RNA–Protein interactions for RNA: ENST00000584992.1

RIOK3-211, Transcript of RIO kinase 3, human

TSL 3

Gene RIOK3, Length 396 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RIOK3-211	ENST00000584992	OR2T34	Q8NGX1	318 aa		2.58	□□□□□ -2
RIOK3-211	ENST00000584992	BRSK1	Q8TDC3	778 aa		2.58	□□□□□ -2
RIOK3-211	ENST00000584992	HTR3C	Q8WXA8	447 aa		2.58	□□□□□ -2
RIOK3-211	ENST00000584992	SYAP1	Q96A49	352 aa	Predicted RBP	2.58	□□□□□ -2
RIOK3-211	ENST00000584992	CCNL2	Q96S94	520 aa	Predicted RBP	2.58	□□□□□ -2
RIOK3-211	ENST00000584992	RASL11B	Q9BPW5	248 aa		2.58	□□□□□ -2
RIOK3-211	ENST00000584992	ZNF670	Q9BS34	389 aa		2.58	□□□□□ -2
RIOK3-211	ENST00000584992	TUBGCP2	Q9BSJ2	902 aa		2.58	□□□□□ -2
RIOK3-211	ENST00000584992	RAB33B	Q9H082	229 aa		2.58	□□□□□ -2
RIOK3-211	ENST00000584992	RNF14	Q9UBS8	474 aa		2.58	□□□□□ -2
RIOK3-211	ENST00000584992	PCSK1N	Q9UHG2	260 aa		2.58	□□□□□ -2
RIOK3-211	ENST00000584992	ZNF225	Q9UK10	706 aa		2.58	□□□□□ -2
RIOK3-211	ENST00000584992	PRPF19	Q9UMS4	504 aa	Known RBP	2.58	□□□□□ -2
RIOK3-211	ENST00000584992	RPH3AL	Q9UNE2	315 aa		2.58	□□□□□ -2
RIOK3-211	ENST00000584992	NEUROG3	Q9Y4Z2	214 aa		2.58	□□□□□ -2
RIOK3-211	ENST00000584992	SLCO1B1	Q9Y6L6	691 aa		2.58	□□□□□ -2
RIOK3-211	ENST00000584992	PLEKHH1	Q9ULM0	1364 aa		2.58	□□□□□ -2
RIOK3-211	ENST00000584992	IGKV1D-8	A0A087WSZ0	117 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992		A6NDX4	124 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992	DCTN6	O00399	190 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992	MBTPS2	O43462	519 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992	HCRTR1	O43613	425 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992	STAMBP	O95630	424 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992	GUCA1C	O95843	209 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992	GIP	P09681	153 aa	Predicted RBP	2.57	□□□□□ -2
RIOK3-211	ENST00000584992	ZNF853	P0CG23	659 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992	TOP1	P11387	765 aa	Known RBP	2.57	□□□□□ -2
RIOK3-211	ENST00000584992	IMPDH1	P20839	514 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992	MMP11	P24347	488 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992	PSMA5	P28066	241 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992	PTGDS	P41222	190 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992	RPS10	P46783	165 aa	Known RBP	2.57	□□□□□ -2
RIOK3-211	ENST00000584992	TDO2	P48775	406 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992	TAS2R19	P59542	299 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992	RPS14	P62263	151 aa	Known RBP	2.57	□□□□□ -2
RIOK3-211	ENST00000584992	CBX1	P83916	185 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992	EIF4EBP2	Q13542	120 aa	Predicted RBP	2.57	□□□□□ -2
RIOK3-211	ENST00000584992	TTC23	Q5W5X9	447 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992	CYB5R2	Q6BCY4	276 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992	TMIGD1	Q6UXZ0	262 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992	CCDC80	Q76M96	950 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992	GDPD3	Q7L5L3	318 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992	ZNF571	Q7Z3V5	609 aa	Predicted RBP	2.57	□□□□□ -2
RIOK3-211	ENST00000584992	CCDC65	Q8IXS2	484 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992	OR2L13	Q8N349	312 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992		Q8N9L7	120 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992	NKAPP1	Q8N9T2	125 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992		Q8N9W7	124 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992	CATSPER1	Q8NEC5	780 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992	OR51S1	Q8NGJ8	323 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992	OR4D5	Q8NGN0	318 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992	PIGC	Q92535	297 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992	IL22RA2	Q969J5	263 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992	SENP8	Q96LD8	212 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992	TTC25	Q96NG3	672 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992	KCNA7	Q96RP8	456 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992	HIST1H4G	Q99525	98 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992	NAT9	Q9BTE0	207 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	2.57	□□□□□ -2
RIOK3-211	ENST00000584992	SELENOI	Q9C0D9	397 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992	FOLH1B	Q9HBA9	442 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992	RAB18	Q9NP72	206 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992	CGN	Q9P2M7	1197 aa	Known RBP	2.57	□□□□□ -2
RIOK3-211	ENST00000584992	SH3BGRL2	Q9UJC5	107 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992	ISY1	Q9ULR0	285 aa	Known RBP	2.57	□□□□□ -2
RIOK3-211	ENST00000584992	STAP1	Q9ULZ2	295 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992	MRPS33	Q9Y291	106 aa	Known RBP	2.57	□□□□□ -2
RIOK3-211	ENST00000584992	PRG3	Q9Y2Y8	225 aa	Predicted RBP	2.57	□□□□□ -2
RIOK3-211	ENST00000584992	SH3TC1	Q8TE82	1336 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992	KIF16B	Q96L93	1317 aa		2.57	□□□□□ -2
RIOK3-211	ENST00000584992	IGHV1OR21-1	A0A087WYE8	117 aa		2.56	□□□□□ -2
RIOK3-211	ENST00000584992	ANGPT2	O15123	496 aa		2.56	□□□□□ -2
RIOK3-211	ENST00000584992	RGS16	O15492	202 aa	Predicted RBP	2.56	□□□□□ -2
RIOK3-211	ENST00000584992	PFKFB2	O60825	505 aa		2.56	□□□□□ -2
RIOK3-211	ENST00000584992	OPN1MW	P04001	364 aa		2.56	□□□□□ -2
RIOK3-211	ENST00000584992	OPN1MW2	P0DN77	364 aa		2.56	□□□□□ -2
RIOK3-211	ENST00000584992	OPN1MW3	P0DN78	364 aa		2.56	□□□□□ -2
RIOK3-211	ENST00000584992	PNMT	P11086	282 aa		2.56	□□□□□ -2
RIOK3-211	ENST00000584992	COX5A	P20674	150 aa		2.56	□□□□□ -2
RIOK3-211	ENST00000584992	CXCR2	P25025	360 aa		2.56	□□□□□ -2
RIOK3-211	ENST00000584992	GCA	P28676	217 aa		2.56	□□□□□ -2
RIOK3-211	ENST00000584992	CALCR	P30988	508 aa		2.56	□□□□□ -2
RIOK3-211	ENST00000584992	RDX	P35241	583 aa	Known RBP	2.56	□□□□□ -2
RIOK3-211	ENST00000584992	PPT1	P50897	306 aa		2.56	□□□□□ -2
RIOK3-211	ENST00000584992	KPNA2	P52292	529 aa	Known RBP	2.56	□□□□□ -2
RIOK3-211	ENST00000584992	PKNOX1	P55347	436 aa		2.56	□□□□□ -2
RIOK3-211	ENST00000584992	SH3BGR	P55822	239 aa	Predicted RBP	2.56	□□□□□ -2
RIOK3-211	ENST00000584992	MAP2K1	Q02750	393 aa	Predicted RBP	2.56	□□□□□ -2
RIOK3-211	ENST00000584992	MESD	Q14696	234 aa		2.56	□□□□□ -2
RIOK3-211	ENST00000584992	NRF1	Q16656	503 aa		2.56	□□□□□ -2
RIOK3-211	ENST00000584992	KRTAP13-3	Q3SY46	172 aa		2.56	□□□□□ -2
RIOK3-211	ENST00000584992	BCL7A	Q4VC05	210 aa		2.56	□□□□□ -2
RIOK3-211	ENST00000584992	C1orf100	Q5SVJ3	147 aa		2.56	□□□□□ -2
RIOK3-211	ENST00000584992	BEND3	Q5T5X7	828 aa		2.56	□□□□□ -2
RIOK3-211	ENST00000584992	TIGD3	Q6B0B8	471 aa		2.56	□□□□□ -2
RIOK3-211	ENST00000584992	C11orf71	Q6IPW1	123 aa		2.56	□□□□□ -2
RIOK3-211	ENST00000584992	SLC25A24	Q6NUK1	477 aa		2.56	□□□□□ -2
RIOK3-211	ENST00000584992		Q6P435	159 aa		2.56	□□□□□ -2
RIOK3-211	ENST00000584992	RFLNA	Q6ZTI6	216 aa		2.56	□□□□□ -2
RIOK3-211	ENST00000584992	RDH10	Q8IZV5	341 aa		2.56	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms