO60759 359 aa10.62□□□□□ -0.71
LIG3-213ENST00000590630 FMO6PO60774 539 aa10.62□□□□□ -0.71
LIG3-213ENST00000590630 PRKD3O94806 890 aa10.62□□□□□ -0.71
LIG3-213ENST00000590630 LGI1O95970 557 aa10.62□□□□□ -0.71
LIG3-213ENST00000590630 CGAP01215 116 aa10.62□□□□□ -0.71
LIG3-213ENST00000590630 IFNA14P01570 189 aa10.62□□□□□ -0.71
LIG3-213ENST00000590630 OPN1SWP03999 348 aa10.62□□□□□ -0.71
LIG3-213ENST00000590630 FESP07332 822 aa10.62□□□□□ -0.71
LIG3-213ENST00000590630 CCNA2P20248 432 aa10.62□□□□□ -0.71
LIG3-213ENST00000590630 AGTR1P30556 359 aa10.62□□□□□ -0.71
LIG3-213ENST00000590630 KCNJ5P48544 419 aa10.62□□□□□ -0.71
LIG3-213ENST00000590630 PCYT1AP49585 367 aa10.62□□□□□ -0.71
LIG3-213ENST00000590630 HOXC5Q00444 222 aa10.62□□□□□ -0.71
LIG3-213ENST00000590630 DUSP7Q16829 419 aa10.62□□□□□ -0.71
LIG3-213ENST00000590630 FAM91A1Q658Y4 838 aa10.62□□□□□ -0.71
LIG3-213ENST00000590630 C6orf89Q6UWU4 347 aa10.62□□□□□ -0.71
LIG3-213ENST00000590630 BTLAQ7Z6A9 289 aa10.62□□□□□ -0.71
LIG3-213ENST00000590630 LUZP2Q86TE4 346 aa10.62□□□□□ -0.71
LIG3-213ENST00000590630 ATG4DQ86TL0 474 aaPredicted RBP10.62□□□□□ -0.71
LIG3-213ENST00000590630 SLC15A3Q8IY34 581 aa10.62□□□□□ -0.71
LIG3-213ENST00000590630 GPR32P1Q8NGA4 272 aa10.62□□□□□ -0.71
LIG3-213ENST00000590630 OR52E4Q8NGH9 312 aa10.62□□□□□ -0.71
LIG3-213ENST00000590630 DNAJA4Q8WW22 397 aaPredicted RBP10.62□□□□□ -0.71
LIG3-213ENST00000590630 TAMM41Q96BW9 452 aa10.62□□□□□ -0.71
LIG3-213ENST00000590630 RBM24Q9BX46 236 aaKnown RBP10.62□□□□□ -0.71
LIG3-213ENST00000590630 POTEKPQ9BYX7 375 aa10.62□□□□□ -0.71
LIG3-213ENST00000590630 PLSCR4Q9NRQ2 329 aa10.62□□□□□ -0.71
LIG3-213ENST00000590630 CMTM6Q9NX76 183 aa10.62□□□□□ -0.71
LIG3-213ENST00000590630 GALNT8Q9NY28 637 aa10.62□□□□□ -0.71
LIG3-213ENST00000590630 ADAM21Q9UKJ8 722 aa10.62□□□□□ -0.71
LIG3-213ENST00000590630 CLEC4AQ9UMR7 237 aa10.62□□□□□ -0.71
LIG3-213ENST00000590630 PROCRQ9UNN8 238 aa10.62□□□□□ -0.71
LIG3-213ENST00000590630 HRNRQ86YZ3 2850 aaPredicted RBP10.61□□□□□ -0.71
LIG3-213ENST00000590630 IGHV3-15A0A0B4J1V0 119 aa10.61□□□□□ -0.71
LIG3-213ENST00000590630 A0A1B0GWA3 101 aa10.61□□□□□ -0.71
LIG3-213ENST00000590630 ELOVL7A1L3X0 281 aa10.61□□□□□ -0.71
LIG3-213ENST00000590630 ZC3H12DA2A288 527 aaKnown RBP10.61□□□□□ -0.71
LIG3-213ENST00000590630 ELOA3DA6NLF2 546 aaPredicted RBP10.61□□□□□ -0.71
LIG3-213ENST00000590630 TMEM229AB2RXF0 380 aa10.61□□□□□ -0.71
LIG3-213ENST00000590630 EIF1BO60739 113 aaKnown RBP10.61□□□□□ -0.71
LIG3-213ENST00000590630 YES1P07947 543 aa10.61□□□□□ -0.71
LIG3-213ENST00000590630 PNMTP11086 282 aa10.61□□□□□ -0.71
LIG3-213ENST00000590630 CD247P20963 164 aa10.61□□□□□ -0.71
LIG3-213ENST00000590630 HTR2AP28223 471 aa10.61□□□□□ -0.71
LIG3-213ENST00000590630 IDUAP35475 653 aa10.61□□□□□ -0.71
LIG3-213ENST00000590630 SLC7A2P52569 658 aa10.61□□□□□ -0.71
LIG3-213ENST00000590630 CRYBA2P53672 197 aa10.61□□□□□ -0.71
LIG3-213ENST00000590630 SLC35A1P78382 337 aa10.61□□□□□ -0.71
LIG3-213ENST00000590630 RASGEF1BQ0VAM2 473 aa10.61□□□□□ -0.71
LIG3-213ENST00000590630 NRF1Q16656 503 aa10.61□□□□□ -0.71
LIG3-213ENST00000590630 ELOA3BQ3SY89 546 aa10.61□□□□□ -0.71
LIG3-213ENST00000590630 TMEM201Q5SNT2 666 aa10.61□□□□□ -0.71
LIG3-213ENST00000590630 SWT1Q5T5J6 900 aaKnown RBP10.61□□□□□ -0.71
LIG3-213ENST00000590630 ABLIM2Q6H8Q1 611 aa10.61□□□□□ -0.71
LIG3-213ENST00000590630 ULK3Q6PHR2 472 aa10.61□□□□□ -0.71
LIG3-213ENST00000590630 C5orf46Q6UWT4 87 aa10.61□□□□□ -0.71
LIG3-213ENST00000590630 GDF7Q7Z4P5 450 aa10.61□□□□□ -0.71
LIG3-213ENST00000590630 MICU2Q8IYU8 434 aa10.61□□□□□ -0.71
LIG3-213ENST00000590630 ELOA3Q8NG57 546 aa10.61□□□□□ -0.71
LIG3-213ENST00000590630 PIGXQ8TBF5 258 aa10.61□□□□□ -0.71
LIG3-213ENST00000590630 STK35Q8TDR2 534 aa10.61□□□□□ -0.71
LIG3-213ENST00000590630 ARHGDIGQ99819 225 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms