RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 PRG2P13727 222 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 ELAVL1Q15717 326 aaKnown RBP14.04□□□□□ -0.16
CIRBP-228ENST00000590347 PDZD11Q5EBL8 140 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 EXOSC6Q5RKV6 272 aaKnown RBP14.04□□□□□ -0.16
CIRBP-228ENST00000590347 DHRS7BQ6IAN0 325 aaPredicted RBP14.04□□□□□ -0.16
CIRBP-228ENST00000590347 FAM122BQ7Z309 247 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 NRMQ8IXM6 262 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 OR6V1Q8N148 313 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 FAM71CQ8NEG0 241 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 ASB11Q8WXH4 323 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 LAT2Q9GZY6 243 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 TRIM36Q9NQ86 728 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 CAMK2AQ9UQM7 478 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 KANTRA0A1W2PQU2 76 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 KDM4EB2RXH2 506 aaPredicted RBP14.04□□□□□ -0.16
CIRBP-228ENST00000590347 ZNF197O14709 1029 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 RAD1O60671 282 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 YIF1AO95070 293 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 EPPINO95925 133 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 SDHAP31040 664 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 CLDN2P57739 230 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 ACTR1AP61163 376 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 GGTA1PQ4G0N0 100 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 OR10H5Q8NGA6 315 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 OR6K3Q8NGY3 331 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 TRMT2BQ96GJ1 504 aaKnown RBP14.04□□□□□ -0.16
CIRBP-228ENST00000590347 TRIM62Q9BVG3 475 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 SLC12A9Q9BXP2 914 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 RSPH9Q9H1X1 276 aaPredicted RBP14.04□□□□□ -0.16
CIRBP-228ENST00000590347 BRD9Q9H8M2 597 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 CREBZFQ9NS37 354 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 ENTPD4Q9Y227 616 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 C5orf52A6NGY3 159 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 M0QZQ0 153 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 CACNB4O00305 520 aaPredicted RBP14.04□□□□□ -0.16
CIRBP-228ENST00000590347 HMGN4O00479 90 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 SURF4O15260 269 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 PRAF2O60831 178 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 ZNF3P17036 446 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 RAG2P55895 527 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 DYRK1AQ13627 763 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 TCTN1Q2MV58 587 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 FNDC3BQ53EP0 1204 aaKnown RBP14.04□□□□□ -0.16
CIRBP-228ENST00000590347 TMEM69Q5SWH9 247 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 AGTRAPQ6RW13 159 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 MOB3CQ70IA8 216 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 PPP1R3BQ86XI6 285 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 SEMA6DQ8NFY4 1073 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 FCAMRQ8WWV6 532 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 WBP2Q969T9 261 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 SUCNR1Q9BXA5 334 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 KCNK15Q9H427 330 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 ZMIZ1Q9ULJ6 1067 aa14.04□□□□□ -0.16
CIRBP-228ENST00000590347 SC5DO75845 299 aa14.03□□□□□ -0.16
CIRBP-228ENST00000590347 CD160O95971 181 aa14.03□□□□□ -0.16
CIRBP-228ENST00000590347 RB1P06400 928 aa14.03□□□□□ -0.16
CIRBP-228ENST00000590347 CPT2P23786 658 aa14.03□□□□□ -0.16
CIRBP-228ENST00000590347 ABCD3P28288 659 aa14.03□□□□□ -0.16
CIRBP-228ENST00000590347 F2RL1P55085 397 aa14.03□□□□□ -0.16
CIRBP-228ENST00000590347 ECH1Q13011 328 aa14.03□□□□□ -0.16
CIRBP-228ENST00000590347 CBFBQ13951 182 aa14.03□□□□□ -0.16
CIRBP-228ENST00000590347 SLBPQ14493 270 aaKnown RBP eCLIP14.03□□□□□ -0.16
CIRBP-228ENST00000590347 PCGF3Q3KNV8 242 aa14.03□□□□□ -0.16
CIRBP-228ENST00000590347 ADAM5Q6NVV9 412 aa14.03□□□□□ -0.16
CIRBP-228ENST00000590347 PIGQQ9BRB3 760 aa14.03□□□□□ -0.16
CIRBP-228ENST00000590347 BHLHE41Q9C0J9 482 aaPredicted RBP14.03□□□□□ -0.16
CIRBP-228ENST00000590347 SEMA4GQ9NTN9 838 aa14.03□□□□□ -0.16
CIRBP-228ENST00000590347 KLHL9Q9P2J3 617 aa14.03□□□□□ -0.16
CIRBP-228ENST00000590347 URADA6NGE7 173 aa14.03□□□□□ -0.16
CIRBP-228ENST00000590347 OR2AT4A6NND4 320 aa14.03□□□□□ -0.16
CIRBP-228ENST00000590347 IDSB3KWA1 339 aa14.03□□□□□ -0.16
CIRBP-228ENST00000590347 CDC42EP2O14613 210 aa14.03□□□□□ -0.16
CIRBP-228ENST00000590347 GJB5O95377 273 aa14.03□□□□□ -0.16
CIRBP-228ENST00000590347 STAT5AP42229 794 aa14.03□□□□□ -0.16
CIRBP-228ENST00000590347 STX4Q12846 297 aa14.03□□□□□ -0.16
CIRBP-228ENST00000590347 GPNMBQ14956 572 aa14.03□□□□□ -0.16
CIRBP-228ENST00000590347 ZNF311Q5JNZ3 666 aa14.03□□□□□ -0.16
CIRBP-228ENST00000590347 ETFBKMTQ8IXQ9 262 aa14.03□□□□□ -0.16
CIRBP-228ENST00000590347 BEST3Q8N1M1 668 aa14.03□□□□□ -0.16
CIRBP-228ENST00000590347 OR51S1Q8NGJ8 323 aa14.03□□□□□ -0.16
CIRBP-228ENST00000590347 AKR7LQ8NHP1 331 aa14.03□□□□□ -0.16
CIRBP-228ENST00000590347 PHOSPHO2Q8TCD6 241 aa14.03□□□□□ -0.16
CIRBP-228ENST00000590347 TMED6Q8WW62 240 aa14.03□□□□□ -0.16
CIRBP-228ENST00000590347 RFKQ969G6 155 aa14.03□□□□□ -0.16
CIRBP-228ENST00000590347 LCORQ96JN0 433 aaPredicted RBP14.03□□□□□ -0.16
CIRBP-228ENST00000590347 TMPRSS13Q9BYE2 586 aa14.03□□□□□ -0.16
CIRBP-228ENST00000590347 FAM117AQ9C073 453 aa14.03□□□□□ -0.16
CIRBP-228ENST00000590347 SLC38A1Q9H2H9 487 aa14.03□□□□□ -0.16
CIRBP-228ENST00000590347 A0A1B0GW55 424 aa14.02□□□□□ -0.16
CIRBP-228ENST00000590347 OR14I1A6ND48 311 aa14.02□□□□□ -0.16
CIRBP-228ENST00000590347 COLCA2A8K830 154 aa14.02□□□□□ -0.16
CIRBP-228ENST00000590347 HMSDA8MTL9 139 aa14.02□□□□□ -0.16
CIRBP-228ENST00000590347 STMND1H3BQB6 276 aa14.02□□□□□ -0.16
CIRBP-228ENST00000590347 H7C0S8 307 aa14.02□□□□□ -0.16
CIRBP-228ENST00000590347 VEGFDO43915 354 aa14.02□□□□□ -0.16
CIRBP-228ENST00000590347 DUX4L2P0CJ85 424 aa14.02□□□□□ -0.16
CIRBP-228ENST00000590347 DUX4L3P0CJ86 424 aa14.02□□□□□ -0.16
CIRBP-228ENST00000590347 DUX4L4P0CJ87 422 aa14.02□□□□□ -0.16
CIRBP-228ENST00000590347 DUX4L5P0CJ88 424 aa14.02□□□□□ -0.16
CIRBP-228ENST00000590347 DUX4L6P0CJ89 424 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms