RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 AGTR1P30556 359 aa17.23■□□□□ 0.35
SS18-208ENST00000577751 KCNJ5P48544 419 aa17.23■□□□□ 0.35
SS18-208ENST00000577751 CTBP2P56545 445 aa17.23■□□□□ 0.35
SS18-208ENST00000577751 VEZF1Q14119 521 aa17.23■□□□□ 0.35
SS18-208ENST00000577751 C8orf82Q6P1X6 216 aaPredicted RBP17.23■□□□□ 0.35
SS18-208ENST00000577751 GDF7Q7Z4P5 450 aa17.23■□□□□ 0.35
SS18-208ENST00000577751 ATG4DQ86TL0 474 aaPredicted RBP17.23■□□□□ 0.35
SS18-208ENST00000577751 ZNF610Q8N9Z0 462 aa17.23■□□□□ 0.35
SS18-208ENST00000577751 SMYD1Q8NB12 490 aa17.23■□□□□ 0.35
SS18-208ENST00000577751 PSD2Q9BQI7 771 aa17.23■□□□□ 0.35
SS18-208ENST00000577751 WFDC6Q9BQY6 131 aa17.23■□□□□ 0.35
SS18-208ENST00000577751 POTEKPQ9BYX7 375 aa17.23■□□□□ 0.35
SS18-208ENST00000577751 OPN3Q9H1Y3 402 aaPredicted RBP17.23■□□□□ 0.35
SS18-208ENST00000577751 EFCAB1Q9HAE3 211 aa17.23■□□□□ 0.35
SS18-208ENST00000577751 BCO1Q9HAY6 547 aa17.23■□□□□ 0.35
SS18-208ENST00000577751 TMEM181Q9P2C4 612 aa17.23■□□□□ 0.35
SS18-208ENST00000577751 KLHL13Q9P2N7 655 aa17.23■□□□□ 0.35
SS18-208ENST00000577751 PROCRQ9UNN8 238 aa17.23■□□□□ 0.35
SS18-208ENST00000577751 AIM2O14862 343 aa17.22■□□□□ 0.35
SS18-208ENST00000577751 TPST2O60704 377 aa17.22■□□□□ 0.35
SS18-208ENST00000577751 C8BP07358 591 aa17.22■□□□□ 0.35
SS18-208ENST00000577751 IMPDH2P12268 514 aa17.22■□□□□ 0.35
SS18-208ENST00000577751 HTR2AP28223 471 aa17.22■□□□□ 0.35
SS18-208ENST00000577751 PRDX6P30041 224 aa17.22■□□□□ 0.35
SS18-208ENST00000577751 CPA2P48052 419 aa17.22■□□□□ 0.35
SS18-208ENST00000577751 CRYBA2P53672 197 aa17.22■□□□□ 0.35
SS18-208ENST00000577751 H3F3AP84243 136 aa17.22■□□□□ 0.35
SS18-208ENST00000577751 SNTB1Q13884 538 aaKnown RBP17.22■□□□□ 0.35
SS18-208ENST00000577751 ERICH5Q6P6B1 374 aa17.22■□□□□ 0.35
SS18-208ENST00000577751 C6orf89Q6UWU4 347 aa17.22■□□□□ 0.35
SS18-208ENST00000577751 HACD2Q6Y1H2 254 aa17.22■□□□□ 0.35
SS18-208ENST00000577751 ARPINQ7Z6K5 226 aa17.22■□□□□ 0.35
SS18-208ENST00000577751 LSRQ86X29 649 aaPredicted RBP17.22■□□□□ 0.35
SS18-208ENST00000577751 GPR32P1Q8NGA4 272 aa17.22■□□□□ 0.35
SS18-208ENST00000577751 TAMM41Q96BW9 452 aa17.22■□□□□ 0.35
SS18-208ENST00000577751 CMTM5Q96DZ9 223 aa17.22■□□□□ 0.35
SS18-208ENST00000577751 HOPXQ9BPY8 73 aaPredicted RBP17.22■□□□□ 0.35
SS18-208ENST00000577751 C12orf10Q9HB07 376 aa17.22■□□□□ 0.35
SS18-208ENST00000577751 KLHL28Q9NXS3 571 aa17.22■□□□□ 0.35
SS18-208ENST00000577751 ELOVL5Q9NYP7 299 aa17.22■□□□□ 0.35
SS18-208ENST00000577751 TESQ9UGI8 421 aaKnown RBP17.22■□□□□ 0.35
SS18-208ENST00000577751 USP22Q9UPT9 525 aa17.22■□□□□ 0.35
SS18-208ENST00000577751 MPDZO75970 2070 aa17.22■□□□□ 0.35
SS18-208ENST00000577751 TMEM229AB2RXF0 380 aa17.21■□□□□ 0.35
SS18-208ENST00000577751 NPIPB7O75200 414 aa17.21■□□□□ 0.35
SS18-208ENST00000577751 OPN1SWP03999 348 aa17.21■□□□□ 0.35
SS18-208ENST00000577751 FESP07332 822 aa17.21■□□□□ 0.35
SS18-208ENST00000577751 YES1P07947 543 aa17.21■□□□□ 0.35
SS18-208ENST00000577751 CD247P20963 164 aa17.21■□□□□ 0.35
SS18-208ENST00000577751 SSTR2P30874 369 aa17.21■□□□□ 0.35
SS18-208ENST00000577751 KIR2DL3P43628 341 aa17.21■□□□□ 0.35
SS18-208ENST00000577751 TUSC5Q8IXB3 177 aa17.21■□□□□ 0.35
SS18-208ENST00000577751 SLC15A3Q8IY34 581 aa17.21■□□□□ 0.35
SS18-208ENST00000577751 ARHGDIGQ99819 225 aa17.21■□□□□ 0.35
SS18-208ENST00000577751 TACO1Q9BSH4 297 aaKnown RBP17.21■□□□□ 0.35
SS18-208ENST00000577751 PRR14Q9BWN1 585 aa17.21■□□□□ 0.35
SS18-208ENST00000577751 TRIM2Q9C040 744 aa17.21■□□□□ 0.35
SS18-208ENST00000577751 CMTM6Q9NX76 183 aa17.21■□□□□ 0.35
SS18-208ENST00000577751 KLHL9Q9P2J3 617 aa17.21■□□□□ 0.35
SS18-208ENST00000577751 AP3M1Q9Y2T2 418 aa17.21■□□□□ 0.35
SS18-208ENST00000577751 ARL2BPQ9Y2Y0 163 aa17.21■□□□□ 0.35
SS18-208ENST00000577751 CCT8L1PA6NM43 557 aa17.2■□□□□ 0.34
SS18-208ENST00000577751 A8MVM7 634 aa17.2■□□□□ 0.34
SS18-208ENST00000577751 FAM220BPB1ANY3 271 aa17.2■□□□□ 0.34
SS18-208ENST00000577751 CD79BP40259 229 aa17.2■□□□□ 0.34
SS18-208ENST00000577751 RGS8P57771 180 aaPredicted RBP17.2■□□□□ 0.34
SS18-208ENST00000577751 FAM27E3Q08E93 113 aa17.2■□□□□ 0.34
SS18-208ENST00000577751 RASGEF1BQ0VAM2 473 aa17.2■□□□□ 0.34
SS18-208ENST00000577751 BNIP2Q12982 314 aa17.2■□□□□ 0.34
SS18-208ENST00000577751 PDK3Q15120 406 aa17.2■□□□□ 0.34
SS18-208ENST00000577751 NRF1Q16656 503 aa17.2■□□□□ 0.34
SS18-208ENST00000577751 TMEM201Q5SNT2 666 aa17.2■□□□□ 0.34
SS18-208ENST00000577751 ABLIM2Q6H8Q1 611 aa17.2■□□□□ 0.34
SS18-208ENST00000577751 OR52E4Q8NGH9 312 aa17.2■□□□□ 0.34
SS18-208ENST00000577751 ZHX1-C8orf76Q96EF9 292 aa17.2■□□□□ 0.34
SS18-208ENST00000577751 DNAJA3Q96EY1 480 aa17.2■□□□□ 0.34
SS18-208ENST00000577751 ZNF559Q9BR84 538 aa17.2■□□□□ 0.34
SS18-208ENST00000577751 CRIM1Q9NZV1 1036 aa17.2■□□□□ 0.34
SS18-208ENST00000577751 SLC13A4Q9UKG4 626 aa17.2■□□□□ 0.34
SS18-208ENST00000577751 ITPR2Q14571 2701 aa17.2■□□□□ 0.34
SS18-208ENST00000577751 IGKV3D-15A0A087WSY6 115 aa17.19■□□□□ 0.34
SS18-208ENST00000577751 A0A1B0GWA3 101 aa17.19■□□□□ 0.34
SS18-208ENST00000577751 TUBAL3A6NHL2 446 aa17.19■□□□□ 0.34
SS18-208ENST00000577751 ZNF724A8MTY0 619 aa17.19■□□□□ 0.34
SS18-208ENST00000577751 ZNF814B7Z6K7 855 aa17.19■□□□□ 0.34
SS18-208ENST00000577751 FPR1P21462 350 aa17.19■□□□□ 0.34
SS18-208ENST00000577751 CPOXP36551 454 aa17.19■□□□□ 0.34
SS18-208ENST00000577751 OR2B6P58173 313 aa17.19■□□□□ 0.34
SS18-208ENST00000577751 SLC35A1P78382 337 aa17.19■□□□□ 0.34
SS18-208ENST00000577751 EGR4Q05215 589 aa17.19■□□□□ 0.34
SS18-208ENST00000577751 FAM91A1Q658Y4 838 aa17.19■□□□□ 0.34
SS18-208ENST00000577751 NUFIP2Q7Z417 695 aaKnown RBP17.19■□□□□ 0.34
SS18-208ENST00000577751 ANKS4BQ8N8V4 417 aa17.19■□□□□ 0.34
SS18-208ENST00000577751 OR2T12Q8NG77 320 aa17.19■□□□□ 0.34
SS18-208ENST00000577751 STK35Q8TDR2 534 aa17.19■□□□□ 0.34
SS18-208ENST00000577751 FAM222BQ8WU58 562 aa17.19■□□□□ 0.34
SS18-208ENST00000577751 DNAJA4Q8WW22 397 aaPredicted RBP17.19■□□□□ 0.34
SS18-208ENST00000577751 RASSF5Q8WWW0 418 aa17.19■□□□□ 0.34
SS18-208ENST00000577751 ZNF300Q96RE9 604 aaPredicted RBP17.19■□□□□ 0.34
SS18-208ENST00000577751 CCT8L2Q96SF2 557 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms