RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 SLC25A43Q8WUT9 341 aaPredicted RBP9.99□□□□□ -0.81
SMAD4-211ENST00000590499 ROBO4Q8WZ75 1007 aa9.99□□□□□ -0.81
SMAD4-211ENST00000590499 MAL2Q969L2 176 aa9.99□□□□□ -0.81
SMAD4-211ENST00000590499 UTP4Q969X6 686 aaKnown RBP9.99□□□□□ -0.81
SMAD4-211ENST00000590499 FAM46AQ96IP4 442 aaKnown RBP9.99□□□□□ -0.81
SMAD4-211ENST00000590499 CPPED1Q9BRF8 314 aaPredicted RBP9.99□□□□□ -0.81
SMAD4-211ENST00000590499 TMEM120AQ9BXJ8 343 aa9.99□□□□□ -0.81
SMAD4-211ENST00000590499 RSPO3Q9BXY4 272 aaPredicted RBP9.99□□□□□ -0.81
SMAD4-211ENST00000590499 PRRG4Q9BZD6 226 aa9.99□□□□□ -0.81
SMAD4-211ENST00000590499 MED4Q9NPJ6 270 aa9.99□□□□□ -0.81
SMAD4-211ENST00000590499 TIGARQ9NQ88 270 aa9.99□□□□□ -0.81
SMAD4-211ENST00000590499 CTPS2Q9NRF8 586 aa9.99□□□□□ -0.81
SMAD4-211ENST00000590499 PLSCR4Q9NRQ2 329 aa9.99□□□□□ -0.81
SMAD4-211ENST00000590499 GLRX2Q9NS18 164 aa9.99□□□□□ -0.81
SMAD4-211ENST00000590499 FGFR1OP2Q9NVK5 253 aa9.99□□□□□ -0.81
SMAD4-211ENST00000590499 RLIMQ9NVW2 624 aa9.99□□□□□ -0.81
SMAD4-211ENST00000590499 CHRNA9Q9UGM1 479 aa9.99□□□□□ -0.81
SMAD4-211ENST00000590499 ING1Q9UK53 422 aaPredicted RBP9.99□□□□□ -0.81
SMAD4-211ENST00000590499 PROCRQ9UNN8 238 aa9.99□□□□□ -0.81
SMAD4-211ENST00000590499 ZNF443Q9Y2A4 671 aaPredicted RBP9.99□□□□□ -0.81
SMAD4-211ENST00000590499 EMC9Q9Y3B6 208 aa9.99□□□□□ -0.81
SMAD4-211ENST00000590499 TESMINQ9Y4I5 508 aa9.99□□□□□ -0.81
SMAD4-211ENST00000590499 ROS1P08922 2347 aa9.99□□□□□ -0.81
SMAD4-211ENST00000590499 VPS13CQ709C8 3753 aa9.98□□□□□ -0.81
SMAD4-211ENST00000590499 UQCRHLA0A096LP55 91 aa9.98□□□□□ -0.81
SMAD4-211ENST00000590499 CFAP73A6NFT4 308 aa9.98□□□□□ -0.81
SMAD4-211ENST00000590499 A6NNC1 897 aa9.98□□□□□ -0.81
SMAD4-211ENST00000590499 SMAD9O15198 467 aaKnown RBP9.98□□□□□ -0.81
SMAD4-211ENST00000590499 GPX2P18283 190 aa9.98□□□□□ -0.81
SMAD4-211ENST00000590499 KLK2P20151 261 aa9.98□□□□□ -0.81
SMAD4-211ENST00000590499 ENPP1P22413 925 aa9.98□□□□□ -0.81
SMAD4-211ENST00000590499 PPIBP23284 216 aaKnown RBP9.98□□□□□ -0.81
SMAD4-211ENST00000590499 SLC7A1P30825 629 aa9.98□□□□□ -0.81
SMAD4-211ENST00000590499 CPOXP36551 454 aa9.98□□□□□ -0.81
SMAD4-211ENST00000590499 CD79BP40259 229 aa9.98□□□□□ -0.81
SMAD4-211ENST00000590499 APOBEC1P41238 236 aaKnown RBP9.98□□□□□ -0.81
SMAD4-211ENST00000590499 ACAA2P42765 397 aaKnown RBP9.98□□□□□ -0.81
SMAD4-211ENST00000590499 IDH2P48735 452 aaKnown RBP9.98□□□□□ -0.81
SMAD4-211ENST00000590499 GUCY1A3Q02108 690 aa9.98□□□□□ -0.81
SMAD4-211ENST00000590499 RNPS1Q15287 305 aaKnown RBP9.98□□□□□ -0.81
SMAD4-211ENST00000590499 GCNT6Q5T4J0 391 aa9.98□□□□□ -0.81
SMAD4-211ENST00000590499 PPP4R4Q6NUP7 873 aa9.98□□□□□ -0.81
SMAD4-211ENST00000590499 TMPPEQ6ZT21 453 aa9.98□□□□□ -0.81
SMAD4-211ENST00000590499 FCRLAQ7L513 359 aa9.98□□□□□ -0.81
SMAD4-211ENST00000590499 LSRQ86X29 649 aaPredicted RBP9.98□□□□□ -0.81
SMAD4-211ENST00000590499 ADGRG3Q86Y34 549 aa9.98□□□□□ -0.81
SMAD4-211ENST00000590499 ZNF440Q8IYI8 595 aa9.98□□□□□ -0.81
SMAD4-211ENST00000590499 CLIP4Q8N3C7 705 aa9.98□□□□□ -0.81
SMAD4-211ENST00000590499 ZNF610Q8N9Z0 462 aa9.98□□□□□ -0.81
SMAD4-211ENST00000590499 ZNF563Q8TA94 476 aa9.98□□□□□ -0.81
SMAD4-211ENST00000590499 BBS10Q8TAM1 723 aa9.98□□□□□ -0.81
SMAD4-211ENST00000590499 TSPEARQ8WU66 669 aa9.98□□□□□ -0.81
SMAD4-211ENST00000590499 DACH2Q96NX9 599 aa9.98□□□□□ -0.81
SMAD4-211ENST00000590499 OR5B2Q96R09 309 aa9.98□□□□□ -0.81
SMAD4-211ENST00000590499 GP6Q9HCN6 339 aa9.98□□□□□ -0.81
SMAD4-211ENST00000590499 SERINC1Q9NRX5 453 aa9.98□□□□□ -0.81
SMAD4-211ENST00000590499 RASSF1Q9NS23 344 aa9.98□□□□□ -0.81
SMAD4-211ENST00000590499 ELOVL5Q9NYP7 299 aa9.98□□□□□ -0.81
SMAD4-211ENST00000590499 KLHL13Q9P2N7 655 aa9.98□□□□□ -0.81
SMAD4-211ENST00000590499 LEF1Q9UJU2 399 aaPredicted RBP9.98□□□□□ -0.81
SMAD4-211ENST00000590499 OSGIN1Q9UJX0 560 aa9.98□□□□□ -0.81
SMAD4-211ENST00000590499 F8P00451 2351 aa9.98□□□□□ -0.81
SMAD4-211ENST00000590499 TEP1Q99973 2627 aaKnown RBP9.98□□□□□ -0.81
SMAD4-211ENST00000590499 HIVEP1P15822 2718 aa9.98□□□□□ -0.81
SMAD4-211ENST00000590499 SH3D21A4FU49 640 aa9.97□□□□□ -0.81
SMAD4-211ENST00000590499 PGM3O95394 542 aa9.97□□□□□ -0.81
SMAD4-211ENST00000590499 PLGP00747 810 aaPredicted RBP9.97□□□□□ -0.81
SMAD4-211ENST00000590499 PABPC4LP0CB38 370 aaKnown RBP9.97□□□□□ -0.81
SMAD4-211ENST00000590499 TROVE2P10155 538 aaKnown RBP eCLIP9.97□□□□□ -0.81
SMAD4-211ENST00000590499 UGT2B10P36537 528 aa9.97□□□□□ -0.81
SMAD4-211ENST00000590499 SLC1A3P43003 542 aa9.97□□□□□ -0.81
SMAD4-211ENST00000590499 HTR3AP46098 478 aa9.97□□□□□ -0.81
SMAD4-211ENST00000590499 DIO1P49895 249 aa9.97□□□□□ -0.81
SMAD4-211ENST00000590499 CTBP2P56545 445 aa9.97□□□□□ -0.81
SMAD4-211ENST00000590499 LARS2Q15031 903 aaKnown RBP9.97□□□□□ -0.81
SMAD4-211ENST00000590499 ADRM1Q16186 407 aa9.97□□□□□ -0.81
SMAD4-211ENST00000590499 ZSWIM7Q19AV6 140 aa9.97□□□□□ -0.81
SMAD4-211ENST00000590499 RUNDC3AQ59EK9 446 aa9.97□□□□□ -0.81
SMAD4-211ENST00000590499 GTF2IRD2BQ6EKJ0 949 aa9.97□□□□□ -0.81
SMAD4-211ENST00000590499 ABLIM2Q6H8Q1 611 aa9.97□□□□□ -0.81
SMAD4-211ENST00000590499 DHDDSQ86SQ9 333 aa9.97□□□□□ -0.81
SMAD4-211ENST00000590499 GTF2IRD2Q86UP8 949 aa9.97□□□□□ -0.81
SMAD4-211ENST00000590499 TMEM200AQ86VY9 491 aa9.97□□□□□ -0.81
SMAD4-211ENST00000590499 SLC43A2Q8N370 569 aa9.97□□□□□ -0.81
SMAD4-211ENST00000590499 ARL5BQ96KC2 179 aa9.97□□□□□ -0.81
SMAD4-211ENST00000590499 PSD2Q9BQI7 771 aa9.97□□□□□ -0.81
SMAD4-211ENST00000590499 GPATCH1Q9BRR8 931 aaKnown RBP9.97□□□□□ -0.81
SMAD4-211ENST00000590499 SPATA9Q9BWV2 254 aa9.97□□□□□ -0.81
SMAD4-211ENST00000590499 TMEM38AQ9H6F2 299 aa9.97□□□□□ -0.81
SMAD4-211ENST00000590499 BCO1Q9HAY6 547 aa9.97□□□□□ -0.81
SMAD4-211ENST00000590499 PRDM4Q9UKN5 801 aa9.97□□□□□ -0.81
SMAD4-211ENST00000590499 CORO2BQ9UQ03 480 aa9.97□□□□□ -0.81
SMAD4-211ENST00000590499 NDUFAF1Q9Y375 327 aa9.97□□□□□ -0.81
SMAD4-211ENST00000590499 SPIN1Q9Y657 262 aaPredicted RBP9.97□□□□□ -0.81
SMAD4-211ENST00000590499 ZNF469Q96JG9 3925 aaPredicted RBP9.97□□□□□ -0.81
SMAD4-211ENST00000590499 TMED7-TICAM2A0A0A6YYA0 188 aa9.96□□□□□ -0.82
SMAD4-211ENST00000590499 IGHV3-15A0A0B4J1V0 119 aa9.96□□□□□ -0.82
SMAD4-211ENST00000590499 TMEM72A0PK05 275 aa9.96□□□□□ -0.82
SMAD4-211ENST00000590499 TMEM247A6NEH6 219 aa9.96□□□□□ -0.82
SMAD4-211ENST00000590499 FBP2O00757 339 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms