RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 MUS81Q96NY9 551 aa17.01■□□□□ 0.31
TRAF4-216ENST00000586813 TMEM181Q9P2C4 612 aa17.01■□□□□ 0.31
TRAF4-216ENST00000586813 MARCOQ9UEW3 520 aaPredicted RBP17.01■□□□□ 0.31
TRAF4-216ENST00000586813 STAB1Q9NY15 2570 aa17.01■□□□□ 0.31
TRAF4-216ENST00000586813 FAM234BA2RU67 622 aa17■□□□□ 0.31
TRAF4-216ENST00000586813 M0R1B8 84 aa17■□□□□ 0.31
TRAF4-216ENST00000586813 IFNA2P01563 188 aa17■□□□□ 0.31
TRAF4-216ENST00000586813 MYZAPP0CAP1 466 aa17■□□□□ 0.31
TRAF4-216ENST00000586813 CCNA2P20248 432 aa17■□□□□ 0.31
TRAF4-216ENST00000586813 CHI3L1P36222 383 aaPredicted RBP17■□□□□ 0.31
TRAF4-216ENST00000586813 IDH2P48735 452 aaKnown RBP17■□□□□ 0.31
TRAF4-216ENST00000586813 ABCE1P61221 599 aaKnown RBP17■□□□□ 0.31
TRAF4-216ENST00000586813 H3F3AP84243 136 aa17■□□□□ 0.31
TRAF4-216ENST00000586813 CASP8Q14790 479 aa17■□□□□ 0.31
TRAF4-216ENST00000586813 CHI3L2Q15782 390 aa17■□□□□ 0.31
TRAF4-216ENST00000586813 SPANXN4Q5MJ08 99 aa17■□□□□ 0.31
TRAF4-216ENST00000586813 C6orf52Q5T4I8 152 aa17■□□□□ 0.31
TRAF4-216ENST00000586813 CASP12Q6UXS9 341 aa17■□□□□ 0.31
TRAF4-216ENST00000586813 LSRQ86X29 649 aaPredicted RBP17■□□□□ 0.31
TRAF4-216ENST00000586813 FBXL14Q8N1E6 418 aa17■□□□□ 0.31
TRAF4-216ENST00000586813 OR52E4Q8NGH9 312 aa17■□□□□ 0.31
TRAF4-216ENST00000586813 HTRA1Q92743 480 aa17■□□□□ 0.31
TRAF4-216ENST00000586813 SLC35A5Q9BS91 424 aa17■□□□□ 0.31
TRAF4-216ENST00000586813 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17■□□□□ 0.31
TRAF4-216ENST00000586813 TRAPPC4Q9Y296 219 aa17■□□□□ 0.31
TRAF4-216ENST00000586813 WDR91A4D1P6 747 aa16.99■□□□□ 0.31
TRAF4-216ENST00000586813 RNF212BA8MTL3 300 aa16.99■□□□□ 0.31
TRAF4-216ENST00000586813 PDLIM1O00151 329 aa16.99■□□□□ 0.31
TRAF4-216ENST00000586813 HMGN4O00479 90 aa16.99■□□□□ 0.31
TRAF4-216ENST00000586813 AP3D1O14617 1153 aa16.99■□□□□ 0.31
TRAF4-216ENST00000586813 C1QCP02747 245 aa16.99■□□□□ 0.31
TRAF4-216ENST00000586813 HTR3AP46098 478 aa16.99■□□□□ 0.31
TRAF4-216ENST00000586813 FABP6P51161 128 aa16.99■□□□□ 0.31
TRAF4-216ENST00000586813 DSCR9P59020 149 aa16.99■□□□□ 0.31
TRAF4-216ENST00000586813 DPY19L1Q2PZI1 675 aa16.99■□□□□ 0.31
TRAF4-216ENST00000586813 TMEM249Q2WGJ8 235 aa16.99■□□□□ 0.31
TRAF4-216ENST00000586813 CHRFAM7AQ494W8 412 aa16.99■□□□□ 0.31
TRAF4-216ENST00000586813 DEPDC4Q8N2C3 294 aa16.99■□□□□ 0.31
TRAF4-216ENST00000586813 CNOT9Q92600 299 aaKnown RBP16.99■□□□□ 0.31
TRAF4-216ENST00000586813 INPP5KQ9BT40 448 aa16.99■□□□□ 0.31
TRAF4-216ENST00000586813 AMBRA1Q9C0C7 1298 aa16.99■□□□□ 0.31
TRAF4-216ENST00000586813 C20orf27Q9GZN8 174 aa16.99■□□□□ 0.31
TRAF4-216ENST00000586813 SLC9A8Q9Y2E8 581 aa16.99■□□□□ 0.31
TRAF4-216ENST00000586813 RAP2CQ9Y3L5 183 aa16.99■□□□□ 0.31
TRAF4-216ENST00000586813 TMED7-TICAM2A0A0A6YYA0 188 aa16.98■□□□□ 0.31
TRAF4-216ENST00000586813 E9PBE3 544 aa16.98■□□□□ 0.31
TRAF4-216ENST00000586813 H7C417 338 aa16.98■□□□□ 0.31
TRAF4-216ENST00000586813 IMPDH2P12268 514 aa16.98■□□□□ 0.31
TRAF4-216ENST00000586813 POLR2HP52434 150 aaKnown RBP16.98■□□□□ 0.31
TRAF4-216ENST00000586813 CLNS1AP54105 237 aaKnown RBP16.98■□□□□ 0.31
TRAF4-216ENST00000586813 SLC35A1P78382 337 aa16.98■□□□□ 0.31
TRAF4-216ENST00000586813 RAB35Q15286 201 aa16.98■□□□□ 0.31
TRAF4-216ENST00000586813 FAM174BQ3ZCQ3 159 aa16.98■□□□□ 0.31
TRAF4-216ENST00000586813 C9orf135Q5VTT2 229 aa16.98■□□□□ 0.31
TRAF4-216ENST00000586813 ZNF544Q6NX49 715 aa16.98■□□□□ 0.31
TRAF4-216ENST00000586813 CMIPQ8IY22 773 aa16.98■□□□□ 0.31
TRAF4-216ENST00000586813 C17orf78Q8N4C9 275 aa16.98■□□□□ 0.31
TRAF4-216ENST00000586813 ZNF525Q8N782 197 aa16.98■□□□□ 0.31
TRAF4-216ENST00000586813 WDR31Q8NA23 367 aa16.98■□□□□ 0.31
TRAF4-216ENST00000586813 C1orf162Q8NEQ5 155 aaPredicted RBP16.98■□□□□ 0.31
TRAF4-216ENST00000586813 AENQ8WTP8 325 aaKnown RBP16.98■□□□□ 0.31
TRAF4-216ENST00000586813 DDIT4LQ96D03 193 aa16.98■□□□□ 0.31
TRAF4-216ENST00000586813 TNFRSF13CQ96RJ3 184 aa16.98■□□□□ 0.31
TRAF4-216ENST00000586813 C1QTNF6Q9BXI9 259 aa16.98■□□□□ 0.31
TRAF4-216ENST00000586813 SLC38A1Q9H2H9 487 aa16.98■□□□□ 0.31
TRAF4-216ENST00000586813 SLC7A10Q9NS82 523 aa16.98■□□□□ 0.31
TRAF4-216ENST00000586813 DCTN4Q9UJW0 460 aa16.98■□□□□ 0.31
TRAF4-216ENST00000586813 OSGIN1Q9UJX0 560 aa16.98■□□□□ 0.31
TRAF4-216ENST00000586813 TMED7Q9Y3B3 224 aa16.98■□□□□ 0.31
TRAF4-216ENST00000586813 FLVCR1Q9Y5Y0 555 aa16.98■□□□□ 0.31
TRAF4-216ENST00000586813 TMEM72A0PK05 275 aa16.97■□□□□ 0.31
TRAF4-216ENST00000586813 AGAP5A6NIR3 686 aa16.97■□□□□ 0.31
TRAF4-216ENST00000586813 ELOA3DA6NLF2 546 aaPredicted RBP16.97■□□□□ 0.31
TRAF4-216ENST00000586813 ZNF208O43345 1280 aa16.97■□□□□ 0.31
TRAF4-216ENST00000586813 EIF1BO60739 113 aaKnown RBP16.97■□□□□ 0.31
TRAF4-216ENST00000586813 TACR3P29371 465 aa16.97■□□□□ 0.31
TRAF4-216ENST00000586813 RPL14P50914 215 aaKnown RBP16.97■□□□□ 0.31
TRAF4-216ENST00000586813 SLC25A3Q00325 362 aa16.97■□□□□ 0.31
TRAF4-216ENST00000586813 LOXL1Q08397 574 aaPredicted RBP16.97■□□□□ 0.31
TRAF4-216ENST00000586813 SLC17A1Q14916 467 aa16.97■□□□□ 0.31
TRAF4-216ENST00000586813 SYPL1Q16563 259 aa16.97■□□□□ 0.31
TRAF4-216ENST00000586813 ELOA3BQ3SY89 546 aa16.97■□□□□ 0.31
TRAF4-216ENST00000586813 RNF130Q86XS8 419 aa16.97■□□□□ 0.31
TRAF4-216ENST00000586813 PHC2Q8IXK0 858 aa16.97■□□□□ 0.31
TRAF4-216ENST00000586813 LRRC34Q8IZ02 419 aa16.97■□□□□ 0.31
TRAF4-216ENST00000586813 ANKFN1Q8N957 763 aa16.97■□□□□ 0.31
TRAF4-216ENST00000586813 ELOA3Q8NG57 546 aa16.97■□□□□ 0.31
TRAF4-216ENST00000586813 CCDC115Q96NT0 180 aa16.97■□□□□ 0.31
TRAF4-216ENST00000586813 TRNT1Q96Q11 434 aaKnown RBP16.97■□□□□ 0.31
TRAF4-216ENST00000586813 SORT1Q99523 831 aa16.97■□□□□ 0.31
TRAF4-216ENST00000586813 NAA11Q9BSU3 229 aaPredicted RBP16.97■□□□□ 0.31
TRAF4-216ENST00000586813 NUF2Q9BZD4 464 aa16.97■□□□□ 0.31
TRAF4-216ENST00000586813 SLC17A5Q9NRA2 495 aa16.97■□□□□ 0.31
TRAF4-216ENST00000586813 PARPBPQ9NWS1 579 aa16.97■□□□□ 0.31
TRAF4-216ENST00000586813 UPB1Q9UBR1 384 aa16.97■□□□□ 0.31
TRAF4-216ENST00000586813 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.97■□□□□ 0.31
TRAF4-216ENST00000586813 AMDHD2Q9Y303 409 aa16.97■□□□□ 0.31
TRAF4-216ENST00000586813 ARFGEF3Q5TH69 2177 aa16.96■□□□□ 0.31
TRAF4-216ENST00000586813 ZC3H12DA2A288 527 aaKnown RBP16.96■□□□□ 0.31
TRAF4-216ENST00000586813 FAAHO00519 579 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms