RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 SBF1O95248 1867 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 MCM3APO60318 1980 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 IGHV4-61A0A0C4DH41 118 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 ELOVL7A1L3X0 281 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 SMIM30A4D0T7 59 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 GLTPD2A6NH11 291 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 SAGE2PA6NJ88 616 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 E9PAM4 449 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 H3BMM5 538 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 J3QR06 171 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 M0R3G1 203 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 HAS3O00219 553 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 DFFAO00273 331 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 SLC1A7O00341 560 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 E2F3O00716 465 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 B4GAT1O43505 415 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 TPST1O60507 370 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 GMNNO75496 209 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 MYO1DO94832 1006 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 GOT2P00505 430 aaKnown RBP3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 CST1P01037 141 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 IGHV4-59P01825 116 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 FGF1P05230 155 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 IL6P05231 212 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 GSTT2P0CG29 244 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 GSTT2BP0CG30 244 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 NCK1P16333 377 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 TSPAN8P19075 237 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 EFNA1P20827 205 aaPredicted RBP3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 EEF1B2P24534 225 aaKnown RBP3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 ACADLP28330 430 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 HPCAL1P37235 193 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 ETV6P41212 452 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 MAGEA2P43356 314 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 YAP1P46937 504 aaKnown RBP3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 SERPINB10P48595 397 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 GSSP48637 474 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 EIF2B2P49770 351 aaKnown RBP3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 STC1P52823 247 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 PLK1P53350 603 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 SLC35A2P78381 396 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 ZNF45Q02386 682 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 RAD51Q06609 339 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 SLC10A7Q0GE19 358 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 KRR1Q13601 381 aaKnown RBP3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 NPTX1Q15818 432 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 INAQ16352 499 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 CLPPQ16740 277 aaPredicted RBP3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 ZNF181Q2M3W8 571 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 CTU2Q2VPK5 515 aaKnown RBP3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 ADPRMQ3LIE5 342 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 FUT11Q495W5 492 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 PYCR3Q53H96 274 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 PAGE2BQ5JRK9 111 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 UBE2UQ5VVX9 321 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 SHEQ5VZ18 495 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 ZNF774Q6NX45 483 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 TMEM53Q6P2H8 277 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 TTC23LQ6PF05 361 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 PLEKHG7Q6ZR37 379 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 KCTD9Q7L273 389 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 DET1Q7L5Y6 550 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 SNX20Q7Z614 316 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 SYVN1Q86TM6 617 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 TAC4Q86UU9 113 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 IFNEQ86WN2 208 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 TIGD4Q8IY51 512 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 EID3Q8N140 333 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 CLEC4FQ8N1N0 589 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 FBXO39Q8N4B4 442 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 OR7A2PQ8NGA2 310 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 OR52K2Q8NGK3 314 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 OR10S1Q8NGN2 331 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 ST7LQ8TDW4 575 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 GTF2H4Q92759 462 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 CASP10Q92851 521 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 PYURFQ96I23 114 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 ZNF382Q96SR6 550 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 PARK7Q99497 189 aaKnown RBP3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 SEPHS2Q99611 448 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 C19orf43Q9BQ61 176 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 SLIRPQ9GZT3 109 aaKnown RBP3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 HOXD1Q9GZZ0 328 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 NACA2Q9H009 215 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 GABARAPL1Q9H0R8 117 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 ADNPQ9H2P0 1102 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 ACTL8Q9H568 366 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 ARMC7Q9H6L4 198 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 CHMP1AQ9HD42 196 aaPredicted RBP3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 CCNB1IP1Q9NPC3 277 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 MIOSQ9NXC5 875 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 SCN3BQ9NY72 215 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 TAS2R13Q9NYV9 303 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 IL37Q9NZH6 218 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 NPAP1Q9NZP6 1156 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 SUN2Q9UH99 717 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 PCTPQ9UKL6 214 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 WBP11Q9Y2W2 641 aaKnown RBP3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 NEUROG3Q9Y4Z2 214 aa3.46□□□□□ -1.86
SMCHD1-208ENST00000583344 DICER1Q9UPY3 1922 aaKnown RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms