RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 RNF103-CHMP3A0A140T963 221 aa14.1□□□□□ -0.15
SREBF1-221ENST00000583080 NDUFS8O00217 210 aa14.1□□□□□ -0.15
SREBF1-221ENST00000583080 DNPH1O43598 174 aa14.1□□□□□ -0.15
SREBF1-221ENST00000583080 LYPLA1O75608 230 aaPredicted RBP14.1□□□□□ -0.15
SREBF1-221ENST00000583080 AK1P00568 194 aa14.1□□□□□ -0.15
SREBF1-221ENST00000583080 TGFAP01135 160 aa14.1□□□□□ -0.15
SREBF1-221ENST00000583080 FGF4P08620 206 aa14.1□□□□□ -0.15
SREBF1-221ENST00000583080 KRT4P19013 534 aa14.1□□□□□ -0.15
SREBF1-221ENST00000583080 HNF1AP20823 631 aa14.1□□□□□ -0.15
SREBF1-221ENST00000583080 ARRB2P32121 409 aa14.1□□□□□ -0.15
SREBF1-221ENST00000583080 MAGEA8P43361 318 aa14.1□□□□□ -0.15
SREBF1-221ENST00000583080 H3F3AP84243 136 aa14.1□□□□□ -0.15
SREBF1-221ENST00000583080 FUT5Q11128 374 aa14.1□□□□□ -0.15
SREBF1-221ENST00000583080 CR1LQ2VPA4 569 aa14.1□□□□□ -0.15
SREBF1-221ENST00000583080 ATP6AP1LQ52LC2 224 aa14.1□□□□□ -0.15
SREBF1-221ENST00000583080 HIKESHIQ53FT3 197 aa14.1□□□□□ -0.15
SREBF1-221ENST00000583080 C6orf136Q5SQH8 315 aa14.1□□□□□ -0.15
SREBF1-221ENST00000583080 TYW3Q6IPR3 259 aaKnown RBP14.1□□□□□ -0.15
SREBF1-221ENST00000583080 C16orf62Q7Z3J2 963 aa14.1□□□□□ -0.15
SREBF1-221ENST00000583080 GRINAQ7Z429 371 aa14.1□□□□□ -0.15
SREBF1-221ENST00000583080 FNDC5Q8NAU1 212 aa14.1□□□□□ -0.15
SREBF1-221ENST00000583080 EPS8L3Q8TE67 593 aaKnown RBP14.1□□□□□ -0.15
SREBF1-221ENST00000583080 MECRQ9BV79 373 aa14.1□□□□□ -0.15
SREBF1-221ENST00000583080 BPESC1Q9GZL8 116 aa14.1□□□□□ -0.15
SREBF1-221ENST00000583080 OR51I1Q9H343 314 aa14.1□□□□□ -0.15
SREBF1-221ENST00000583080 UPB1Q9UBR1 384 aa14.1□□□□□ -0.15
SREBF1-221ENST00000583080 SLC9A8Q9Y2E8 581 aa14.1□□□□□ -0.15
SREBF1-221ENST00000583080 CLDN24A6NM45 220 aa14.09□□□□□ -0.15
SREBF1-221ENST00000583080 AP3D1O14617 1153 aa14.09□□□□□ -0.15
SREBF1-221ENST00000583080 KLF11O14901 512 aa14.09□□□□□ -0.15
SREBF1-221ENST00000583080 ANKRD28O15084 1053 aa14.09□□□□□ -0.15
SREBF1-221ENST00000583080 SKAP2O75563 359 aaPredicted RBP14.09□□□□□ -0.15
SREBF1-221ENST00000583080 SLU7O95391 586 aaKnown RBP14.09□□□□□ -0.15
SREBF1-221ENST00000583080 IMPDH2P12268 514 aa14.09□□□□□ -0.15
SREBF1-221ENST00000583080 ALDH3A1P30838 453 aa14.09□□□□□ -0.15
SREBF1-221ENST00000583080 SNRPD2P62316 118 aaKnown RBP14.09□□□□□ -0.15
SREBF1-221ENST00000583080 IQCCQ4KMZ1 466 aa14.09□□□□□ -0.15
SREBF1-221ENST00000583080 BHLHB9Q6PI77 547 aa14.09□□□□□ -0.15
SREBF1-221ENST00000583080 ZCCHC23Q6ZST2 131 aa14.09□□□□□ -0.15
SREBF1-221ENST00000583080 IFT20Q8IY31 132 aa14.09□□□□□ -0.15
SREBF1-221ENST00000583080 NATD1Q8N6N6 113 aa14.09□□□□□ -0.15
SREBF1-221ENST00000583080 ZG16BQ96DA0 208 aa14.09□□□□□ -0.15
SREBF1-221ENST00000583080 TMEM181Q9P2C4 612 aa14.09□□□□□ -0.15
SREBF1-221ENST00000583080 MID2Q9UJV3 735 aa14.09□□□□□ -0.15
SREBF1-221ENST00000583080 SLC35A3Q9Y2D2 325 aa14.09□□□□□ -0.15
SREBF1-221ENST00000583080 IGHV1-18A0A0C4DH31 117 aa14.08□□□□□ -0.16
SREBF1-221ENST00000583080 LOC390937A0A1W2PQ73 354 aa14.08□□□□□ -0.16
SREBF1-221ENST00000583080 TMEM72A0PK05 275 aa14.08□□□□□ -0.16
SREBF1-221ENST00000583080 LRP5LA4QPB2 252 aa14.08□□□□□ -0.16
SREBF1-221ENST00000583080 DUXAA6NLW8 204 aa14.08□□□□□ -0.16
SREBF1-221ENST00000583080 NPHS1O60500 1241 aa14.08□□□□□ -0.16
SREBF1-221ENST00000583080 PGRP06401 933 aa14.08□□□□□ -0.16
SREBF1-221ENST00000583080 OR12D1P0DN82 309 aa14.08□□□□□ -0.16
SREBF1-221ENST00000583080 G6PDP11413 515 aa14.08□□□□□ -0.16
SREBF1-221ENST00000583080 ZNF23P17027 643 aa14.08□□□□□ -0.16
SREBF1-221ENST00000583080 CDH2P19022 906 aaPredicted RBP14.08□□□□□ -0.16
SREBF1-221ENST00000583080 PRPS1L1P21108 318 aa14.08□□□□□ -0.16
SREBF1-221ENST00000583080 PRPS1P60891 318 aa14.08□□□□□ -0.16
SREBF1-221ENST00000583080 SQLEQ14534 574 aa14.08□□□□□ -0.16
SREBF1-221ENST00000583080 PGS1Q32NB8 556 aa14.08□□□□□ -0.16
SREBF1-221ENST00000583080 OR4F3Q6IEY1 312 aa14.08□□□□□ -0.16
SREBF1-221ENST00000583080 TNFAIP8L2Q6P589 184 aaPredicted RBP14.08□□□□□ -0.16
SREBF1-221ENST00000583080 FRRS1Q6ZNA5 592 aa14.08□□□□□ -0.16
SREBF1-221ENST00000583080 SLC46A3Q7Z3Q1 461 aa14.08□□□□□ -0.16
SREBF1-221ENST00000583080 CNPY4Q8N129 248 aa14.08□□□□□ -0.16
SREBF1-221ENST00000583080 RAB8BQ92930 207 aa14.08□□□□□ -0.16
SREBF1-221ENST00000583080 PRPF18Q99633 342 aaKnown RBP14.08□□□□□ -0.16
SREBF1-221ENST00000583080 VRK1Q99986 396 aaPredicted RBP14.08□□□□□ -0.16
SREBF1-221ENST00000583080 WDR45Q9Y484 360 aa14.08□□□□□ -0.16
SREBF1-221ENST00000583080 TMED7-TICAM2A0A0A6YYA0 188 aa14.07□□□□□ -0.16
SREBF1-221ENST00000583080 ZC3H12DA2A288 527 aaKnown RBP14.07□□□□□ -0.16
SREBF1-221ENST00000583080 ITGA2P17301 1181 aa14.07□□□□□ -0.16
SREBF1-221ENST00000583080 MPGP29372 298 aa14.07□□□□□ -0.16
SREBF1-221ENST00000583080 IL2RGP31785 369 aa14.07□□□□□ -0.16
SREBF1-221ENST00000583080 IDH2P48735 452 aaKnown RBP14.07□□□□□ -0.16
SREBF1-221ENST00000583080 SLC35A1P78382 337 aa14.07□□□□□ -0.16
SREBF1-221ENST00000583080 TGFBR3Q03167 851 aa14.07□□□□□ -0.16
SREBF1-221ENST00000583080 SLC17A1Q14916 467 aa14.07□□□□□ -0.16
SREBF1-221ENST00000583080 LIPNQ5VXI9 398 aa14.07□□□□□ -0.16
SREBF1-221ENST00000583080 KLHL24Q6TFL4 600 aa14.07□□□□□ -0.16
SREBF1-221ENST00000583080 SPATA19Q7Z5L4 167 aa14.07□□□□□ -0.16
SREBF1-221ENST00000583080 MIPOL1Q8TD10 442 aa14.07□□□□□ -0.16
SREBF1-221ENST00000583080 CNOT9Q92600 299 aaKnown RBP14.07□□□□□ -0.16
SREBF1-221ENST00000583080 ZNF385AQ96PM9 386 aaKnown RBP14.07□□□□□ -0.16
SREBF1-221ENST00000583080 CA10Q9NS85 328 aa14.07□□□□□ -0.16
SREBF1-221ENST00000583080 EXD2Q9NVH0 621 aa14.07□□□□□ -0.16
SREBF1-221ENST00000583080 TRAPPC4Q9Y296 219 aa14.07□□□□□ -0.16
SREBF1-221ENST00000583080 TMED7Q9Y3B3 224 aa14.07□□□□□ -0.16
SREBF1-221ENST00000583080 PRAMEF27A3QJZ7 478 aa14.06□□□□□ -0.16
SREBF1-221ENST00000583080 WIPF1O43516 503 aa14.06□□□□□ -0.16
SREBF1-221ENST00000583080 WNT11O96014 354 aa14.06□□□□□ -0.16
SREBF1-221ENST00000583080 C1QCP02747 245 aa14.06□□□□□ -0.16
SREBF1-221ENST00000583080 SERPINF1P36955 418 aa14.06□□□□□ -0.16
SREBF1-221ENST00000583080 CLK1P49759 484 aaKnown RBP14.06□□□□□ -0.16
SREBF1-221ENST00000583080 KCNJ10P78508 379 aa14.06□□□□□ -0.16
SREBF1-221ENST00000583080 LGALS3BPQ08380 585 aa14.06□□□□□ -0.16
SREBF1-221ENST00000583080 ADIPOQQ15848 244 aa14.06□□□□□ -0.16
SREBF1-221ENST00000583080 VHLLQ6RSH7 139 aa14.06□□□□□ -0.16
SREBF1-221ENST00000583080 ANKRD46Q86W74 232 aa14.06□□□□□ -0.16
SREBF1-221ENST00000583080 ARFGAP2Q8N6H7 521 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms