RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 ZNF835Q9Y2P0 537 aa9.37□□□□□ -0.91
CCDC47-203ENST00000580986 ZNF337Q9Y3M9 751 aa9.37□□□□□ -0.91
CCDC47-203ENST00000580986 AP4S1Q9Y587 144 aa9.37□□□□□ -0.91
CCDC47-203ENST00000580986 V9GYQ6 96 aa9.37□□□□□ -0.91
CCDC47-203ENST00000580986 FAM208BQ5VWN6 2430 aa9.36□□□□□ -0.91
CCDC47-203ENST00000580986 SMG1Q96Q15 3661 aaKnown RBP9.36□□□□□ -0.91
CCDC47-203ENST00000580986 SHANK1Q9Y566 2161 aa9.36□□□□□ -0.91
CCDC47-203ENST00000580986 ARRDC5A6NEK1 342 aa9.36□□□□□ -0.91
CCDC47-203ENST00000580986 AHRRA9YTQ3 701 aa9.36□□□□□ -0.91
CCDC47-203ENST00000580986 H3BML4 177 aa9.36□□□□□ -0.91
CCDC47-203ENST00000580986 J3KTA2 159 aa9.36□□□□□ -0.91
CCDC47-203ENST00000580986 hCG_2039718K7EN88 272 aa9.36□□□□□ -0.91
CCDC47-203ENST00000580986 OR2T1O43869 369 aa9.36□□□□□ -0.91
CCDC47-203ENST00000580986 EFNA2O43921 213 aa9.36□□□□□ -0.91
CCDC47-203ENST00000580986 WDR1O75083 606 aa9.36□□□□□ -0.91
CCDC47-203ENST00000580986 PMS2P2O95744 297 aa9.36□□□□□ -0.91
CCDC47-203ENST00000580986 CST1P01037 141 aa9.36□□□□□ -0.91
CCDC47-203ENST00000580986 GABRA1P14867 456 aa9.36□□□□□ -0.91
CCDC47-203ENST00000580986 PTGS2P35354 604 aa9.36□□□□□ -0.91
CCDC47-203ENST00000580986 LIMS1P48059 325 aa9.36□□□□□ -0.91
CCDC47-203ENST00000580986 EGR4Q05215 589 aa9.36□□□□□ -0.91
CCDC47-203ENST00000580986 MFSD13AQ14CX5 517 aa9.36□□□□□ -0.91
CCDC47-203ENST00000580986 CTU2Q2VPK5 515 aaKnown RBP9.36□□□□□ -0.91
CCDC47-203ENST00000580986 SOWAHCQ53LP3 525 aaPredicted RBP9.36□□□□□ -0.91
CCDC47-203ENST00000580986 PRR30Q53SZ7 412 aaPredicted RBP9.36□□□□□ -0.91
CCDC47-203ENST00000580986 PDSS1Q5T2R2 415 aa9.36□□□□□ -0.91
CCDC47-203ENST00000580986 FAM69AQ5T7M9 428 aa9.36□□□□□ -0.91
CCDC47-203ENST00000580986 WLSQ5T9L3 541 aa9.36□□□□□ -0.91
CCDC47-203ENST00000580986 ZNF771Q7L3S4 317 aaPredicted RBP9.36□□□□□ -0.91
CCDC47-203ENST00000580986 ADGRE4PQ86SQ3 457 aa9.36□□□□□ -0.91
CCDC47-203ENST00000580986 ZNF843Q8N446 348 aa9.36□□□□□ -0.91
CCDC47-203ENST00000580986 MEIOBQ8N635 442 aa9.36□□□□□ -0.91
CCDC47-203ENST00000580986 SLC7A13Q8TCU3 470 aa9.36□□□□□ -0.91
CCDC47-203ENST00000580986 ZPLD1Q8TCW7 415 aa9.36□□□□□ -0.91
CCDC47-203ENST00000580986 LIPHQ8WWY8 451 aa9.36□□□□□ -0.91
CCDC47-203ENST00000580986 MIB2Q96AX9 1013 aa9.36□□□□□ -0.91
CCDC47-203ENST00000580986 WDYHV1Q96HA8 205 aa9.36□□□□□ -0.91
CCDC47-203ENST00000580986 PSD2Q9BQI7 771 aa9.36□□□□□ -0.91
CCDC47-203ENST00000580986 KLHL4Q9C0H6 718 aa9.36□□□□□ -0.91
CCDC47-203ENST00000580986 EXO5Q9H790 373 aa9.36□□□□□ -0.91
CCDC47-203ENST00000580986 DNAJB9Q9UBS3 223 aa9.36□□□□□ -0.91
CCDC47-203ENST00000580986 SLC6A5Q9Y345 797 aa9.36□□□□□ -0.91
CCDC47-203ENST00000580986 LYVE1Q9Y5Y7 322 aa9.36□□□□□ -0.91
CCDC47-203ENST00000580986 ZNF407Q9C0G0 2248 aa9.36□□□□□ -0.91
CCDC47-203ENST00000580986 DNAJC13O75165 2243 aa9.35□□□□□ -0.91
CCDC47-203ENST00000580986 ZFYVE26Q68DK2 2539 aa9.35□□□□□ -0.91
CCDC47-203ENST00000580986 IGKV1D-42A0A075B6H8 117 aa9.35□□□□□ -0.91
CCDC47-203ENST00000580986 TRAV36DV7A0A075B6V5 113 aa9.35□□□□□ -0.91
CCDC47-203ENST00000580986 A0A1B0GTH9 108 aa9.35□□□□□ -0.91
CCDC47-203ENST00000580986 TMEM72A0PK05 275 aa9.35□□□□□ -0.91
CCDC47-203ENST00000580986 FIGNL2A6NMB9 653 aa9.35□□□□□ -0.91
CCDC47-203ENST00000580986 SHISA8B8ZZ34 492 aa9.35□□□□□ -0.91
CCDC47-203ENST00000580986 CLOCKO15516 846 aa9.35□□□□□ -0.91
CCDC47-203ENST00000580986 EIF1BO60739 113 aaKnown RBP9.35□□□□□ -0.91
CCDC47-203ENST00000580986 GADD45GO95257 159 aa9.35□□□□□ -0.91
CCDC47-203ENST00000580986 WISP1O95388 367 aa9.35□□□□□ -0.91
CCDC47-203ENST00000580986 MT-ATP6P00846 226 aa9.35□□□□□ -0.91
CCDC47-203ENST00000580986 MT-ND1P03886 318 aa9.35□□□□□ -0.91
CCDC47-203ENST00000580986 FASP25445 335 aa9.35□□□□□ -0.91
CCDC47-203ENST00000580986 RRM2P31350 389 aa9.35□□□□□ -0.91
CCDC47-203ENST00000580986 CTBP2P56545 445 aa9.35□□□□□ -0.91
CCDC47-203ENST00000580986 RAC3P60763 192 aa9.35□□□□□ -0.91
CCDC47-203ENST00000580986 RPS3AP61247 264 aaKnown RBP9.35□□□□□ -0.91
CCDC47-203ENST00000580986 CSNK2A1P68400 391 aaPredicted RBP9.35□□□□□ -0.91
CCDC47-203ENST00000580986 ATP6AP1Q15904 470 aa9.35□□□□□ -0.91
CCDC47-203ENST00000580986 ZNF239Q16600 458 aaKnown RBP9.35□□□□□ -0.91
CCDC47-203ENST00000580986 C1orf140Q5VVS0 124 aa9.35□□□□□ -0.91
CCDC47-203ENST00000580986 TTC33Q6PID6 262 aaPredicted RBP9.35□□□□□ -0.91
CCDC47-203ENST00000580986 GFRALQ6UXV0 394 aa9.35□□□□□ -0.91
CCDC47-203ENST00000580986 WDR88Q6ZMY6 472 aa9.35□□□□□ -0.91
CCDC47-203ENST00000580986 TMPPEQ6ZT21 453 aa9.35□□□□□ -0.91
CCDC47-203ENST00000580986 MBOAT2Q6ZWT7 520 aa9.35□□□□□ -0.91
CCDC47-203ENST00000580986 FGD2Q7Z6J4 655 aa9.35□□□□□ -0.91
CCDC47-203ENST00000580986 GALNT11Q8NCW6 608 aa9.35□□□□□ -0.91
CCDC47-203ENST00000580986 MFSD8Q8NHS3 518 aa9.35□□□□□ -0.91
CCDC47-203ENST00000580986 FAM57AQ8TBR7 257 aa9.35□□□□□ -0.91
CCDC47-203ENST00000580986 TMEM239Q8WW34 195 aa9.35□□□□□ -0.91
CCDC47-203ENST00000580986 CPNE4Q96A23 557 aaPredicted RBP9.35□□□□□ -0.91
CCDC47-203ENST00000580986 NRBF2Q96F24 287 aa9.35□□□□□ -0.91
CCDC47-203ENST00000580986 BDH2Q9BUT1 245 aa9.35□□□□□ -0.91
CCDC47-203ENST00000580986 TSPAN10Q9H1Z9 355 aaPredicted RBP9.35□□□□□ -0.91
CCDC47-203ENST00000580986 COQ10BQ9H8M1 238 aa9.35□□□□□ -0.91
CCDC47-203ENST00000580986 REEP1Q9H902 201 aa9.35□□□□□ -0.91
CCDC47-203ENST00000580986 KRCC1Q9NPI7 259 aaPredicted RBP9.35□□□□□ -0.91
CCDC47-203ENST00000580986 TIGARQ9NQ88 270 aa9.35□□□□□ -0.91
CCDC47-203ENST00000580986 TMEM5Q9Y2B1 443 aa9.35□□□□□ -0.91
CCDC47-203ENST00000580986 MED31Q9Y3C7 131 aa9.35□□□□□ -0.91
CCDC47-203ENST00000580986 ZNF175Q9Y473 711 aa9.35□□□□□ -0.91
CCDC47-203ENST00000580986 CORINQ9Y5Q5 1042 aa9.35□□□□□ -0.91
CCDC47-203ENST00000580986 CFAP46Q8IYW2 2715 aa9.35□□□□□ -0.91
CCDC47-203ENST00000580986 A0A087WUU8 490 aa9.34□□□□□ -0.91
CCDC47-203ENST00000580986 A0A0J9YW62 118 aa9.34□□□□□ -0.91
CCDC47-203ENST00000580986 SH3PXD2BA1X283 911 aa9.34□□□□□ -0.91
CCDC47-203ENST00000580986 FTCDNL1E5RQL4 147 aa9.34□□□□□ -0.91
CCDC47-203ENST00000580986 H3BNX3 289 aa9.34□□□□□ -0.91
CCDC47-203ENST00000580986 PRRG2O14669 202 aa9.34□□□□□ -0.91
CCDC47-203ENST00000580986 SLC19A2O60779 497 aa9.34□□□□□ -0.91
CCDC47-203ENST00000580986 ENTPD5O75356 428 aa9.34□□□□□ -0.91
CCDC47-203ENST00000580986 C1QL1O75973 258 aa9.34□□□□□ -0.91
CCDC47-203ENST00000580986 WISP2O76076 250 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms