RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 HS6ST2Q96MM7 605 aa12.26□□□□□ -0.45
VMP1-210ENST00000589823 EPYCQ99645 322 aa12.26□□□□□ -0.45
VMP1-210ENST00000589823 TMEM43Q9BTV4 400 aa12.26□□□□□ -0.45
VMP1-210ENST00000589823 POTEKPQ9BYX7 375 aa12.26□□□□□ -0.45
VMP1-210ENST00000589823 OR11A1Q9GZK7 315 aa12.26□□□□□ -0.45
VMP1-210ENST00000589823 ANKRD19PQ9H560 264 aa12.26□□□□□ -0.45
VMP1-210ENST00000589823 NMNAT1Q9HAN9 279 aaPredicted RBP12.26□□□□□ -0.45
VMP1-210ENST00000589823 TIGARQ9NQ88 270 aa12.26□□□□□ -0.45
VMP1-210ENST00000589823 PAQR5Q9NXK6 330 aaPredicted RBP12.26□□□□□ -0.45
VMP1-210ENST00000589823 ALKBH4Q9NXW9 302 aa12.26□□□□□ -0.45
VMP1-210ENST00000589823 AP4S1Q9Y587 144 aa12.26□□□□□ -0.45
VMP1-210ENST00000589823 FREM3P0C091 2139 aa12.25□□□□□ -0.45
VMP1-210ENST00000589823 A0A0J9YW62 118 aa12.25□□□□□ -0.45
VMP1-210ENST00000589823 A0A1W2PNR3 127 aa12.25□□□□□ -0.45
VMP1-210ENST00000589823 A0A1W2PRQ8 180 aa12.25□□□□□ -0.45
VMP1-210ENST00000589823 FIGNL2A6NMB9 653 aa12.25□□□□□ -0.45
VMP1-210ENST00000589823 AHRRA9YTQ3 701 aa12.25□□□□□ -0.45
VMP1-210ENST00000589823 H0YC42 278 aa12.25□□□□□ -0.45
VMP1-210ENST00000589823 GNGT2O14610 69 aa12.25□□□□□ -0.45
VMP1-210ENST00000589823 TNFSF11O14788 317 aa12.25□□□□□ -0.45
VMP1-210ENST00000589823 AHSA1O95433 338 aa12.25□□□□□ -0.45
VMP1-210ENST00000589823 GABRA1P14867 456 aa12.25□□□□□ -0.45
VMP1-210ENST00000589823 IDUAP35475 653 aa12.25□□□□□ -0.45
VMP1-210ENST00000589823 EIF1AXP47813 144 aaKnown RBP12.25□□□□□ -0.45
VMP1-210ENST00000589823 SUCLG1P53597 346 aaKnown RBP12.25□□□□□ -0.45
VMP1-210ENST00000589823 TPD52P55327 224 aaPredicted RBP12.25□□□□□ -0.45
VMP1-210ENST00000589823 CLDN15P56746 228 aa12.25□□□□□ -0.45
VMP1-210ENST00000589823 CARD18P57730 90 aa12.25□□□□□ -0.45
VMP1-210ENST00000589823 CSNK2A1P68400 391 aaPredicted RBP12.25□□□□□ -0.45
VMP1-210ENST00000589823 DGCR6Q14129 220 aa12.25□□□□□ -0.45
VMP1-210ENST00000589823 SGCBQ16585 318 aa12.25□□□□□ -0.45
VMP1-210ENST00000589823 C1orf140Q5VVS0 124 aa12.25□□□□□ -0.45
VMP1-210ENST00000589823 ZFP1Q6P2D0 407 aa12.25□□□□□ -0.45
VMP1-210ENST00000589823 LINC00114Q6XXX2 140 aa12.25□□□□□ -0.45
VMP1-210ENST00000589823 WDR88Q6ZMY6 472 aa12.25□□□□□ -0.45
VMP1-210ENST00000589823 Q6ZPB1 254 aaPredicted RBP12.25□□□□□ -0.45
VMP1-210ENST00000589823 RRM2BQ7LG56 351 aa12.25□□□□□ -0.45
VMP1-210ENST00000589823 ZNF605Q86T29 641 aa12.25□□□□□ -0.45
VMP1-210ENST00000589823 TMEM239Q8WW34 195 aa12.25□□□□□ -0.45
VMP1-210ENST00000589823 STMN2Q93045 179 aa12.25□□□□□ -0.45
VMP1-210ENST00000589823 SLCO4A1Q96BD0 722 aa12.25□□□□□ -0.45
VMP1-210ENST00000589823 DHRS1Q96LJ7 313 aa12.25□□□□□ -0.45
VMP1-210ENST00000589823 PRSS27Q9BQR3 290 aa12.25□□□□□ -0.45
VMP1-210ENST00000589823 TAPBPLQ9BX59 468 aa12.25□□□□□ -0.45
VMP1-210ENST00000589823 SLC19A3Q9BZV2 496 aa12.25□□□□□ -0.45
VMP1-210ENST00000589823 KLHL4Q9C0H6 718 aa12.25□□□□□ -0.45
VMP1-210ENST00000589823 PNPLA3Q9NST1 481 aa12.25□□□□□ -0.45
VMP1-210ENST00000589823 ARMC1Q9NVT9 282 aa12.25□□□□□ -0.45
VMP1-210ENST00000589823 ZNF835Q9Y2P0 537 aa12.25□□□□□ -0.45
VMP1-210ENST00000589823 ZNF407Q9C0G0 2248 aa12.25□□□□□ -0.45
VMP1-210ENST00000589823 FAM208BQ5VWN6 2430 aa12.25□□□□□ -0.45
VMP1-210ENST00000589823 IGKV1D-42A0A075B6H8 117 aa12.24□□□□□ -0.45
VMP1-210ENST00000589823 TRAV36DV7A0A075B6V5 113 aa12.24□□□□□ -0.45
VMP1-210ENST00000589823 ZC3H12DA2A288 527 aaKnown RBP12.24□□□□□ -0.45
VMP1-210ENST00000589823 SULT2B1O00204 365 aa12.24□□□□□ -0.45
VMP1-210ENST00000589823 TNFRSF11BO00300 401 aa12.24□□□□□ -0.45
VMP1-210ENST00000589823 HNRNPRO43390 633 aaKnown RBP12.24□□□□□ -0.45
VMP1-210ENST00000589823 OR2T1O43869 369 aa12.24□□□□□ -0.45
VMP1-210ENST00000589823 CXCL13O43927 109 aa12.24□□□□□ -0.45
VMP1-210ENST00000589823 KALRNO60229 2985 aa12.24□□□□□ -0.45
VMP1-210ENST00000589823 WDR1O75083 606 aa12.24□□□□□ -0.45
VMP1-210ENST00000589823 NPIPB7O75200 414 aa12.24□□□□□ -0.45
VMP1-210ENST00000589823 KRT36O76013 467 aa12.24□□□□□ -0.45
VMP1-210ENST00000589823 PMS2P2O95744 297 aa12.24□□□□□ -0.45
VMP1-210ENST00000589823 HOXD4P09016 255 aaPredicted RBP12.24□□□□□ -0.45
VMP1-210ENST00000589823 PTNP21246 168 aa12.24□□□□□ -0.45
VMP1-210ENST00000589823 PTGER4P35408 488 aa12.24□□□□□ -0.45
VMP1-210ENST00000589823 OR2B6P58173 313 aa12.24□□□□□ -0.45
VMP1-210ENST00000589823 MYBPHQ13203 477 aa12.24□□□□□ -0.45
VMP1-210ENST00000589823 CTU2Q2VPK5 515 aaKnown RBP12.24□□□□□ -0.45
VMP1-210ENST00000589823 OR2T5Q6IEZ7 315 aa12.24□□□□□ -0.45
VMP1-210ENST00000589823 ZNF730Q6ZMV8 503 aa12.24□□□□□ -0.45
VMP1-210ENST00000589823 TMPPEQ6ZT21 453 aa12.24□□□□□ -0.45
VMP1-210ENST00000589823 P3H2Q8IVL5 708 aa12.24□□□□□ -0.45
VMP1-210ENST00000589823 OR2T29Q8NH02 315 aa12.24□□□□□ -0.45
VMP1-210ENST00000589823 OR52J3Q8NH60 311 aa12.24□□□□□ -0.45
VMP1-210ENST00000589823 OR10D3Q8NH80 312 aa12.24□□□□□ -0.45
VMP1-210ENST00000589823 ZPLD1Q8TCW7 415 aa12.24□□□□□ -0.45
VMP1-210ENST00000589823 TMEM255BQ8WV15 326 aa12.24□□□□□ -0.45
VMP1-210ENST00000589823 PYDC1Q8WXC3 89 aa12.24□□□□□ -0.45
VMP1-210ENST00000589823 ACOT11Q8WXI4 607 aaPredicted RBP12.24□□□□□ -0.45
VMP1-210ENST00000589823 OSTF1Q92882 214 aa12.24□□□□□ -0.45
VMP1-210ENST00000589823 ZHX1-C8orf76Q96EF9 292 aa12.24□□□□□ -0.45
VMP1-210ENST00000589823 KTI12Q96EK9 354 aaPredicted RBP12.24□□□□□ -0.45
VMP1-210ENST00000589823 DNAJA3Q96EY1 480 aa12.24□□□□□ -0.45
VMP1-210ENST00000589823 ADGRG7Q96K78 797 aa12.24□□□□□ -0.45
VMP1-210ENST00000589823 ARL5BQ96KC2 179 aa12.24□□□□□ -0.45
VMP1-210ENST00000589823 TUBA1CQ9BQE3 449 aa12.24□□□□□ -0.45
VMP1-210ENST00000589823 TP63Q9H3D4 680 aaPredicted RBP12.24□□□□□ -0.45
VMP1-210ENST00000589823 REEP1Q9H902 201 aa12.24□□□□□ -0.45
VMP1-210ENST00000589823 MAN2C1Q9NTJ4 1040 aa12.24□□□□□ -0.45
VMP1-210ENST00000589823 TMCC3Q9ULS5 477 aa12.24□□□□□ -0.45
VMP1-210ENST00000589823 MED31Q9Y3C7 131 aa12.24□□□□□ -0.45
VMP1-210ENST00000589823 PRRC2CQ9Y520 2896 aaKnown RBP12.23□□□□□ -0.45
VMP1-210ENST00000589823 TRGV8A0A0C4DH27 118 aa12.23□□□□□ -0.45
VMP1-210ENST00000589823 KPNA4O00629 521 aaPredicted RBP12.23□□□□□ -0.45
VMP1-210ENST00000589823 ENTPD5O75356 428 aa12.23□□□□□ -0.45
VMP1-210ENST00000589823 DEAF1O75398 565 aaPredicted RBP12.23□□□□□ -0.45
VMP1-210ENST00000589823 TIPRLO75663 272 aa12.23□□□□□ -0.45
VMP1-210ENST00000589823 SYNGR4O95473 234 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms