RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 OR4D9Q8NGE8 314 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 RPLP0P6Q8NHW5 317 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 SLC22A8Q8TCC7 542 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 ASZ1Q8WWH4 475 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 BPIFA2Q96DR5 249 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 C16orf58Q96GQ5 468 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 ADGRG7Q96K78 797 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 RBM14Q96PK6 669 aaKnown RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 TBL1YQ9BQ87 522 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 TDRD1Q9BXT4 1180 aaKnown RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 WWP1Q9H0M0 922 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 PPIL3Q9H2H8 161 aaKnown RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 RMND5AQ9H871 391 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 PELI2Q9HAT8 420 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 MLXIPLQ9NP71 852 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 MMP25Q9NPA2 562 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 ETNK2Q9NVF9 386 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 FBXL12Q9NXK8 326 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 AHSPQ9NZD4 102 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 OR6C2Q9NZP2 312 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 LHX3Q9UBR4 397 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 RSPH14Q9UHP6 348 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 CFL2Q9Y281 166 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 OR2W1Q9Y3N9 320 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 SAR1BQ9Y6B6 198 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 IGLV3-16A0A075B6K0 115 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 TRBV5-4A0A0C4DH59 114 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 A0A1W2PPQ1 181 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 A0A1W2PQ72 361 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 OR2M5A3KFT3 312 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 SLCO1B7G3V0H7 640 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 TNFRSF13BO14836 293 aaPredicted RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 NVLO15381 856 aaKnown RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 LDB2O43679 373 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 KIAA0513O60268 411 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 NME6O75414 186 aaPredicted RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 CLDN14O95500 239 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 F7P08709 466 aaPredicted RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 RBP1P09455 135 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 ZSCAN5DPP0CG00 497 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 GABRG2P18507 467 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 MSH3P20585 1137 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 GIFP27352 417 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 CDKN2BP42772 138 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 CDX1P47902 265 aaPredicted RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 HTR6P50406 440 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 EIF3EP60228 445 aaKnown RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 CEACAM7Q14002 265 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 LY6DQ14210 128 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 SQLEQ14534 574 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 TRIP10Q15642 601 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 TCHHL1Q5QJ38 904 aaPredicted RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 GRTP1Q5TC63 336 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 NKAIN2Q5VXU1 208 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 RWDD4Q6NW29 188 aaKnown RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 DLEU7Q6UYE1 221 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 KDM7AQ6ZMT4 941 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 NUDT13Q86X67 352 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 SLC22A9Q8IVM8 553 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 C10orf67Q8IYJ2 551 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 TMEM156Q8N614 296 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 OR56A4Q8NGH8 313 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 OR13J1Q8NGT2 312 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 AKR7LQ8NHP1 331 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 UBA3Q8TBC4 463 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 LRRC15Q8TF66 581 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 OR1E3Q8WZA6 343 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 FGF14Q92915 247 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 GLYATL1Q969I3 302 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 RAD51AP1Q96B01 352 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 RHBDF1Q96CC6 855 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 MOCOSQ96EN8 888 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 SNF8Q96H20 258 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 COX14Q96I36 57 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 PSMB7Q99436 277 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 EDEM2Q9BV94 578 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 KIFC1Q9BW19 673 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 SIRPDQ9H106 197 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 DPEP3Q9H4B8 488 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 TRIM45Q9H8W5 580 aaPredicted RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 VIPAS39Q9H9C1 493 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 NMUR1Q9HB89 426 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 DNAJC4Q9NNZ3 241 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 TCF7L2Q9NQB0 619 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 THUMPD1Q9NXG2 353 aaKnown RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 MS4A12Q9NXJ0 267 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 KLHL9Q9P2J3 617 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 TMED5Q9Y3A6 229 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 ALG6Q9Y672 507 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 TRIP11Q15643 1979 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 SPTY2D1-AS1A0A0U1RR47 76 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 C2orf74A8MZ97 194 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 H7C0C1 242 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 TRAFD1O14545 582 aaPredicted RBP1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 RFPL2O75678 378 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 GAGE7O76087 117 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 RAF1P04049 648 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 DCNP07585 359 aaKnown RBP1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 GAGE12FP0CL80 117 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 GAGE12GP0CL81 117 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms