RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 FBXO27Q8NI29 283 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 CPNE4Q96A23 557 aaPredicted RBP7.54□□□□□ -1.2
SDF2-204ENST00000587338 PPCDCQ96CD2 204 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 SLC7A6OSQ96CW6 309 aaPredicted RBP7.54□□□□□ -1.2
SDF2-204ENST00000587338 SH3YL1Q96HL8 342 aaPredicted RBP7.54□□□□□ -1.2
SDF2-204ENST00000587338 OR52E6Q96RD3 313 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 BBS4Q96RK4 519 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 THTPAQ9BU02 230 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 REEP4Q9H6H4 257 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 RMND5AQ9H871 391 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 MYNNQ9NPC7 610 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 TIGARQ9NQ88 270 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 SLC35C2Q9NQQ7 365 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 DDX18Q9NVP1 670 aaKnown RBP7.54□□□□□ -1.2
SDF2-204ENST00000587338 GID8Q9NWU2 228 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 TAS2R1Q9NYW7 299 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 PRSS50Q9UI38 385 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 FKBP7Q9Y680 259 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 GXYLT2A0PJZ3 443 aa7.53□□□□□ -1.2
SDF2-204ENST00000587338 C7orf72A4D263 438 aa7.53□□□□□ -1.2
SDF2-204ENST00000587338 VWC2LB2RUY7 222 aa7.53□□□□□ -1.2
SDF2-204ENST00000587338 H0YHG0 523 aa7.53□□□□□ -1.2
SDF2-204ENST00000587338 FBP2O00757 339 aa7.53□□□□□ -1.2
SDF2-204ENST00000587338 DNAJC8O75937 253 aaPredicted RBP7.53□□□□□ -1.2
SDF2-204ENST00000587338 PRKD3O94806 890 aa7.53□□□□□ -1.2
SDF2-204ENST00000587338 KCNH1O95259 989 aa7.53□□□□□ -1.2
SDF2-204ENST00000587338 IGKV1D-16P01601 117 aa7.53□□□□□ -1.2
SDF2-204ENST00000587338 DDX5P17844 614 aaKnown RBP7.53□□□□□ -1.2
SDF2-204ENST00000587338 EFNA1P20827 205 aaPredicted RBP7.53□□□□□ -1.2
SDF2-204ENST00000587338 PTAFRP25105 342 aa7.53□□□□□ -1.2
SDF2-204ENST00000587338 MPIP34949 423 aa7.53□□□□□ -1.2
SDF2-204ENST00000587338 PGM1P36871 562 aa7.53□□□□□ -1.2
SDF2-204ENST00000587338 NCBP2P52298 156 aaKnown RBP eCLIP7.53□□□□□ -1.2
SDF2-204ENST00000587338 CHRNEQ04844 493 aa7.53□□□□□ -1.2
SDF2-204ENST00000587338 CHRNB3Q05901 458 aa7.53□□□□□ -1.2
SDF2-204ENST00000587338 FOXF1Q12946 379 aa7.53□□□□□ -1.2
SDF2-204ENST00000587338 HEPACAMQ14CZ8 416 aa7.53□□□□□ -1.2
SDF2-204ENST00000587338 PAGE3Q5JUK9 113 aa7.53□□□□□ -1.2
SDF2-204ENST00000587338 OR4F3Q6IEY1 312 aa7.53□□□□□ -1.2
SDF2-204ENST00000587338 FAM71E1Q6IPT2 247 aa7.53□□□□□ -1.2
SDF2-204ENST00000587338 ZNF544Q6NX49 715 aa7.53□□□□□ -1.2
SDF2-204ENST00000587338 RETREG3Q86VR2 466 aa7.53□□□□□ -1.2
SDF2-204ENST00000587338 ANKRD46Q86W74 232 aa7.53□□□□□ -1.2
SDF2-204ENST00000587338 DEFB107AQ8IZN7 70 aa7.53□□□□□ -1.2
SDF2-204ENST00000587338 ATP6V1C2Q8NEY4 427 aa7.53□□□□□ -1.2
SDF2-204ENST00000587338 VPS37AQ8NEZ2 397 aa7.53□□□□□ -1.2
SDF2-204ENST00000587338 OR52N5Q8NH56 324 aa7.53□□□□□ -1.2
SDF2-204ENST00000587338 POC1BQ8TC44 478 aa7.53□□□□□ -1.2
SDF2-204ENST00000587338 TSPEARQ8WU66 669 aa7.53□□□□□ -1.2
SDF2-204ENST00000587338 RAB3IPQ96QF0 476 aaPredicted RBP7.53□□□□□ -1.2
SDF2-204ENST00000587338 KLHDC3Q9BQ90 382 aa7.53□□□□□ -1.2
SDF2-204ENST00000587338 DUSP26Q9BV47 211 aa7.53□□□□□ -1.2
SDF2-204ENST00000587338 LRMDAQ9H2I8 198 aa7.53□□□□□ -1.2
SDF2-204ENST00000587338 OCEL1Q9H607 264 aa7.53□□□□□ -1.2
SDF2-204ENST00000587338 GP6Q9HCN6 339 aa7.53□□□□□ -1.2
SDF2-204ENST00000587338 EQTNQ9NQ60 294 aa7.53□□□□□ -1.2
SDF2-204ENST00000587338 ATAD3AQ9NVI7 634 aa7.53□□□□□ -1.2
SDF2-204ENST00000587338 TMEM45AQ9NWC5 275 aa7.53□□□□□ -1.2
SDF2-204ENST00000587338 SIRT5Q9NXA8 310 aa7.53□□□□□ -1.2
SDF2-204ENST00000587338 NDE1Q9NXR1 346 aa7.53□□□□□ -1.2
SDF2-204ENST00000587338 ADA2Q9NZK5 511 aa7.53□□□□□ -1.2
SDF2-204ENST00000587338 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.53□□□□□ -1.2
SDF2-204ENST00000587338 MGAT4BQ9UQ53 548 aa7.53□□□□□ -1.2
SDF2-204ENST00000587338 ATP23Q9Y6H3 246 aa7.53□□□□□ -1.2
SDF2-204ENST00000587338 PMF1-BGLAPU3KQ54 211 aa7.53□□□□□ -1.2
SDF2-204ENST00000587338 A0A087WV62 115 aa7.52□□□□□ -1.21
SDF2-204ENST00000587338 IGHV3-15A0A0B4J1V0 119 aa7.52□□□□□ -1.21
SDF2-204ENST00000587338 A0A1W2PR80 420 aa7.52□□□□□ -1.21
SDF2-204ENST00000587338 CFAP73A6NFT4 308 aa7.52□□□□□ -1.21
SDF2-204ENST00000587338 OR5H1A6NKK0 313 aa7.52□□□□□ -1.21
SDF2-204ENST00000587338 ALG1L2C9J202 215 aa7.52□□□□□ -1.21
SDF2-204ENST00000587338 M0R1B8 84 aa7.52□□□□□ -1.21
SDF2-204ENST00000587338 NDUFS8O00217 210 aa7.52□□□□□ -1.21
SDF2-204ENST00000587338 UPK1AO00322 258 aa7.52□□□□□ -1.21
SDF2-204ENST00000587338 GSC2O15499 205 aa7.52□□□□□ -1.21
SDF2-204ENST00000587338 RAD51DO75771 328 aa7.52□□□□□ -1.21
SDF2-204ENST00000587338 VENTXO95231 258 aa7.52□□□□□ -1.21
SDF2-204ENST00000587338 OXSR1O95747 527 aaPredicted RBP7.52□□□□□ -1.21
SDF2-204ENST00000587338 GSNP06396 782 aa7.52□□□□□ -1.21
SDF2-204ENST00000587338 LAMP1P11279 417 aa7.52□□□□□ -1.21
SDF2-204ENST00000587338 NQO1P15559 274 aaKnown RBP7.52□□□□□ -1.21
SDF2-204ENST00000587338 ZNF23P17027 643 aa7.52□□□□□ -1.21
SDF2-204ENST00000587338 COX5AP20674 150 aa7.52□□□□□ -1.21
SDF2-204ENST00000587338 ENPP1P22413 925 aa7.52□□□□□ -1.21
SDF2-204ENST00000587338 IGHV1-2P23083 117 aa7.52□□□□□ -1.21
SDF2-204ENST00000587338 EDNRAP25101 427 aa7.52□□□□□ -1.21
SDF2-204ENST00000587338 CD40P25942 277 aa7.52□□□□□ -1.21
SDF2-204ENST00000587338 GABRA3P34903 492 aa7.52□□□□□ -1.21
SDF2-204ENST00000587338 GSTM5P46439 218 aa7.52□□□□□ -1.21
SDF2-204ENST00000587338 OR3A2P47893 321 aa7.52□□□□□ -1.21
SDF2-204ENST00000587338 PRIM2P49643 509 aa7.52□□□□□ -1.21
SDF2-204ENST00000587338 MANFP55145 182 aaKnown RBP7.52□□□□□ -1.21
SDF2-204ENST00000587338 PSME3P61289 254 aa7.52□□□□□ -1.21
SDF2-204ENST00000587338 DPY19L1Q2PZI1 675 aa7.52□□□□□ -1.21
SDF2-204ENST00000587338 ANXA8L1Q5VT79 327 aa7.52□□□□□ -1.21
SDF2-204ENST00000587338 KLHL17Q6TDP4 642 aa7.52□□□□□ -1.21
SDF2-204ENST00000587338 IKBIPQ70UQ0 350 aa7.52□□□□□ -1.21
SDF2-204ENST00000587338 SSX8Q7RTT4 187 aa7.52□□□□□ -1.21
SDF2-204ENST00000587338 DHDDSQ86SQ9 333 aa7.52□□□□□ -1.21
SDF2-204ENST00000587338 P2RY8Q86VZ1 359 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms