RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 TGFBR3Q03167 851 aa3.81□□□□□ -1.8
SMARCE1-219ENST00000583294 SLC15A2Q16348 729 aa3.81□□□□□ -1.8
SMARCE1-219ENST00000583294 CCDC50Q8IVM0 306 aa3.81□□□□□ -1.8
SMARCE1-219ENST00000583294 FTMTQ8N4E7 242 aa3.81□□□□□ -1.8
SMARCE1-219ENST00000583294 DCAF4L2Q8NA75 395 aa3.81□□□□□ -1.8
SMARCE1-219ENST00000583294 HTR3CQ8WXA8 447 aa3.81□□□□□ -1.8
SMARCE1-219ENST00000583294 RPUSD4Q96CM3 377 aaKnown RBP3.81□□□□□ -1.8
SMARCE1-219ENST00000583294 AIG1Q9NVV5 245 aa3.81□□□□□ -1.8
SMARCE1-219ENST00000583294 HOXC10Q9NYD6 342 aa3.81□□□□□ -1.8
SMARCE1-219ENST00000583294 KIF25Q9UIL4 384 aa3.81□□□□□ -1.8
SMARCE1-219ENST00000583294 STAP1Q9ULZ2 295 aa3.81□□□□□ -1.8
SMARCE1-219ENST00000583294 PRPF19Q9UMS4 504 aaKnown RBP3.81□□□□□ -1.8
SMARCE1-219ENST00000583294 GPR89AB7ZAQ6 455 aa3.8□□□□□ -1.8
SMARCE1-219ENST00000583294 MBTPS2O43462 519 aa3.8□□□□□ -1.8
SMARCE1-219ENST00000583294 ATP5LO75964 103 aa3.8□□□□□ -1.8
SMARCE1-219ENST00000583294 STAMBPO95630 424 aa3.8□□□□□ -1.8
SMARCE1-219ENST00000583294 GPR89BP0CG08 455 aa3.8□□□□□ -1.8
SMARCE1-219ENST00000583294 HSMCR30P0CW71 290 aa3.8□□□□□ -1.8
SMARCE1-219ENST00000583294 ZNF44P15621 663 aa3.8□□□□□ -1.8
SMARCE1-219ENST00000583294 COX5AP20674 150 aa3.8□□□□□ -1.8
SMARCE1-219ENST00000583294 PRPHP41219 470 aa3.8□□□□□ -1.8
SMARCE1-219ENST00000583294 PTGDSP41222 190 aa3.8□□□□□ -1.8
SMARCE1-219ENST00000583294 HLCSP50747 726 aa3.8□□□□□ -1.8
SMARCE1-219ENST00000583294 PKNOX1P55347 436 aa3.8□□□□□ -1.8
SMARCE1-219ENST00000583294 WNT4P56705 351 aa3.8□□□□□ -1.8
SMARCE1-219ENST00000583294 CKAP4Q07065 602 aaKnown RBP3.8□□□□□ -1.8
SMARCE1-219ENST00000583294 ARFRP1Q13795 201 aa3.8□□□□□ -1.8
SMARCE1-219ENST00000583294 GRB7Q14451 532 aa3.8□□□□□ -1.8
SMARCE1-219ENST00000583294 KLF17Q5JT82 389 aaPredicted RBP3.8□□□□□ -1.8
SMARCE1-219ENST00000583294 PAGE3Q5JUK9 113 aa3.8□□□□□ -1.8
SMARCE1-219ENST00000583294 C1orf146Q5VVC0 180 aa3.8□□□□□ -1.8
SMARCE1-219ENST00000583294 CCDC71LQ8N9Z2 235 aa3.8□□□□□ -1.8
SMARCE1-219ENST00000583294 OR52M1Q8NGK5 317 aa3.8□□□□□ -1.8
SMARCE1-219ENST00000583294 TMEM101Q96IK0 257 aa3.8□□□□□ -1.8
SMARCE1-219ENST00000583294 TSG101Q99816 390 aa3.8□□□□□ -1.8
SMARCE1-219ENST00000583294 SMPD3Q9NY59 655 aaPredicted RBP3.8□□□□□ -1.8
SMARCE1-219ENST00000583294 COPS3Q9UNS2 423 aa3.8□□□□□ -1.8
SMARCE1-219ENST00000583294 TRAF3IP3Q9Y228 551 aa3.8□□□□□ -1.8
SMARCE1-219ENST00000583294 POLDIP2Q9Y2S7 368 aa3.8□□□□□ -1.8
SMARCE1-219ENST00000583294 DDX49Q9Y6V7 483 aaKnown RBP3.8□□□□□ -1.8
SMARCE1-219ENST00000583294 V9GY05 133 aa3.8□□□□□ -1.8
SMARCE1-219ENST00000583294 PLEKHG1Q9ULL1 1385 aa3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 C15orf38-AP3S2A0A0A6YYH1 394 aa3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 A6NIZ1 184 aa3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 IDSB3KWA1 339 aa3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 F5H6K3 240 aa3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 PANO1I0J062 215 aa3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 POLR2DO15514 142 aaKnown RBP3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 ZNF861PO60384 105 aa3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 SNNO75324 88 aaPredicted RBP3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 DIRAS1O95057 198 aa3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 AP2A1O95782 977 aa3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 IGHG4P01861 327 aa3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 NCK1P16333 377 aa3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 COX7A1P24310 79 aa3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 CALCRP30988 508 aa3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 SHMT2P34897 504 aa3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 MAP3K8P41279 467 aa3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 KLK7P49862 253 aa3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 HNMTP50135 292 aa3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 ARFIP1P53367 373 aa3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 PRPS1P60891 318 aa3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 RAP1BP61224 184 aa3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 SELENOTP62341 195 aa3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 KLRC3Q07444 240 aa3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 RIPK1Q13546 671 aa3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 NSDHLQ15738 373 aa3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 DMRTC1Q5HYR2 192 aa3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 ZSCAN25Q6NSZ9 544 aa3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 PMF1Q6P1K2 205 aa3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 ZNF571Q7Z3V5 609 aaPredicted RBP3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 C20orf203Q8NBC4 194 aa3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 STEAP2Q8NFT2 490 aa3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 OR4K14Q8NGD5 310 aa3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 DNAJA4Q8WW22 397 aaPredicted RBP3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 FAM151AQ8WW52 585 aa3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 EFHD2Q96C19 240 aaPredicted RBP3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 SEC22AQ96IW7 307 aa3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 NAT9Q9BTE0 207 aa3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 NANOGQ9H9S0 305 aa3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 FOLH1BQ9HBA9 442 aa3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 SMOXQ9NWM0 555 aa3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 SLCO1B1Q9Y6L6 691 aa3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 CDH10Q9Y6N8 788 aa3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 RLFQ13129 1914 aa3.79□□□□□ -1.8
SMARCE1-219ENST00000583294 PTCH1Q13635 1447 aa3.78□□□□□ -1.8
SMARCE1-219ENST00000583294 IGHV3OR16-13A0A075B7E8 117 aa3.78□□□□□ -1.8
SMARCE1-219ENST00000583294 PSMB11A5LHX3 300 aa3.78□□□□□ -1.8
SMARCE1-219ENST00000583294 A8MUA0 341 aa3.78□□□□□ -1.8
SMARCE1-219ENST00000583294 P04436 131 aa3.78□□□□□ -1.8
SMARCE1-219ENST00000583294 GLRA2P23416 452 aa3.78□□□□□ -1.8
SMARCE1-219ENST00000583294 RPL13AP40429 203 aaKnown RBP3.78□□□□□ -1.8
SMARCE1-219ENST00000583294 BCL7AQ4VC05 210 aa3.78□□□□□ -1.8
SMARCE1-219ENST00000583294 BRSK1Q8TDC3 778 aa3.78□□□□□ -1.8
SMARCE1-219ENST00000583294 ELSPBP1Q96BH3 223 aa3.78□□□□□ -1.8
SMARCE1-219ENST00000583294 RBM14Q96PK6 669 aaKnown RBP3.78□□□□□ -1.8
SMARCE1-219ENST00000583294 NPAS2Q99743 824 aa3.78□□□□□ -1.8
SMARCE1-219ENST00000583294 RAB34Q9BZG1 259 aa3.78□□□□□ -1.8
SMARCE1-219ENST00000583294 VCX2Q9H322 139 aa3.78□□□□□ -1.8
SMARCE1-219ENST00000583294 RBKSQ9H477 322 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms