RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 SLC25A53Q5H9E4 307 aa9.3□□□□□ -0.92
SDF2-208ENST00000589788 GCNT6Q5T4J0 391 aa9.3□□□□□ -0.92
SDF2-208ENST00000589788 REP15Q6BDI9 236 aa9.3□□□□□ -0.92
SDF2-208ENST00000589788 CDPF1Q6NVV7 123 aa9.3□□□□□ -0.92
SDF2-208ENST00000589788 POMZP3Q6PJE2 187 aa9.3□□□□□ -0.92
SDF2-208ENST00000589788 MSRB3Q8IXL7 192 aa9.3□□□□□ -0.92
SDF2-208ENST00000589788 ZNF440Q8IYI8 595 aa9.3□□□□□ -0.92
SDF2-208ENST00000589788 OR52P1PQ8NH57 321 aa9.3□□□□□ -0.92
SDF2-208ENST00000589788 WFDC12Q8WWY7 111 aa9.3□□□□□ -0.92
SDF2-208ENST00000589788 CNOT9Q92600 299 aaKnown RBP9.3□□□□□ -0.92
SDF2-208ENST00000589788 OSTF1Q92882 214 aa9.3□□□□□ -0.92
SDF2-208ENST00000589788 RNASE6Q93091 150 aaKnown RBP9.3□□□□□ -0.92
SDF2-208ENST00000589788 RCN3Q96D15 328 aa9.3□□□□□ -0.92
SDF2-208ENST00000589788 TMEM19Q96HH6 336 aa9.3□□□□□ -0.92
SDF2-208ENST00000589788 REXO5Q96IC2 774 aaKnown RBP9.3□□□□□ -0.92
SDF2-208ENST00000589788 PIGMQ9H3S5 423 aa9.3□□□□□ -0.92
SDF2-208ENST00000589788 ARMC7Q9H6L4 198 aa9.3□□□□□ -0.92
SDF2-208ENST00000589788 EFCAB1Q9HAE3 211 aa9.3□□□□□ -0.92
SDF2-208ENST00000589788 A4GALTQ9NPC4 353 aa9.3□□□□□ -0.92
SDF2-208ENST00000589788 ACER3Q9NUN7 267 aa9.3□□□□□ -0.92
SDF2-208ENST00000589788 VAPAQ9P0L0 249 aa9.3□□□□□ -0.92
SDF2-208ENST00000589788 SLAMF8Q9P0V8 285 aa9.3□□□□□ -0.92
SDF2-208ENST00000589788 DSPPQ9NZW4 1301 aa9.29□□□□□ -0.92
SDF2-208ENST00000589788 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.29□□□□□ -0.92
SDF2-208ENST00000589788 A0A0J9YW62 118 aa9.29□□□□□ -0.92
SDF2-208ENST00000589788 MRASO14807 208 aa9.29□□□□□ -0.92
SDF2-208ENST00000589788 EFNA2O43921 213 aa9.29□□□□□ -0.92
SDF2-208ENST00000589788 BCAS1O75363 584 aaPredicted RBP9.29□□□□□ -0.92
SDF2-208ENST00000589788 NTN1O95631 604 aa9.29□□□□□ -0.92
SDF2-208ENST00000589788 IGFBP2P18065 325 aa9.29□□□□□ -0.92
SDF2-208ENST00000589788 SHC1P29353 583 aa9.29□□□□□ -0.92
SDF2-208ENST00000589788 SSTR2P30874 369 aa9.29□□□□□ -0.92
SDF2-208ENST00000589788 PEX19P40855 299 aa9.29□□□□□ -0.92
SDF2-208ENST00000589788 IDH2P48735 452 aaKnown RBP9.29□□□□□ -0.92
SDF2-208ENST00000589788 NUDT2P50583 147 aa9.29□□□□□ -0.92
SDF2-208ENST00000589788 CTBP2P56545 445 aa9.29□□□□□ -0.92
SDF2-208ENST00000589788 SIRPAP78324 504 aa9.29□□□□□ -0.92
SDF2-208ENST00000589788 NFYCQ13952 458 aa9.29□□□□□ -0.92
SDF2-208ENST00000589788 MAPK11Q15759 364 aa9.29□□□□□ -0.92
SDF2-208ENST00000589788 CTU2Q2VPK5 515 aaKnown RBP9.29□□□□□ -0.92
SDF2-208ENST00000589788 FBXL19-AS1Q494R0 122 aa9.29□□□□□ -0.92
SDF2-208ENST00000589788 MRPL2Q5T653 305 aaKnown RBP9.29□□□□□ -0.92
SDF2-208ENST00000589788 PRAMEF8Q5VWM4 474 aa9.29□□□□□ -0.92
SDF2-208ENST00000589788 PRAMEF7Q5VXH5 474 aa9.29□□□□□ -0.92
SDF2-208ENST00000589788 GTF2IRD2BQ6EKJ0 949 aa9.29□□□□□ -0.92
SDF2-208ENST00000589788 C3orf33Q6P1S2 294 aa9.29□□□□□ -0.92
SDF2-208ENST00000589788 HACD2Q6Y1H2 254 aa9.29□□□□□ -0.92
SDF2-208ENST00000589788 PLEKHM3Q6ZWE6 761 aa9.29□□□□□ -0.92
SDF2-208ENST00000589788 DHDDSQ86SQ9 333 aa9.29□□□□□ -0.92
SDF2-208ENST00000589788 LUZP2Q86TE4 346 aa9.29□□□□□ -0.92
SDF2-208ENST00000589788 GTF2IRD2Q86UP8 949 aa9.29□□□□□ -0.92
SDF2-208ENST00000589788 KIF18BQ86Y91 864 aa9.29□□□□□ -0.92
SDF2-208ENST00000589788 DPP10Q8N608 796 aa9.29□□□□□ -0.92
SDF2-208ENST00000589788 PCYOX1LQ8NBM8 494 aa9.29□□□□□ -0.92
SDF2-208ENST00000589788 ACBD4Q8NC06 268 aa9.29□□□□□ -0.92
SDF2-208ENST00000589788 BBS10Q8TAM1 723 aa9.29□□□□□ -0.92
SDF2-208ENST00000589788 SLC25A43Q8WUT9 341 aaPredicted RBP9.29□□□□□ -0.92
SDF2-208ENST00000589788 MAL2Q969L2 176 aa9.29□□□□□ -0.92
SDF2-208ENST00000589788 CPNE4Q96A23 557 aaPredicted RBP9.29□□□□□ -0.92
SDF2-208ENST00000589788 ADGRG7Q96K78 797 aa9.29□□□□□ -0.92
SDF2-208ENST00000589788 MEGF10Q96KG7 1140 aa9.29□□□□□ -0.92
SDF2-208ENST00000589788 TRIM8Q9BZR9 551 aa9.29□□□□□ -0.92
SDF2-208ENST00000589788 C1orf21Q9H246 121 aa9.29□□□□□ -0.92
SDF2-208ENST00000589788 RNF122Q9H9V4 155 aa9.29□□□□□ -0.92
SDF2-208ENST00000589788 PACSIN3Q9UKS6 424 aa9.29□□□□□ -0.92
SDF2-208ENST00000589788 ZNF443Q9Y2A4 671 aaPredicted RBP9.29□□□□□ -0.92
SDF2-208ENST00000589788 TMA7Q9Y2S6 64 aaKnown RBP9.29□□□□□ -0.92
SDF2-208ENST00000589788 IFT52Q9Y366 437 aa9.29□□□□□ -0.92
SDF2-208ENST00000589788 SPIN1Q9Y657 262 aaPredicted RBP9.29□□□□□ -0.92
SDF2-208ENST00000589788 NAV2Q8IVL1 2488 aa9.28□□□□□ -0.92
SDF2-208ENST00000589788 TRBV5-3A0A0A0MS03 114 aa9.28□□□□□ -0.92
SDF2-208ENST00000589788 CDHR4A6H8M9 788 aa9.28□□□□□ -0.92
SDF2-208ENST00000589788 CFAP73A6NFT4 308 aa9.28□□□□□ -0.92
SDF2-208ENST00000589788 ERICH4A6NGS2 130 aa9.28□□□□□ -0.92
SDF2-208ENST00000589788 ETV2O00321 342 aaPredicted RBP9.28□□□□□ -0.92
SDF2-208ENST00000589788 AP3D1O14617 1153 aa9.28□□□□□ -0.92
SDF2-208ENST00000589788 AIM2O14862 343 aa9.28□□□□□ -0.92
SDF2-208ENST00000589788 RGS13O14921 159 aa9.28□□□□□ -0.92
SDF2-208ENST00000589788 TNFSF13O75888 250 aa9.28□□□□□ -0.92
SDF2-208ENST00000589788 AQP8O94778 261 aa9.28□□□□□ -0.92
SDF2-208ENST00000589788 NPPAP01160 153 aa9.28□□□□□ -0.92
SDF2-208ENST00000589788 PABPC4LP0CB38 370 aaKnown RBP9.28□□□□□ -0.92
SDF2-208ENST00000589788 TFPIP10646 304 aa9.28□□□□□ -0.92
SDF2-208ENST00000589788 PRF1P14222 555 aa9.28□□□□□ -0.92
SDF2-208ENST00000589788 GPX2P18283 190 aa9.28□□□□□ -0.92
SDF2-208ENST00000589788 RAB6AP20340 208 aa9.28□□□□□ -0.92
SDF2-208ENST00000589788 APOBEC1P41238 236 aaKnown RBP9.28□□□□□ -0.92
SDF2-208ENST00000589788 HTR3AP46098 478 aa9.28□□□□□ -0.92
SDF2-208ENST00000589788 RASSF2P50749 326 aa9.28□□□□□ -0.92
SDF2-208ENST00000589788 DLX5P56178 289 aa9.28□□□□□ -0.92
SDF2-208ENST00000589788 CDK6Q00534 326 aa9.28□□□□□ -0.92
SDF2-208ENST00000589788 ZSWIM7Q19AV6 140 aa9.28□□□□□ -0.92
SDF2-208ENST00000589788 TRMT5Q32P41 509 aaKnown RBP9.28□□□□□ -0.92
SDF2-208ENST00000589788 REEP3Q6NUK4 255 aa9.28□□□□□ -0.92
SDF2-208ENST00000589788 DLEU7Q6UYE1 221 aa9.28□□□□□ -0.92
SDF2-208ENST00000589788 ZNF836Q6ZNA1 936 aa9.28□□□□□ -0.92
SDF2-208ENST00000589788 GRINAQ7Z429 371 aa9.28□□□□□ -0.92
SDF2-208ENST00000589788 VRK2Q86Y07 508 aa9.28□□□□□ -0.92
SDF2-208ENST00000589788 KRT73Q86Y46 540 aa9.28□□□□□ -0.92
SDF2-208ENST00000589788 NFKBIDQ8NI38 313 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms