RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	STX19	Q8N4C7	294 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	ENKUR	Q8TC29	256 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	DAZL	Q92904	295 aa	Known RBP	14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	PMEPA1	Q969W9	287 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	RHNO1	Q9BSD3	238 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	G6PC3	Q9BUM1	346 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	C14orf105	Q9NVL8	296 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	AASS	Q9UDR5	926 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	IDS	B3KWA1	339 aa		14.14	□□□□□ -0.15
DDX39A-209	ENST00000589318	OR5F1	O95221	314 aa		14.14	□□□□□ -0.15
DDX39A-209	ENST00000589318	TP53	P04637	393 aa	Predicted RBP	14.14	□□□□□ -0.15
DDX39A-209	ENST00000589318	ZNF806	P0C7X5	589 aa		14.14	□□□□□ -0.15
DDX39A-209	ENST00000589318	MMP11	P24347	488 aa		14.14	□□□□□ -0.15
DDX39A-209	ENST00000589318	GRK5	P34947	590 aa		14.14	□□□□□ -0.15
DDX39A-209	ENST00000589318	GGT2	P36268	569 aa		14.14	□□□□□ -0.15
DDX39A-209	ENST00000589318	GPR143	P51810	404 aa		14.14	□□□□□ -0.15
DDX39A-209	ENST00000589318	MC2R	Q01718	297 aa		14.14	□□□□□ -0.15
DDX39A-209	ENST00000589318	EBP	Q15125	230 aa	Known RBP	14.14	□□□□□ -0.15
DDX39A-209	ENST00000589318	PLEKHM3	Q6ZWE6	761 aa		14.14	□□□□□ -0.15
DDX39A-209	ENST00000589318	OR4C3	Q8NH37	302 aa		14.14	□□□□□ -0.15
DDX39A-209	ENST00000589318	CNOT9	Q92600	299 aa	Known RBP	14.14	□□□□□ -0.15
DDX39A-209	ENST00000589318	GGH	Q92820	318 aa		14.14	□□□□□ -0.15
DDX39A-209	ENST00000589318	UBE2F	Q969M7	185 aa		14.14	□□□□□ -0.15
DDX39A-209	ENST00000589318	SPSB2	Q99619	263 aa		14.14	□□□□□ -0.15
DDX39A-209	ENST00000589318	GPA33	Q99795	319 aa		14.14	□□□□□ -0.15
DDX39A-209	ENST00000589318	CDCA4	Q9BXL8	241 aa		14.14	□□□□□ -0.15
DDX39A-209	ENST00000589318	ANKRD19P	Q9H560	264 aa		14.14	□□□□□ -0.15
DDX39A-209	ENST00000589318	ZMAT5	Q9UDW3	170 aa	Known RBP	14.14	□□□□□ -0.15
DDX39A-209	ENST00000589318	OR10H1	Q9Y4A9	318 aa		14.14	□□□□□ -0.15
DDX39A-209	ENST00000589318	MEN1	O00255	615 aa		14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	TFEC	O14948	347 aa	Predicted RBP	14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	ADAM11	O75078	769 aa		14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	ETV1	P50549	477 aa		14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	PSPH	P78330	225 aa		14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	ST3GAL3	Q11203	375 aa		14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	FGFBP1	Q14512	234 aa		14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	TRAM2	Q15035	370 aa		14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	MZT2B	Q6NZ67	158 aa		14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	C1orf94	Q6P1W5	598 aa		14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	PLET1	Q6UQ28	207 aa		14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	GDF7	Q7Z4P5	450 aa		14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	LSR	Q86X29	649 aa	Predicted RBP	14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	NKAIN4	Q8IVV8	208 aa		14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	SUMF1	Q8NBK3	374 aa		14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	OR1N1	Q8NGS0	311 aa		14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	UBASH3B	Q8TF42	649 aa		14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	ARSG	Q96EG1	525 aa		14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	SLC41A3	Q96GZ6	507 aa		14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	SLC26A1	Q9H2B4	701 aa		14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	RASSF1	Q9NS23	344 aa		14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	DNAJB12	Q9NXW2	375 aa	Known RBP	14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	CNOT2	Q9NZN8	540 aa	Known RBP	14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	CMAHP	Q9Y471	501 aa		14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	HEATR5A	Q86XA9	2040 aa		14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	IGHV3-20	A0A0C4DH32	117 aa		14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	SYNDIG1L	A6NDD5	238 aa		14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	FRG2C	A6NGY1	282 aa		14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	HCN1	O60741	890 aa		14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	FMO6P	O60774	539 aa		14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	SLC22A5	O76082	557 aa		14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	LYPD3	O95274	346 aa		14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	C21orf33	P30042	268 aa	Predicted RBP	14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	CCKBR	P32239	447 aa		14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	ATP12A	P54707	1039 aa		14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	MRPL28	Q13084	256 aa	Known RBP	14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	MFSD13A	Q14CX5	517 aa		14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	BAK1	Q16611	211 aa		14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	MRPL14	Q6P1L8	145 aa	Known RBP	14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	CD300LD	Q6UXZ3	194 aa		14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	ANKRD37	Q7Z713	158 aa		14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	GPALPP1	Q8IXQ4	340 aa		14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	LINC00471	Q8N535	108 aa		14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	OR4M1	Q8NGD0	313 aa		14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	LCOR	Q96JN0	433 aa	Predicted RBP	14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	ART5	Q96L15	291 aa		14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	DCLRE1C	Q96SD1	692 aa	Known RBP	14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	KCNS3	Q9BQ31	491 aa		14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	MMP28	Q9H239	520 aa		14.13	□□□□□ -0.15
DDX39A-209	ENST00000589318	SH3D21	A4FU49	640 aa		14.12	□□□□□ -0.15
DDX39A-209	ENST00000589318	ZAR1L	A6NP61	321 aa		14.12	□□□□□ -0.15
DDX39A-209	ENST00000589318	RGS5	O15539	181 aa		14.12	□□□□□ -0.15
DDX39A-209	ENST00000589318	OSM	P13725	252 aa		14.12	□□□□□ -0.15
DDX39A-209	ENST00000589318	ACAA2	P42765	397 aa	Known RBP	14.12	□□□□□ -0.15
DDX39A-209	ENST00000589318	CRISP1	P54107	249 aa		14.12	□□□□□ -0.15
DDX39A-209	ENST00000589318	PTGES3	Q15185	160 aa	Known RBP	14.12	□□□□□ -0.15
DDX39A-209	ENST00000589318	ZNF79	Q15937	498 aa		14.12	□□□□□ -0.15
DDX39A-209	ENST00000589318	GLYR1	Q49A26	553 aa	Predicted RBP	14.12	□□□□□ -0.15
DDX39A-209	ENST00000589318	PXDC1	Q5TGL8	231 aa		14.12	□□□□□ -0.15
DDX39A-209	ENST00000589318	RANBP3L	Q86VV4	465 aa	Predicted RBP	14.12	□□□□□ -0.15
DDX39A-209	ENST00000589318	NAXD	Q8IW45	347 aa		14.12	□□□□□ -0.15
DDX39A-209	ENST00000589318	ZNF614	Q8N883	585 aa		14.12	□□□□□ -0.15
DDX39A-209	ENST00000589318	DUSP18	Q8NEJ0	188 aa		14.12	□□□□□ -0.15
DDX39A-209	ENST00000589318	OR10Z1	Q8NGY1	313 aa		14.12	□□□□□ -0.15
DDX39A-209	ENST00000589318	GIMAP1	Q8WWP7	306 aa		14.12	□□□□□ -0.15
DDX39A-209	ENST00000589318	PRSS27	Q9BQR3	290 aa		14.12	□□□□□ -0.15
DDX39A-209	ENST00000589318	POLR2J2	Q9GZM3	115 aa	Known RBP	14.12	□□□□□ -0.15
DDX39A-209	ENST00000589318	POLR2J3	Q9H1A7	115 aa	Known RBP	14.12	□□□□□ -0.15
DDX39A-209	ENST00000589318	PPA2	Q9H2U2	334 aa		14.12	□□□□□ -0.15
DDX39A-209	ENST00000589318	FLRT3	Q9NZU0	649 aa		14.12	□□□□□ -0.15
DDX39A-209	ENST00000589318	TES	Q9UGI8	421 aa	Known RBP	14.12	□□□□□ -0.15

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms