RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 GMPR2Q9P2T1 348 aaKnown RBP12.36□□□□□ -0.43
PRKCSH-202ENST00000585540 BAG5Q9UL15 447 aa12.36□□□□□ -0.43
PRKCSH-202ENST00000585540 CHST2Q9Y4C5 530 aa12.36□□□□□ -0.43
PRKCSH-202ENST00000585540 FLNBO75369 2602 aaKnown RBP12.36□□□□□ -0.43
PRKCSH-202ENST00000585540 COL12A1Q99715 3063 aa12.35□□□□□ -0.43
PRKCSH-202ENST00000585540 CCT8L1PA6NM43 557 aa12.35□□□□□ -0.43
PRKCSH-202ENST00000585540 ZNF724A8MTY0 619 aa12.35□□□□□ -0.43
PRKCSH-202ENST00000585540 A8MVM7 634 aa12.35□□□□□ -0.43
PRKCSH-202ENST00000585540 A8MXE2 369 aa12.35□□□□□ -0.43
PRKCSH-202ENST00000585540 GPR171O14626 319 aa12.35□□□□□ -0.43
PRKCSH-202ENST00000585540 CYTIPO60759 359 aa12.35□□□□□ -0.43
PRKCSH-202ENST00000585540 ADAM11O75078 769 aa12.35□□□□□ -0.43
PRKCSH-202ENST00000585540 CNOT4O95628 575 aaKnown RBP12.35□□□□□ -0.43
PRKCSH-202ENST00000585540 LGI1O95970 557 aa12.35□□□□□ -0.43
PRKCSH-202ENST00000585540 GKN3PP0CG01 181 aa12.35□□□□□ -0.43
PRKCSH-202ENST00000585540 TFPIP10646 304 aa12.35□□□□□ -0.43
PRKCSH-202ENST00000585540 AQP1P29972 269 aa12.35□□□□□ -0.43
PRKCSH-202ENST00000585540 KIR2DL2P43627 348 aaPredicted RBP12.35□□□□□ -0.43
PRKCSH-202ENST00000585540 KCNJ5P48544 419 aa12.35□□□□□ -0.43
PRKCSH-202ENST00000585540 MNAT1P51948 309 aa12.35□□□□□ -0.43
PRKCSH-202ENST00000585540 SLC7A2P52569 658 aa12.35□□□□□ -0.43
PRKCSH-202ENST00000585540 KRT72Q14CN4 511 aa12.35□□□□□ -0.43
PRKCSH-202ENST00000585540 MFSD13AQ14CX5 517 aa12.35□□□□□ -0.43
PRKCSH-202ENST00000585540 ABLIM2Q6H8Q1 611 aa12.35□□□□□ -0.43
PRKCSH-202ENST00000585540 PPP4R4Q6NUP7 873 aa12.35□□□□□ -0.43
PRKCSH-202ENST00000585540 SSX8Q7RTT4 187 aa12.35□□□□□ -0.43
PRKCSH-202ENST00000585540 CNEP1R1Q8N9A8 125 aa12.35□□□□□ -0.43
PRKCSH-202ENST00000585540 OR2T12Q8NG77 320 aa12.35□□□□□ -0.43
PRKCSH-202ENST00000585540 OR6S1Q8NH40 331 aa12.35□□□□□ -0.43
PRKCSH-202ENST00000585540 C3orf49Q96BT1 292 aa12.35□□□□□ -0.43
PRKCSH-202ENST00000585540 STARD4Q96DR4 205 aa12.35□□□□□ -0.43
PRKCSH-202ENST00000585540 NAA11Q9BSU3 229 aaPredicted RBP12.35□□□□□ -0.43
PRKCSH-202ENST00000585540 RBM24Q9BX46 236 aaKnown RBP12.35□□□□□ -0.43
PRKCSH-202ENST00000585540 TAPBPLQ9BX59 468 aa12.35□□□□□ -0.43
PRKCSH-202ENST00000585540 NPDC1Q9NQX5 325 aaPredicted RBP12.35□□□□□ -0.43
PRKCSH-202ENST00000585540 PLSCR4Q9NRQ2 329 aa12.35□□□□□ -0.43
PRKCSH-202ENST00000585540 EMC3Q9P0I2 261 aa12.35□□□□□ -0.43
PRKCSH-202ENST00000585540 SLC9A8Q9Y2E8 581 aa12.35□□□□□ -0.43
PRKCSH-202ENST00000585540 KIAA1549Q9HCM3 1950 aa12.34□□□□□ -0.43
PRKCSH-202ENST00000585540 HECTD1Q9ULT8 2610 aa12.34□□□□□ -0.43
PRKCSH-202ENST00000585540 IGKV3D-15A0A087WSY6 115 aa12.34□□□□□ -0.43
PRKCSH-202ENST00000585540 ELOVL7A1L3X0 281 aa12.34□□□□□ -0.43
PRKCSH-202ENST00000585540 TMEM229AB2RXF0 380 aa12.34□□□□□ -0.43
PRKCSH-202ENST00000585540 M0QX08 132 aa12.34□□□□□ -0.43
PRKCSH-202ENST00000585540 NME4O00746 187 aa12.34□□□□□ -0.43
PRKCSH-202ENST00000585540 OR2T1O43869 369 aa12.34□□□□□ -0.43
PRKCSH-202ENST00000585540 FZD7O75084 574 aa12.34□□□□□ -0.43
PRKCSH-202ENST00000585540 AQP8O94778 261 aa12.34□□□□□ -0.43
PRKCSH-202ENST00000585540 VAMP5O95183 116 aa12.34□□□□□ -0.43
PRKCSH-202ENST00000585540 GPIP06744 558 aa12.34□□□□□ -0.43
PRKCSH-202ENST00000585540 SHC1P29353 583 aa12.34□□□□□ -0.43
PRKCSH-202ENST00000585540 AGTR1P30556 359 aa12.34□□□□□ -0.43
PRKCSH-202ENST00000585540 IDUAP35475 653 aa12.34□□□□□ -0.43
PRKCSH-202ENST00000585540 SLC16A1P53985 500 aa12.34□□□□□ -0.43
PRKCSH-202ENST00000585540 PSME3P61289 254 aa12.34□□□□□ -0.43
PRKCSH-202ENST00000585540 FOXF2Q12947 444 aa12.34□□□□□ -0.43
PRKCSH-202ENST00000585540 NRF1Q16656 503 aa12.34□□□□□ -0.43
PRKCSH-202ENST00000585540 SPATS1Q496A3 300 aa12.34□□□□□ -0.43
PRKCSH-202ENST00000585540 ZNF613Q6PF04 617 aa12.34□□□□□ -0.43
PRKCSH-202ENST00000585540 ULK3Q6PHR2 472 aa12.34□□□□□ -0.43
PRKCSH-202ENST00000585540 PAQR6Q6TCH4 344 aa12.34□□□□□ -0.43
PRKCSH-202ENST00000585540 BEND4Q6ZU67 534 aa12.34□□□□□ -0.43
PRKCSH-202ENST00000585540 ATG4DQ86TL0 474 aaPredicted RBP12.34□□□□□ -0.43
PRKCSH-202ENST00000585540 SLC15A3Q8IY34 581 aa12.34□□□□□ -0.43
PRKCSH-202ENST00000585540 CADM2Q8N3J6 435 aa12.34□□□□□ -0.43
PRKCSH-202ENST00000585540 OR52E4Q8NGH9 312 aa12.34□□□□□ -0.43
PRKCSH-202ENST00000585540 FAM222BQ8WU58 562 aa12.34□□□□□ -0.43
PRKCSH-202ENST00000585540 SLC47A1Q96FL8 570 aa12.34□□□□□ -0.43
PRKCSH-202ENST00000585540 ZNF583Q96ND8 569 aa12.34□□□□□ -0.43
PRKCSH-202ENST00000585540 EPYCQ99645 322 aa12.34□□□□□ -0.43
PRKCSH-202ENST00000585540 ARHGDIGQ99819 225 aa12.34□□□□□ -0.43
PRKCSH-202ENST00000585540 SF3B5Q9BWJ5 86 aaKnown RBP12.34□□□□□ -0.43
PRKCSH-202ENST00000585540 RSPO3Q9BXY4 272 aaPredicted RBP12.34□□□□□ -0.43
PRKCSH-202ENST00000585540 SRXN1Q9BYN0 137 aa12.34□□□□□ -0.43
PRKCSH-202ENST00000585540 PCDHAC1Q9H158 963 aa12.34□□□□□ -0.43
PRKCSH-202ENST00000585540 SPAG4Q9NPE6 437 aa12.34□□□□□ -0.43
PRKCSH-202ENST00000585540 ABCD2Q9UBJ2 740 aa12.34□□□□□ -0.43
PRKCSH-202ENST00000585540 A0A1W2PNR3 127 aa12.33□□□□□ -0.44
PRKCSH-202ENST00000585540 TMEM72A0PK05 275 aa12.33□□□□□ -0.44
PRKCSH-202ENST00000585540 ELOA3DA6NLF2 546 aaPredicted RBP12.33□□□□□ -0.44
PRKCSH-202ENST00000585540 C19orf84I3L1E1 186 aa12.33□□□□□ -0.44
PRKCSH-202ENST00000585540 AHSA1O95433 338 aa12.33□□□□□ -0.44
PRKCSH-202ENST00000585540 YES1P07947 543 aa12.33□□□□□ -0.44
PRKCSH-202ENST00000585540 PPP3CBP16298 524 aa12.33□□□□□ -0.44
PRKCSH-202ENST00000585540 UQCRC1P31930 480 aa12.33□□□□□ -0.44
PRKCSH-202ENST00000585540 IFNA8P32881 189 aa12.33□□□□□ -0.44
PRKCSH-202ENST00000585540 CD79BP40259 229 aa12.33□□□□□ -0.44
PRKCSH-202ENST00000585540 SLC25A3Q00325 362 aa12.33□□□□□ -0.44
PRKCSH-202ENST00000585540 DMTNQ08495 405 aa12.33□□□□□ -0.44
PRKCSH-202ENST00000585540 MYBPHQ13203 477 aa12.33□□□□□ -0.44
PRKCSH-202ENST00000585540 ELOA3BQ3SY89 546 aa12.33□□□□□ -0.44
PRKCSH-202ENST00000585540 ALG10BQ5I7T1 473 aa12.33□□□□□ -0.44
PRKCSH-202ENST00000585540 VWA1Q6PCB0 445 aa12.33□□□□□ -0.44
PRKCSH-202ENST00000585540 TRPM8Q7Z2W7 1104 aa12.33□□□□□ -0.44
PRKCSH-202ENST00000585540 LSRQ86X29 649 aaPredicted RBP12.33□□□□□ -0.44
PRKCSH-202ENST00000585540 MICU2Q8IYU8 434 aa12.33□□□□□ -0.44
PRKCSH-202ENST00000585540 ATP6V1C2Q8NEY4 427 aa12.33□□□□□ -0.44
PRKCSH-202ENST00000585540 ELOA3Q8NG57 546 aa12.33□□□□□ -0.44
PRKCSH-202ENST00000585540 LZICQ8WZA0 190 aa12.33□□□□□ -0.44
PRKCSH-202ENST00000585540 PROX1Q92786 737 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 222.4 ms