RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 HS3ST6Q96QI5 342 aa17.35■□□□□ 0.37
TPM4-208ENST00000588410 USB1Q9BQ65 265 aaKnown RBP17.35■□□□□ 0.37
TPM4-208ENST00000588410 NAA11Q9BSU3 229 aaPredicted RBP17.35■□□□□ 0.37
TPM4-208ENST00000588410 BCL2L10Q9HD36 194 aa17.35■□□□□ 0.37
TPM4-208ENST00000588410 SLC25A37Q9NYZ2 338 aa17.35■□□□□ 0.37
TPM4-208ENST00000588410 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.35■□□□□ 0.37
TPM4-208ENST00000588410 PRSS50Q9UI38 385 aa17.35■□□□□ 0.37
TPM4-208ENST00000588410 DCTN4Q9UJW0 460 aa17.35■□□□□ 0.37
TPM4-208ENST00000588410 NOSIPQ9Y314 301 aaKnown RBP17.35■□□□□ 0.37
TPM4-208ENST00000588410 IGKV3D-15A0A087WSY6 115 aa17.34■□□□□ 0.37
TPM4-208ENST00000588410 ZNF814B7Z6K7 855 aa17.34■□□□□ 0.37
TPM4-208ENST00000588410 KLF4O43474 513 aa17.34■□□□□ 0.37
TPM4-208ENST00000588410 BMP2P12643 396 aa17.34■□□□□ 0.37
TPM4-208ENST00000588410 CD99P14209 185 aa17.34■□□□□ 0.37
TPM4-208ENST00000588410 CAPRIN1Q14444 709 aaKnown RBP17.34■□□□□ 0.37
TPM4-208ENST00000588410 PAGE3Q5JUK9 113 aa17.34■□□□□ 0.37
TPM4-208ENST00000588410 BHLHA15Q7RTS1 189 aaPredicted RBP17.34■□□□□ 0.37
TPM4-208ENST00000588410 TGIF2LYQ8IUE0 185 aa17.34■□□□□ 0.37
TPM4-208ENST00000588410 CLIP4Q8N3C7 705 aa17.34■□□□□ 0.37
TPM4-208ENST00000588410 STON2Q8WXE9 905 aa17.34■□□□□ 0.37
TPM4-208ENST00000588410 HSD17B8Q92506 261 aa17.34■□□□□ 0.37
TPM4-208ENST00000588410 PIGTQ969N2 578 aa17.34■□□□□ 0.37
TPM4-208ENST00000588410 ADAM19Q9H013 955 aa17.34■□□□□ 0.37
TPM4-208ENST00000588410 NPHS2Q9NP85 383 aa17.34■□□□□ 0.37
TPM4-208ENST00000588410 NGBQ9NPG2 151 aa17.34■□□□□ 0.37
TPM4-208ENST00000588410 SLAMF8Q9P0V8 285 aa17.34■□□□□ 0.37
TPM4-208ENST00000588410 CORO2BQ9UQ03 480 aa17.34■□□□□ 0.37
TPM4-208ENST00000588410 A0A1W2PP18 115 aa17.33■□□□□ 0.36
TPM4-208ENST00000588410 EVPLLA8MZ36 301 aa17.33■□□□□ 0.36
TPM4-208ENST00000588410 EDF1O60869 148 aaKnown RBP17.33■□□□□ 0.36
TPM4-208ENST00000588410 SASH3O75995 380 aa17.33■□□□□ 0.36
TPM4-208ENST00000588410 HOXB9P17482 250 aaPredicted RBP17.33■□□□□ 0.36
TPM4-208ENST00000588410 IDUAP35475 653 aa17.33■□□□□ 0.36
TPM4-208ENST00000588410 ACAA2P42765 397 aaKnown RBP17.33■□□□□ 0.36
TPM4-208ENST00000588410 C20orf204Q6ZNR8 217 aa17.33■□□□□ 0.36
TPM4-208ENST00000588410 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.33■□□□□ 0.36
TPM4-208ENST00000588410 MSRB3Q8IXL7 192 aa17.33■□□□□ 0.36
TPM4-208ENST00000588410 UBE2J2Q8N2K1 259 aa17.33■□□□□ 0.36
TPM4-208ENST00000588410 NFKBIDQ8NI38 313 aa17.33■□□□□ 0.36
TPM4-208ENST00000588410 APH1AQ96BI3 265 aa17.33■□□□□ 0.36
TPM4-208ENST00000588410 PLPPR2Q96GM1 343 aa17.33■□□□□ 0.36
TPM4-208ENST00000588410 SIKE1Q9BRV8 207 aa17.33■□□□□ 0.36
TPM4-208ENST00000588410 ZNF716A6NP11 495 aa17.32■□□□□ 0.36
TPM4-208ENST00000588410 PGM3O95394 542 aa17.32■□□□□ 0.36
TPM4-208ENST00000588410 CNOT4O95628 575 aaKnown RBP17.32■□□□□ 0.36
TPM4-208ENST00000588410 IMPDH2P12268 514 aa17.32■□□□□ 0.36
TPM4-208ENST00000588410 LOXP28300 417 aaPredicted RBP17.32■□□□□ 0.36
TPM4-208ENST00000588410 ZNF704Q6ZNC4 412 aaPredicted RBP17.32■□□□□ 0.36
TPM4-208ENST00000588410 SERPINA11Q86U17 422 aa17.32■□□□□ 0.36
TPM4-208ENST00000588410 KRT73Q86Y46 540 aa17.32■□□□□ 0.36
TPM4-208ENST00000588410 CCDC103Q8IW40 242 aa17.32■□□□□ 0.36
TPM4-208ENST00000588410 CCL19Q99731 98 aa17.32■□□□□ 0.36
TPM4-208ENST00000588410 SPATA5L1Q9BVQ7 753 aa17.32■□□□□ 0.36
TPM4-208ENST00000588410 TAPBPLQ9BX59 468 aa17.32■□□□□ 0.36
TPM4-208ENST00000588410 POTEKPQ9BYX7 375 aa17.32■□□□□ 0.36
TPM4-208ENST00000588410 SLC52A3Q9NQ40 469 aa17.32■□□□□ 0.36
TPM4-208ENST00000588410 VAPAQ9P0L0 249 aa17.32■□□□□ 0.36
TPM4-208ENST00000588410 LEF1Q9UJU2 399 aaPredicted RBP17.32■□□□□ 0.36
TPM4-208ENST00000588410 A0A0G2JND7 137 aa17.31■□□□□ 0.36
TPM4-208ENST00000588410 ZC3H12DA2A288 527 aaKnown RBP17.31■□□□□ 0.36
TPM4-208ENST00000588410 ANGPT2O15123 496 aa17.31■□□□□ 0.36
TPM4-208ENST00000588410 SMPD2O60906 423 aa17.31■□□□□ 0.36
TPM4-208ENST00000588410 MRPL33O75394 65 aaKnown RBP17.31■□□□□ 0.36
TPM4-208ENST00000588410 LYZL6O75951 148 aa17.31■□□□□ 0.36
TPM4-208ENST00000588410 GPIP06744 558 aa17.31■□□□□ 0.36
TPM4-208ENST00000588410 ARAFP10398 606 aa17.31■□□□□ 0.36
TPM4-208ENST00000588410 PRG2P13727 222 aa17.31■□□□□ 0.36
TPM4-208ENST00000588410 ETS2P15036 469 aa17.31■□□□□ 0.36
TPM4-208ENST00000588410 SLC16A1P53985 500 aa17.31■□□□□ 0.36
TPM4-208ENST00000588410 CDK6Q00534 326 aa17.31■□□□□ 0.36
TPM4-208ENST00000588410 TAB1Q15750 504 aa17.31■□□□□ 0.36
TPM4-208ENST00000588410 STK11Q15831 433 aa17.31■□□□□ 0.36
TPM4-208ENST00000588410 FBXW9Q5XUX1 488 aa17.31■□□□□ 0.36
TPM4-208ENST00000588410 REEP3Q6NUK4 255 aa17.31■□□□□ 0.36
TPM4-208ENST00000588410 RPS6KB2Q9UBS0 482 aa17.31■□□□□ 0.36
TPM4-208ENST00000588410 NDUFAF1Q9Y375 327 aa17.31■□□□□ 0.36
TPM4-208ENST00000588410 A8MVM7 634 aa17.3■□□□□ 0.36
TPM4-208ENST00000588410 IGHV3-9P01782 118 aa17.3■□□□□ 0.36
TPM4-208ENST00000588410 GGT1P19440 569 aa17.3■□□□□ 0.36
TPM4-208ENST00000588410 SLC6A2P23975 617 aa17.3■□□□□ 0.36
TPM4-208ENST00000588410 EDNRAP25101 427 aa17.3■□□□□ 0.36
TPM4-208ENST00000588410 PRKAR1BP31321 381 aa17.3■□□□□ 0.36
TPM4-208ENST00000588410 NKX6-1P78426 367 aaPredicted RBP17.3■□□□□ 0.36
TPM4-208ENST00000588410 H3F3AP84243 136 aa17.3■□□□□ 0.36
TPM4-208ENST00000588410 BNIP2Q12982 314 aa17.3■□□□□ 0.36
TPM4-208ENST00000588410 CEACAM7Q14002 265 aa17.3■□□□□ 0.36
TPM4-208ENST00000588410 OR7A5Q15622 319 aa17.3■□□□□ 0.36
TPM4-208ENST00000588410 PAQR6Q6TCH4 344 aa17.3■□□□□ 0.36
TPM4-208ENST00000588410 CASP12Q6UXS9 341 aa17.3■□□□□ 0.36
TPM4-208ENST00000588410 P3H2Q8IVL5 708 aa17.3■□□□□ 0.36
TPM4-208ENST00000588410 SLC35B4Q969S0 331 aa17.3■□□□□ 0.36
TPM4-208ENST00000588410 MUCL1Q96DR8 90 aa17.3■□□□□ 0.36
TPM4-208ENST00000588410 PIP5K1AQ99755 562 aa17.3■□□□□ 0.36
TPM4-208ENST00000588410 TMUB1Q9BVT8 246 aa17.3■□□□□ 0.36
TPM4-208ENST00000588410 ESRP2Q9H6T0 727 aaKnown RBP17.3■□□□□ 0.36
TPM4-208ENST00000588410 PARPBPQ9NWS1 579 aa17.3■□□□□ 0.36
TPM4-208ENST00000588410 SLC9A8Q9Y2E8 581 aa17.3■□□□□ 0.36
TPM4-208ENST00000588410 CHST2Q9Y4C5 530 aa17.3■□□□□ 0.36
TPM4-208ENST00000588410 GMEB1Q9Y692 573 aa17.3■□□□□ 0.36
TPM4-208ENST00000588410 TRBV5-3A0A0A0MS03 114 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms