RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 HNRNPCL2B2RXH8 293 aa13.94□□□□□ -0.18
SKA2-209ENST00000583976 HNRNPCL3B7ZW38 293 aa13.94□□□□□ -0.18
SKA2-209ENST00000583976 HNRNPCL1O60812 293 aaKnown RBP13.94□□□□□ -0.18
SKA2-209ENST00000583976 PGM3O95394 542 aa13.94□□□□□ -0.18
SKA2-209ENST00000583976 NTN1O95631 604 aa13.94□□□□□ -0.18
SKA2-209ENST00000583976 CSTAP01040 98 aa13.94□□□□□ -0.18
SKA2-209ENST00000583976 UBTFL6P0CB48 400 aaPredicted RBP13.94□□□□□ -0.18
SKA2-209ENST00000583976 HNRNPCL4P0DMR1 293 aa13.94□□□□□ -0.18
SKA2-209ENST00000583976 UBL4AP11441 157 aa13.94□□□□□ -0.18
SKA2-209ENST00000583976 IL7RP16871 459 aa13.94□□□□□ -0.18
SKA2-209ENST00000583976 SLC6A2P23975 617 aa13.94□□□□□ -0.18
SKA2-209ENST00000583976 AQP1P29972 269 aa13.94□□□□□ -0.18
SKA2-209ENST00000583976 AGTR1P30556 359 aa13.94□□□□□ -0.18
SKA2-209ENST00000583976 CTBP2P56545 445 aa13.94□□□□□ -0.18
SKA2-209ENST00000583976 FOXF1Q12946 379 aa13.94□□□□□ -0.18
SKA2-209ENST00000583976 SCARB2Q14108 478 aa13.94□□□□□ -0.18
SKA2-209ENST00000583976 TSC22D1Q15714 1073 aa13.94□□□□□ -0.18
SKA2-209ENST00000583976 GLYR1Q49A26 553 aaPredicted RBP13.94□□□□□ -0.18
SKA2-209ENST00000583976 PLEKHM3Q6ZWE6 761 aa13.94□□□□□ -0.18
SKA2-209ENST00000583976 MTERF4Q7Z6M4 381 aaKnown RBP13.94□□□□□ -0.18
SKA2-209ENST00000583976 VRK2Q86Y07 508 aa13.94□□□□□ -0.18
SKA2-209ENST00000583976 PTOV1Q86YD1 416 aa13.94□□□□□ -0.18
SKA2-209ENST00000583976 PEX5LQ8IYB4 626 aa13.94□□□□□ -0.18
SKA2-209ENST00000583976 GTPBP8Q8N3Z3 284 aaPredicted RBP13.94□□□□□ -0.18
SKA2-209ENST00000583976 TMCO5AQ8N6Q1 288 aa13.94□□□□□ -0.18
SKA2-209ENST00000583976 MAPK1IP1LQ8NDC0 245 aa13.94□□□□□ -0.18
SKA2-209ENST00000583976 OR2V1Q8NHB1 315 aa13.94□□□□□ -0.18
SKA2-209ENST00000583976 B4GALNT2Q8NHY0 566 aa13.94□□□□□ -0.18
SKA2-209ENST00000583976 POC1BQ8TC44 478 aa13.94□□□□□ -0.18
SKA2-209ENST00000583976 GMPPAQ96IJ6 420 aaPredicted RBP13.94□□□□□ -0.18
SKA2-209ENST00000583976 TMEM38AQ9H6F2 299 aa13.94□□□□□ -0.18
SKA2-209ENST00000583976 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.94□□□□□ -0.18
SKA2-209ENST00000583976 USP22Q9UPT9 525 aa13.94□□□□□ -0.18
SKA2-209ENST00000583976 ATRQ13535 2644 aa13.94□□□□□ -0.18
SKA2-209ENST00000583976 CR1P17927 2039 aa13.93□□□□□ -0.18
SKA2-209ENST00000583976 A0A0J9YW62 118 aa13.93□□□□□ -0.18
SKA2-209ENST00000583976 CCT8L1PA6NM43 557 aa13.93□□□□□ -0.18
SKA2-209ENST00000583976 ZNF264O43296 627 aa13.93□□□□□ -0.18
SKA2-209ENST00000583976 BCAS1O75363 584 aaPredicted RBP13.93□□□□□ -0.18
SKA2-209ENST00000583976 NUDT14O95848 222 aa13.93□□□□□ -0.18
SKA2-209ENST00000583976 DBIP07108 87 aaKnown RBP13.93□□□□□ -0.18
SKA2-209ENST00000583976 SFTPDP35247 375 aa13.93□□□□□ -0.18
SKA2-209ENST00000583976 CCR4P51679 360 aa13.93□□□□□ -0.18
SKA2-209ENST00000583976 KCNJ10P78508 379 aa13.93□□□□□ -0.18
SKA2-209ENST00000583976 AP1ARQ63HQ0 302 aa13.93□□□□□ -0.18
SKA2-209ENST00000583976 REEP3Q6NUK4 255 aa13.93□□□□□ -0.18
SKA2-209ENST00000583976 EIF3MQ7L2H7 374 aaKnown RBP13.93□□□□□ -0.18
SKA2-209ENST00000583976 SERPINA11Q86U17 422 aa13.93□□□□□ -0.18
SKA2-209ENST00000583976 C11orf65Q8NCR3 313 aa13.93□□□□□ -0.18
SKA2-209ENST00000583976 OR52P1PQ8NH57 321 aa13.93□□□□□ -0.18
SKA2-209ENST00000583976 BBS10Q8TAM1 723 aa13.93□□□□□ -0.18
SKA2-209ENST00000583976 ABHD3Q8WU67 409 aa13.93□□□□□ -0.18
SKA2-209ENST00000583976 TMEM171Q8WVE6 324 aa13.93□□□□□ -0.18
SKA2-209ENST00000583976 WDR60Q8WVS4 1066 aa13.93□□□□□ -0.18
SKA2-209ENST00000583976 HOPXQ9BPY8 73 aaPredicted RBP13.93□□□□□ -0.18
SKA2-209ENST00000583976 TMEM204Q9BSN7 226 aa13.93□□□□□ -0.18
SKA2-209ENST00000583976 SRXN1Q9BYN0 137 aa13.93□□□□□ -0.18
SKA2-209ENST00000583976 PLSCR4Q9NRQ2 329 aa13.93□□□□□ -0.18
SKA2-209ENST00000583976 MCTS1Q9ULC4 181 aaKnown RBP13.93□□□□□ -0.18
SKA2-209ENST00000583976 DSPPQ9NZW4 1301 aa13.92□□□□□ -0.18
SKA2-209ENST00000583976 HS3ST1O14792 307 aa13.92□□□□□ -0.18
SKA2-209ENST00000583976 GZMMP51124 257 aa13.92□□□□□ -0.18
SKA2-209ENST00000583976 P2RX1P51575 399 aa13.92□□□□□ -0.18
SKA2-209ENST00000583976 SLC7A2P52569 658 aa13.92□□□□□ -0.18
SKA2-209ENST00000583976 ATP5J2P56134 94 aa13.92□□□□□ -0.18
SKA2-209ENST00000583976 PSME3P61289 254 aa13.92□□□□□ -0.18
SKA2-209ENST00000583976 MXRA7P84157 204 aa13.92□□□□□ -0.18
SKA2-209ENST00000583976 PPP2R2BQ00005 443 aa13.92□□□□□ -0.18
SKA2-209ENST00000583976 FAM91A1Q658Y4 838 aa13.92□□□□□ -0.18
SKA2-209ENST00000583976 NET1Q7Z628 596 aaPredicted RBP13.92□□□□□ -0.18
SKA2-209ENST00000583976 SLC15A3Q8IY34 581 aa13.92□□□□□ -0.18
SKA2-209ENST00000583976 HIPK4Q8NE63 616 aa13.92□□□□□ -0.18
SKA2-209ENST00000583976 FBXO27Q8NI29 283 aa13.92□□□□□ -0.18
SKA2-209ENST00000583976 ROBO4Q8WZ75 1007 aa13.92□□□□□ -0.18
SKA2-209ENST00000583976 AKAP1Q92667 903 aaKnown RBP eCLIP13.92□□□□□ -0.18
SKA2-209ENST00000583976 NEUROG1Q92886 237 aa13.92□□□□□ -0.18
SKA2-209ENST00000583976 S100PBPQ96BU1 408 aa13.92□□□□□ -0.18
SKA2-209ENST00000583976 CACYBPQ9HB71 228 aaKnown RBP13.92□□□□□ -0.18
SKA2-209ENST00000583976 BCL2L10Q9HD36 194 aa13.92□□□□□ -0.18
SKA2-209ENST00000583976 ZNF701Q9NV72 531 aaPredicted RBP13.92□□□□□ -0.18
SKA2-209ENST00000583976 RLIMQ9NVW2 624 aa13.92□□□□□ -0.18
SKA2-209ENST00000583976 CMTM6Q9NX76 183 aa13.92□□□□□ -0.18
SKA2-209ENST00000583976 GMPR2Q9P2T1 348 aaKnown RBP13.92□□□□□ -0.18
SKA2-209ENST00000583976 ZNF232Q9UNY5 417 aa13.92□□□□□ -0.18
SKA2-209ENST00000583976 ANGPT4Q9Y264 503 aa13.92□□□□□ -0.18
SKA2-209ENST00000583976 FREM1Q5H8C1 2179 aa13.92□□□□□ -0.18
SKA2-209ENST00000583976 COL6A5A8TX70 2615 aa13.91□□□□□ -0.18
SKA2-209ENST00000583976 A0A087WZY1 265 aa13.91□□□□□ -0.18
SKA2-209ENST00000583976 C7orf72A4D263 438 aa13.91□□□□□ -0.18
SKA2-209ENST00000583976 ADAMDEC1O15204 470 aa13.91□□□□□ -0.18
SKA2-209ENST00000583976 EIF4E2O60573 245 aaKnown RBP13.91□□□□□ -0.18
SKA2-209ENST00000583976 SYNGR4O95473 234 aa13.91□□□□□ -0.18
SKA2-209ENST00000583976 RPS4Y1P22090 263 aaKnown RBP13.91□□□□□ -0.18
SKA2-209ENST00000583976 RYKP34925 604 aa13.91□□□□□ -0.18
SKA2-209ENST00000583976 PGM1P36871 562 aa13.91□□□□□ -0.18
SKA2-209ENST00000583976 ZNF41P51814 821 aaPredicted RBP13.91□□□□□ -0.18
SKA2-209ENST00000583976 RBBP4Q09028 425 aa13.91□□□□□ -0.18
SKA2-209ENST00000583976 TNK1Q13470 666 aa13.91□□□□□ -0.18
SKA2-209ENST00000583976 KRT72Q14CN4 511 aa13.91□□□□□ -0.18
SKA2-209ENST00000583976 TOMM34Q15785 309 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms