RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 TOR3AQ9H497 397 aa12.63□□□□□ -0.39
CSNK1D-209ENST00000578904 RIBC2Q9H4K1 309 aa12.63□□□□□ -0.39
CSNK1D-209ENST00000578904 ZFP64Q9NPA5 681 aa12.63□□□□□ -0.39
CSNK1D-209ENST00000578904 MED17Q9NVC6 651 aa12.63□□□□□ -0.39
CSNK1D-209ENST00000578904 LUZP4Q9P127 313 aa12.63□□□□□ -0.39
CSNK1D-209ENST00000578904 OSGIN1Q9UJX0 560 aa12.63□□□□□ -0.39
CSNK1D-209ENST00000578904 LRCH1Q9Y2L9 728 aa12.63□□□□□ -0.39
CSNK1D-209ENST00000578904 TMED7Q9Y3B3 224 aa12.63□□□□□ -0.39
CSNK1D-209ENST00000578904 MRPS18CQ9Y3D5 142 aaKnown RBP12.63□□□□□ -0.39
CSNK1D-209ENST00000578904 AP4B1Q9Y6B7 739 aa12.63□□□□□ -0.39
CSNK1D-209ENST00000578904 SMG1Q96Q15 3661 aaKnown RBP12.63□□□□□ -0.39
CSNK1D-209ENST00000578904 SETXQ7Z333 2677 aaKnown RBP12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 A0A0G2JMM0 328 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 A0A1W2PPB8 328 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 A0A1W2PRS3 328 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 C7orf72A4D263 438 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 A8MVM7 634 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 KIR3DP1A8MWS1 328 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 EFCAB9A8MZ26 197 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 LINC01387J3KSC0 135 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 ZNF208O43345 1280 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 DENRO43583 198 aaKnown RBP12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 OR2T1O43869 369 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 RCBTB2O95199 551 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 LYPD3O95274 346 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 THY1P04216 161 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 HIST1H2ABP04908 130 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 SAGP10523 405 aaPredicted RBP12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 POU2F1P14859 743 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 PRKCAP17252 672 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 BMP7P18075 431 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 DPP4P27487 766 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 SRD5A2P31213 254 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 OMPP47874 163 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 SLC9A3P48764 834 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 CLK1P49759 484 aaKnown RBP12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 NUP107P57740 925 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 CRYZQ08257 329 aaKnown RBP12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 NPRL3Q12980 569 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 MFSD13AQ14CX5 517 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 TOMM20Q15388 145 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 PLPPR5Q32ZL2 321 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 ZIK1Q3SY52 487 aaPredicted RBP12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 CMPK2Q5EBM0 449 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 NHSL2Q5HYW2 709 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 TMPRSS11FQ6ZWK6 438 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 HIST3H2AQ7L7L0 130 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 PRICKLE2Q7Z3G6 844 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 ZER1Q7Z7L7 766 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 WDSUB1Q8N9V3 476 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 TEX47Q8TBZ9 253 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 OSTF1Q92882 214 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 HIST1H2ACQ93077 130 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 NTNG2Q96CW9 530 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 SGTBQ96EQ0 304 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 FAM46AQ96IP4 442 aaKnown RBP12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 BARD1Q99728 777 aaKnown RBP12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 NIPSNAP1Q9BPW8 284 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 PIGQQ9BRB3 760 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 GABARAPL3Q9BY60 117 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 FAM118AQ9NWS6 357 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 CHRNA9Q9UGM1 479 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 TMEFF2Q9UIK5 374 aaPredicted RBP12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 VDAC3Q9Y277 283 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 PIEZO2Q9H5I5 2752 aa12.62□□□□□ -0.39
CSNK1D-209ENST00000578904 BSNQ9UPA5 3926 aa12.61□□□□□ -0.39
CSNK1D-209ENST00000578904 TRAV36DV7A0A075B6V5 113 aa12.61□□□□□ -0.39
CSNK1D-209ENST00000578904 LOC100130705A0A1B0GUX0 176 aa12.61□□□□□ -0.39
CSNK1D-209ENST00000578904 UNC119BA6NIH7 251 aa12.61□□□□□ -0.39
CSNK1D-209ENST00000578904 GJE1A6NN92 205 aa12.61□□□□□ -0.39
CSNK1D-209ENST00000578904 H3BN98 237 aa12.61□□□□□ -0.39
CSNK1D-209ENST00000578904 ACOT7O00154 380 aa12.61□□□□□ -0.39
CSNK1D-209ENST00000578904 ETV2O00321 342 aaPredicted RBP12.61□□□□□ -0.39
CSNK1D-209ENST00000578904 ADAM10O14672 748 aa12.61□□□□□ -0.39
CSNK1D-209ENST00000578904 SLC16A6O15403 523 aa12.61□□□□□ -0.39
CSNK1D-209ENST00000578904 SUSD5O60279 629 aa12.61□□□□□ -0.39
CSNK1D-209ENST00000578904 HCN1O60741 890 aa12.61□□□□□ -0.39
CSNK1D-209ENST00000578904 AHSA1O95433 338 aa12.61□□□□□ -0.39
CSNK1D-209ENST00000578904 MT-ATP6P00846 226 aa12.61□□□□□ -0.39
CSNK1D-209ENST00000578904 ZNF17P17021 662 aa12.61□□□□□ -0.39
CSNK1D-209ENST00000578904 HK1P19367 917 aa12.61□□□□□ -0.39
CSNK1D-209ENST00000578904 ELK4P28324 431 aa12.61□□□□□ -0.39
CSNK1D-209ENST00000578904 GSSP48637 474 aa12.61□□□□□ -0.39
CSNK1D-209ENST00000578904 DNASE1L1P49184 302 aa12.61□□□□□ -0.39
CSNK1D-209ENST00000578904 MEOX1P50221 254 aa12.61□□□□□ -0.39
CSNK1D-209ENST00000578904 PLGLB1Q02325 96 aa12.61□□□□□ -0.39
CSNK1D-209ENST00000578904 NFATC3Q12968 1075 aa12.61□□□□□ -0.39
CSNK1D-209ENST00000578904 SELENBP1Q13228 472 aa12.61□□□□□ -0.39
CSNK1D-209ENST00000578904 KEAP1Q14145 624 aa12.61□□□□□ -0.39
CSNK1D-209ENST00000578904 INAQ16352 499 aa12.61□□□□□ -0.39
CSNK1D-209ENST00000578904 PLEKHN1Q494U1 663 aaPredicted RBP12.61□□□□□ -0.39
CSNK1D-209ENST00000578904 SLC36A3Q495N2 470 aa12.61□□□□□ -0.39
CSNK1D-209ENST00000578904 KRT80Q6KB66 452 aa12.61□□□□□ -0.39
CSNK1D-209ENST00000578904 C3orf33Q6P1S2 294 aa12.61□□□□□ -0.39
CSNK1D-209ENST00000578904 KLHL17Q6TDP4 642 aa12.61□□□□□ -0.39
CSNK1D-209ENST00000578904 RASSF6Q6ZTQ3 369 aa12.61□□□□□ -0.39
CSNK1D-209ENST00000578904 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.61□□□□□ -0.39
CSNK1D-209ENST00000578904 SULF2Q8IWU5 870 aa12.61□□□□□ -0.39
CSNK1D-209ENST00000578904 DEPDC4Q8N2C3 294 aa12.61□□□□□ -0.39
CSNK1D-209ENST00000578904 C10orf53Q8N6V4 93 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms