RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 DOK1Q99704 481 aa9.49□□□□□ -0.89
LIG3-203ENST00000585370 CDCA4Q9BXL8 241 aa9.49□□□□□ -0.89
LIG3-203ENST00000585370 DEFB126Q9BYW3 111 aa9.49□□□□□ -0.89
LIG3-203ENST00000585370 NDEL1Q9GZM8 345 aa9.49□□□□□ -0.89
LIG3-203ENST00000585370 ADAM19Q9H013 955 aa9.49□□□□□ -0.89
LIG3-203ENST00000585370 FN3KQ9H479 309 aa9.49□□□□□ -0.89
LIG3-203ENST00000585370 EGLN3Q9H6Z9 239 aa9.49□□□□□ -0.89
LIG3-203ENST00000585370 ACOT13Q9NPJ3 140 aa9.49□□□□□ -0.89
LIG3-203ENST00000585370 PTTG2Q9NZH5 202 aa9.49□□□□□ -0.89
LIG3-203ENST00000585370 H2AFY2Q9P0M6 372 aaPredicted RBP9.49□□□□□ -0.89
LIG3-203ENST00000585370 AASSQ9UDR5 926 aa9.49□□□□□ -0.89
LIG3-203ENST00000585370 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.49□□□□□ -0.89
LIG3-203ENST00000585370 CARD8Q9Y2G2 431 aa9.49□□□□□ -0.89
LIG3-203ENST00000585370 PTRH2Q9Y3E5 179 aaKnown RBP9.49□□□□□ -0.89
LIG3-203ENST00000585370 SDK2Q58EX2 2172 aa9.48□□□□□ -0.89
LIG3-203ENST00000585370 NBASA2RRP1 2371 aa9.48□□□□□ -0.89
LIG3-203ENST00000585370 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.48□□□□□ -0.89
LIG3-203ENST00000585370 PRODHO43272 600 aa9.48□□□□□ -0.89
LIG3-203ENST00000585370 IDH3BO43837 385 aa9.48□□□□□ -0.89
LIG3-203ENST00000585370 PIP5K1CO60331 668 aa9.48□□□□□ -0.89
LIG3-203ENST00000585370 CDC40O60508 579 aaKnown RBP eCLIP9.48□□□□□ -0.89
LIG3-203ENST00000585370 ADAM11O75078 769 aa9.48□□□□□ -0.89
LIG3-203ENST00000585370 ENTPD6O75354 484 aa9.48□□□□□ -0.89
LIG3-203ENST00000585370 KLF7O75840 302 aaPredicted RBP9.48□□□□□ -0.89
LIG3-203ENST00000585370 STK17BO94768 372 aa9.48□□□□□ -0.89
LIG3-203ENST00000585370 IGFBP1P08833 259 aaPredicted RBP9.48□□□□□ -0.89
LIG3-203ENST00000585370 SAGP10523 405 aaPredicted RBP9.48□□□□□ -0.89
LIG3-203ENST00000585370 GP1BBP13224 206 aa9.48□□□□□ -0.89
LIG3-203ENST00000585370 MAKP20794 623 aa9.48□□□□□ -0.89
LIG3-203ENST00000585370 GSTT1P30711 240 aa9.48□□□□□ -0.89
LIG3-203ENST00000585370 SLC6A6P31641 620 aa9.48□□□□□ -0.89
LIG3-203ENST00000585370 EVI2BP34910 448 aa9.48□□□□□ -0.89
LIG3-203ENST00000585370 LSM11P83369 360 aaKnown RBP eCLIP9.48□□□□□ -0.89
LIG3-203ENST00000585370 NFATC3Q12968 1075 aa9.48□□□□□ -0.89
LIG3-203ENST00000585370 SSPNQ14714 243 aa9.48□□□□□ -0.89
LIG3-203ENST00000585370 PCOLCEQ15113 449 aa9.48□□□□□ -0.89
LIG3-203ENST00000585370 CD226Q15762 336 aa9.48□□□□□ -0.89
LIG3-203ENST00000585370 ARMC4Q5T2S8 1044 aa9.48□□□□□ -0.89
LIG3-203ENST00000585370 C5orf46Q6UWT4 87 aa9.48□□□□□ -0.89
LIG3-203ENST00000585370 APOOLQ6UXV4 268 aa9.48□□□□□ -0.89
LIG3-203ENST00000585370 ATG4DQ86TL0 474 aaPredicted RBP9.48□□□□□ -0.89
LIG3-203ENST00000585370 OAFQ86UD1 273 aa9.48□□□□□ -0.89
LIG3-203ENST00000585370 ERI1Q8IV48 349 aaKnown RBP9.48□□□□□ -0.89
LIG3-203ENST00000585370 PRR22Q8IZ63 422 aa9.48□□□□□ -0.89
LIG3-203ENST00000585370 TMCO5AQ8N6Q1 288 aa9.48□□□□□ -0.89
LIG3-203ENST00000585370 GALNT6Q8NCL4 622 aa9.48□□□□□ -0.89
LIG3-203ENST00000585370 ZNF563Q8TA94 476 aa9.48□□□□□ -0.89
LIG3-203ENST00000585370 FANK1Q8TC84 345 aa9.48□□□□□ -0.89
LIG3-203ENST00000585370 ELP5Q8TE02 316 aa9.48□□□□□ -0.89
LIG3-203ENST00000585370 RAB2BQ8WUD1 216 aa9.48□□□□□ -0.89
LIG3-203ENST00000585370 TMEM234Q8WY98 164 aa9.48□□□□□ -0.89
LIG3-203ENST00000585370 PMEPA1Q969W9 287 aa9.48□□□□□ -0.89
LIG3-203ENST00000585370 TMEM80Q96HE8 168 aa9.48□□□□□ -0.89
LIG3-203ENST00000585370 SAMD8Q96LT4 415 aa9.48□□□□□ -0.89
LIG3-203ENST00000585370 ZNF582Q96NG8 517 aaPredicted RBP9.48□□□□□ -0.89
LIG3-203ENST00000585370 LHPPQ9H008 270 aa9.48□□□□□ -0.89
LIG3-203ENST00000585370 OR52D1Q9H346 318 aa9.48□□□□□ -0.89
LIG3-203ENST00000585370 UBQLN3Q9H347 655 aa9.48□□□□□ -0.89
LIG3-203ENST00000585370 DSN1Q9H410 356 aa9.48□□□□□ -0.89
LIG3-203ENST00000585370 ZBTB20Q9HC78 741 aaPredicted RBP9.48□□□□□ -0.89
LIG3-203ENST00000585370 MMP25Q9NPA2 562 aa9.48□□□□□ -0.89
LIG3-203ENST00000585370 MEPEQ9NQ76 525 aaPredicted RBP9.48□□□□□ -0.89
LIG3-203ENST00000585370 MYOTQ9UBF9 498 aa9.48□□□□□ -0.89
LIG3-203ENST00000585370 SIGLEC7Q9Y286 467 aa9.48□□□□□ -0.89
LIG3-203ENST00000585370 ZNF337Q9Y3M9 751 aa9.48□□□□□ -0.89
LIG3-203ENST00000585370 B3GALT1Q9Y5Z6 326 aa9.48□□□□□ -0.89
LIG3-203ENST00000585370 PTPN13Q12923 2485 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 IGHV1-45A0A0A0MS14 117 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 CDC14CA4D256 554 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 CYSRT1A8MQ03 144 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 KDM4EB2RXH2 506 aaPredicted RBP9.47□□□□□ -0.89
LIG3-203ENST00000585370 CDC42EP2O14613 210 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 TP53I11O14683 189 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 SURF4O15260 269 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 HCRTR2O43614 444 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 PRKYO43930 277 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 WISP1O95388 367 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 NADKO95544 446 aaPredicted RBP9.47□□□□□ -0.89
LIG3-203ENST00000585370 DLGAP3O95886 979 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 IFNGP01579 166 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 UMODP07911 640 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 FBXO45P0C2W1 286 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 FAM87AP0C7U9 286 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 DBTP11182 482 aaKnown RBP9.47□□□□□ -0.89
LIG3-203ENST00000585370 HK1P19367 917 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 CXCR1P25024 350 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 ACVR2AP27037 513 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 CD82P27701 267 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 CCR4P51679 360 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 MAP2K6P52564 334 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 PRPS1P60891 318 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 RPS15P62841 145 aaKnown RBP9.47□□□□□ -0.89
LIG3-203ENST00000585370 PIGFQ07326 219 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 CRYZQ08257 329 aaKnown RBP9.47□□□□□ -0.89
LIG3-203ENST00000585370 RAB40BQ12829 278 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 IRF3Q14653 427 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 TBR1Q16650 682 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 SYT14P1Q58G82 188 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 FAM199XQ6PEV8 388 aaPredicted RBP9.47□□□□□ -0.89
LIG3-203ENST00000585370 OPN5Q6U736 354 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms