RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 HSPA12BQ96MM6 686 aa12.58□□□□□ -0.4
SRSF1-205ENST00000582730 ERMAPQ96PL5 475 aaPredicted RBP12.58□□□□□ -0.4
SRSF1-205ENST00000582730 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.58□□□□□ -0.4
SRSF1-205ENST00000582730 TTYH1Q9H313 450 aaPredicted RBP12.58□□□□□ -0.4
SRSF1-205ENST00000582730 NIPAL2Q9H841 368 aa12.58□□□□□ -0.4
SRSF1-205ENST00000582730 ISYNA1Q9NPH2 558 aa12.58□□□□□ -0.4
SRSF1-205ENST00000582730 CMC2Q9NRP2 79 aa12.58□□□□□ -0.4
SRSF1-205ENST00000582730 HSPB11Q9Y547 144 aa12.58□□□□□ -0.4
SRSF1-205ENST00000582730 C10orf142B7Z368 130 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 HPGDP15428 266 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 RPL4P36578 427 aaKnown RBP12.57□□□□□ -0.4
SRSF1-205ENST00000582730 ARL4DP49703 201 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 TIGD3Q6B0B8 471 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 TTLL10Q6ZVT0 673 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 PRSS58Q8IYP2 241 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 OR52N1Q8NH53 320 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 AP3S1Q92572 193 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 PTP4A1Q93096 173 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 NARFLQ9H6Q4 476 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 CLCA3PQ9Y6N3 262 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 SPEGQ15772 3267 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 CHURC1-FNTBB4DL54 471 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 DVL2O14641 736 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 FNTBP49356 437 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 CDONQ4KMG0 1287 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 ESCO2Q56NI9 601 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 ZNF767PQ75MW2 155 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 ZNF550Q7Z398 422 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 IQCF2Q8IXL9 164 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 BCORP1Q8N888 145 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 ZNF485Q8NCK3 441 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 SDR9C7Q8NEX9 313 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 OR52E2Q8NGJ4 325 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 OR4K13Q8NH42 304 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 G6PC3Q9BUM1 346 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 FN3KQ9H479 309 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 UCKL1Q9NWZ5 548 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 TRDV1A0A1B0GX56 115 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 SLC22A31A6NKX4 558 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 METTL12A8MUP2 240 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 LEUTXA8MZ59 168 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 C17orf105B2RV13 164 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 B8ZZF3 427 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 CT45A8P0DMV1 189 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 CT45A9P0DMV2 189 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 PSKH1P11801 424 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 CD1CP29017 333 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 CSNK1EP49674 416 aaKnown RBP12.57□□□□□ -0.4
SRSF1-205ENST00000582730 SMAD4Q13485 552 aaKnown RBP12.57□□□□□ -0.4
SRSF1-205ENST00000582730 CT45A2Q5DJT8 189 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 PRAMEF17Q5VTA0 474 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 LRRC17Q8N6Y2 441 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 TEAD3Q99594 435 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 OR8D2Q9GZM6 311 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 SLC35A3Q9Y2D2 325 aa12.57□□□□□ -0.4
SRSF1-205ENST00000582730 J3QLW9 94 aa12.56□□□□□ -0.4
SRSF1-205ENST00000582730 ZNF19P17023 458 aa12.56□□□□□ -0.4
SRSF1-205ENST00000582730 HK1P19367 917 aa12.56□□□□□ -0.4
SRSF1-205ENST00000582730 SLC6A6P31641 620 aa12.56□□□□□ -0.4
SRSF1-205ENST00000582730 GPR3P46089 330 aa12.56□□□□□ -0.4
SRSF1-205ENST00000582730 MAP2K3P46734 347 aa12.56□□□□□ -0.4
SRSF1-205ENST00000582730 ATP12AP54707 1039 aa12.56□□□□□ -0.4
SRSF1-205ENST00000582730 SLC3A1Q07837 685 aa12.56□□□□□ -0.4
SRSF1-205ENST00000582730 RTL4Q6ZR62 310 aa12.56□□□□□ -0.4
SRSF1-205ENST00000582730 CREB3L2Q70SY1 520 aa12.56□□□□□ -0.4
SRSF1-205ENST00000582730 GLRX5Q86SX6 157 aa12.56□□□□□ -0.4
SRSF1-205ENST00000582730 C10orf53Q8N6V4 93 aa12.56□□□□□ -0.4
SRSF1-205ENST00000582730 PMM1Q92871 262 aa12.56□□□□□ -0.4
SRSF1-205ENST00000582730 ZNF649Q9BS31 505 aa12.56□□□□□ -0.4
SRSF1-205ENST00000582730 MKKSQ9NPJ1 570 aaPredicted RBP12.56□□□□□ -0.4
SRSF1-205ENST00000582730 SEC16AO15027 2179 aa12.56□□□□□ -0.4
SRSF1-205ENST00000582730 SHOXO15266 292 aa12.56□□□□□ -0.4
SRSF1-205ENST00000582730 APEX1P27695 318 aaKnown RBP12.56□□□□□ -0.4
SRSF1-205ENST00000582730 FGFBP1Q14512 234 aa12.56□□□□□ -0.4
SRSF1-205ENST00000582730 LCN1P1Q5VSP4 162 aa12.56□□□□□ -0.4
SRSF1-205ENST00000582730 ULK3Q6PHR2 472 aa12.56□□□□□ -0.4
SRSF1-205ENST00000582730 IDO2Q6ZQW0 420 aa12.56□□□□□ -0.4
SRSF1-205ENST00000582730 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.56□□□□□ -0.4
SRSF1-205ENST00000582730 GAL3ST4Q96RP7 486 aa12.56□□□□□ -0.4
SRSF1-205ENST00000582730 UBE2ZQ9H832 354 aaPredicted RBP12.56□□□□□ -0.4
SRSF1-205ENST00000582730 DIABLOQ9NR28 239 aa12.56□□□□□ -0.4
SRSF1-205ENST00000582730 BABAM2Q9NXR7 383 aa12.56□□□□□ -0.4
SRSF1-205ENST00000582730 DHCR7Q9UBM7 475 aaKnown RBP12.56□□□□□ -0.4
SRSF1-205ENST00000582730 VCANP13611 3396 aa12.56□□□□□ -0.4
SRSF1-205ENST00000582730 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 TLCD2A6NGC4 264 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 IFNGP01579 166 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 MYF5P13349 255 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 CTBP2P56545 445 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 ZNF321PQ8N8H1 164 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 KISS1RQ969F8 398 aaPredicted RBP12.55□□□□□ -0.4
SRSF1-205ENST00000582730 ZMYND19Q96E35 227 aaPredicted RBP12.55□□□□□ -0.4
SRSF1-205ENST00000582730 MCCC2Q9HCC0 563 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 TRIM36Q9NQ86 728 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 SLC23A1Q9UHI7 598 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 SIRT4Q9Y6E7 314 aaPredicted RBP12.55□□□□□ -0.4
SRSF1-205ENST00000582730 CACNA1IQ9P0X4 2223 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 A0A1W2PR77 199 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 SHISA3A0PJX4 238 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 SERINC4A6NH21 518 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms