RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 NPIPA3F8WFD2 350 aa13.66□□□□□ -0.22
ATG4D-211ENST00000589753 KPNA4O00629 521 aaPredicted RBP13.66□□□□□ -0.22
ATG4D-211ENST00000589753 EIF1AYO14602 144 aaKnown RBP13.66□□□□□ -0.22
ATG4D-211ENST00000589753 NPIPB7O75200 414 aa13.66□□□□□ -0.22
ATG4D-211ENST00000589753 CPN1P15169 458 aa13.66□□□□□ -0.22
ATG4D-211ENST00000589753 PTGS2P35354 604 aa13.66□□□□□ -0.22
ATG4D-211ENST00000589753 LIMS1P48059 325 aa13.66□□□□□ -0.22
ATG4D-211ENST00000589753 SUCLG1P53597 346 aaKnown RBP13.66□□□□□ -0.22
ATG4D-211ENST00000589753 UGT2B15P54855 530 aa13.66□□□□□ -0.22
ATG4D-211ENST00000589753 CLDN20P56880 219 aa13.66□□□□□ -0.22
ATG4D-211ENST00000589753 PPP1R8Q12972 351 aaKnown RBP13.66□□□□□ -0.22
ATG4D-211ENST00000589753 GK3PQ14409 553 aa13.66□□□□□ -0.22
ATG4D-211ENST00000589753 EXOC3L2Q2M3D2 409 aa13.66□□□□□ -0.22
ATG4D-211ENST00000589753 C1orf140Q5VVS0 124 aa13.66□□□□□ -0.22
ATG4D-211ENST00000589753 TBPL2Q6SJ96 375 aa13.66□□□□□ -0.22
ATG4D-211ENST00000589753 GFRALQ6UXV0 394 aa13.66□□□□□ -0.22
ATG4D-211ENST00000589753 ESPNLQ6ZVH7 1005 aa13.66□□□□□ -0.22
ATG4D-211ENST00000589753 MBOAT2Q6ZWT7 520 aa13.66□□□□□ -0.22
ATG4D-211ENST00000589753 RRM2BQ7LG56 351 aa13.66□□□□□ -0.22
ATG4D-211ENST00000589753 GGNQ86UU5 652 aa13.66□□□□□ -0.22
ATG4D-211ENST00000589753 P3H2Q8IVL5 708 aa13.66□□□□□ -0.22
ATG4D-211ENST00000589753 RNF113BQ8IZP6 322 aaKnown RBP13.66□□□□□ -0.22
ATG4D-211ENST00000589753 OR4C15Q8NGM1 316 aa13.66□□□□□ -0.22
ATG4D-211ENST00000589753 WDYHV1Q96HA8 205 aa13.66□□□□□ -0.22
ATG4D-211ENST00000589753 ARL5BQ96KC2 179 aa13.66□□□□□ -0.22
ATG4D-211ENST00000589753 OR5B2Q96R09 309 aa13.66□□□□□ -0.22
ATG4D-211ENST00000589753 FUZQ9BT04 418 aa13.66□□□□□ -0.22
ATG4D-211ENST00000589753 BDH2Q9BUT1 245 aa13.66□□□□□ -0.22
ATG4D-211ENST00000589753 MED31Q9Y3C7 131 aa13.66□□□□□ -0.22
ATG4D-211ENST00000589753 HDGFL3Q9Y3E1 203 aa13.66□□□□□ -0.22
ATG4D-211ENST00000589753 FREM3P0C091 2139 aa13.66□□□□□ -0.22
ATG4D-211ENST00000589753 NBEAQ8NFP9 2946 aa13.65□□□□□ -0.22
ATG4D-211ENST00000589753 EPG5Q9HCE0 2579 aa13.65□□□□□ -0.22
ATG4D-211ENST00000589753 TRAV36DV7A0A075B6V5 113 aa13.65□□□□□ -0.22
ATG4D-211ENST00000589753 A0A0J9YW62 118 aa13.65□□□□□ -0.22
ATG4D-211ENST00000589753 A0A1W2PNR3 127 aa13.65□□□□□ -0.22
ATG4D-211ENST00000589753 SH3PXD2BA1X283 911 aa13.65□□□□□ -0.22
ATG4D-211ENST00000589753 H0Y3Z8 333 aa13.65□□□□□ -0.22
ATG4D-211ENST00000589753 H0YC42 278 aa13.65□□□□□ -0.22
ATG4D-211ENST00000589753 TNFSF11O14788 317 aa13.65□□□□□ -0.22
ATG4D-211ENST00000589753 BCKDKO14874 412 aa13.65□□□□□ -0.22
ATG4D-211ENST00000589753 ZNHIT1O43257 154 aa13.65□□□□□ -0.22
ATG4D-211ENST00000589753 PIP5K1CO60331 668 aa13.65□□□□□ -0.22
ATG4D-211ENST00000589753 E2F6O75461 281 aa13.65□□□□□ -0.22
ATG4D-211ENST00000589753 AHSA1O95433 338 aa13.65□□□□□ -0.22
ATG4D-211ENST00000589753 DNAJA1P31689 397 aaKnown RBP13.65□□□□□ -0.22
ATG4D-211ENST00000589753 IDUAP35475 653 aa13.65□□□□□ -0.22
ATG4D-211ENST00000589753 RPS5P46782 204 aaKnown RBP13.65□□□□□ -0.22
ATG4D-211ENST00000589753 TPD52P55327 224 aaPredicted RBP13.65□□□□□ -0.22
ATG4D-211ENST00000589753 SRYQ05066 204 aa13.65□□□□□ -0.22
ATG4D-211ENST00000589753 MYBPHQ13203 477 aa13.65□□□□□ -0.22
ATG4D-211ENST00000589753 SEC23BQ15437 767 aa13.65□□□□□ -0.22
ATG4D-211ENST00000589753 CTU2Q2VPK5 515 aaKnown RBP13.65□□□□□ -0.22
ATG4D-211ENST00000589753 PDSS1Q5T2R2 415 aa13.65□□□□□ -0.22
ATG4D-211ENST00000589753 WLSQ5T9L3 541 aa13.65□□□□□ -0.22
ATG4D-211ENST00000589753 C1QL3Q5VWW1 255 aa13.65□□□□□ -0.22
ATG4D-211ENST00000589753 HMBOX1Q6NT76 420 aa13.65□□□□□ -0.22
ATG4D-211ENST00000589753 FGD2Q7Z6J4 655 aa13.65□□□□□ -0.22
ATG4D-211ENST00000589753 AMIGO2Q86SJ2 522 aa13.65□□□□□ -0.22
ATG4D-211ENST00000589753 CHERPQ8IWX8 916 aaKnown RBP13.65□□□□□ -0.22
ATG4D-211ENST00000589753 PM20D2Q8IYS1 436 aa13.65□□□□□ -0.22
ATG4D-211ENST00000589753 OR4K5Q8NGD3 323 aa13.65□□□□□ -0.22
ATG4D-211ENST00000589753 OR2V1Q8NHB1 315 aa13.65□□□□□ -0.22
ATG4D-211ENST00000589753 PFN4Q8NHR9 129 aa13.65□□□□□ -0.22
ATG4D-211ENST00000589753 KTI12Q96EK9 354 aaPredicted RBP13.65□□□□□ -0.22
ATG4D-211ENST00000589753 DNAJA3Q96EY1 480 aa13.65□□□□□ -0.22
ATG4D-211ENST00000589753 CENPNQ96H22 339 aaPredicted RBP13.65□□□□□ -0.22
ATG4D-211ENST00000589753 ADGRG7Q96K78 797 aa13.65□□□□□ -0.22
ATG4D-211ENST00000589753 PKP2Q99959 881 aa13.65□□□□□ -0.22
ATG4D-211ENST00000589753 KLHL4Q9C0H6 718 aa13.65□□□□□ -0.22
ATG4D-211ENST00000589753 PRDM14Q9GZV8 571 aa13.65□□□□□ -0.22
ATG4D-211ENST00000589753 SEMA6AQ9H2E6 1030 aa13.65□□□□□ -0.22
ATG4D-211ENST00000589753 NTN4Q9HB63 628 aa13.65□□□□□ -0.22
ATG4D-211ENST00000589753 MEPEQ9NQ76 525 aaPredicted RBP13.65□□□□□ -0.22
ATG4D-211ENST00000589753 CAMK2AQ9UQM7 478 aa13.65□□□□□ -0.22
ATG4D-211ENST00000589753 BOD1L1Q8NFC6 3051 aa13.64□□□□□ -0.23
ATG4D-211ENST00000589753 SULT2B1O00204 365 aa13.64□□□□□ -0.23
ATG4D-211ENST00000589753 OR2T1O43869 369 aa13.64□□□□□ -0.23
ATG4D-211ENST00000589753 OR10H3O60404 316 aa13.64□□□□□ -0.23
ATG4D-211ENST00000589753 CCNB2O95067 398 aa13.64□□□□□ -0.23
ATG4D-211ENST00000589753 PMS2P2O95744 297 aa13.64□□□□□ -0.23
ATG4D-211ENST00000589753 BAG2O95816 211 aa13.64□□□□□ -0.23
ATG4D-211ENST00000589753 PRB1P04280 392 aa13.64□□□□□ -0.23
ATG4D-211ENST00000589753 ABOP16442 354 aa13.64□□□□□ -0.23
ATG4D-211ENST00000589753 FPR1P21462 350 aa13.64□□□□□ -0.23
ATG4D-211ENST00000589753 DIO1P49895 249 aa13.64□□□□□ -0.23
ATG4D-211ENST00000589753 ARHGDIAP52565 204 aa13.64□□□□□ -0.23
ATG4D-211ENST00000589753 IST1P53990 364 aa13.64□□□□□ -0.23
ATG4D-211ENST00000589753 CLDN15P56746 228 aa13.64□□□□□ -0.23
ATG4D-211ENST00000589753 RPS3AP61247 264 aaKnown RBP13.64□□□□□ -0.23
ATG4D-211ENST00000589753 LSM11P83369 360 aaKnown RBP eCLIP13.64□□□□□ -0.232e-15■□□□□ 8.5
ATG4D-211ENST00000589753 PRKCDQ05655 676 aa13.64□□□□□ -0.23
ATG4D-211ENST00000589753 RBPJQ06330 500 aa13.64□□□□□ -0.23
ATG4D-211ENST00000589753 C19orf57Q0VDD7 668 aa13.64□□□□□ -0.23
ATG4D-211ENST00000589753 RCN1Q15293 331 aa13.64□□□□□ -0.23
ATG4D-211ENST00000589753 C3AR1Q16581 482 aa13.64□□□□□ -0.23
ATG4D-211ENST00000589753 MICAQ29983 383 aa13.64□□□□□ -0.23
ATG4D-211ENST00000589753 SOWAHCQ53LP3 525 aaPredicted RBP13.64□□□□□ -0.23
ATG4D-211ENST00000589753 FAM69AQ5T7M9 428 aa13.64□□□□□ -0.23
ATG4D-211ENST00000589753 HBMQ6B0K9 141 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms