RNA–Protein interactions for RNA: ENST00000576921.1

HCFC1R1-209, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best)

Gene HCFC1R1, Length 1,199 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-209ENST00000576921 A0A0G2JND7 137 aa18.75■□□□□ 0.59
HCFC1R1-209ENST00000576921 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.75■□□□□ 0.59
HCFC1R1-209ENST00000576921 ZC3H12DA2A288 527 aaKnown RBP18.75■□□□□ 0.59
HCFC1R1-209ENST00000576921 ZNF724A8MTY0 619 aa18.75■□□□□ 0.59
HCFC1R1-209ENST00000576921 ZNF208O43345 1280 aa18.75■□□□□ 0.59
HCFC1R1-209ENST00000576921 BMP2P12643 396 aa18.75■□□□□ 0.59
HCFC1R1-209ENST00000576921 PRG2P13727 222 aa18.75■□□□□ 0.59
HCFC1R1-209ENST00000576921 PPIBP23284 216 aaKnown RBP18.75■□□□□ 0.59
HCFC1R1-209ENST00000576921 CXCR1P25024 350 aa18.75■□□□□ 0.59
HCFC1R1-209ENST00000576921 EDNRAP25101 427 aa18.75■□□□□ 0.59
HCFC1R1-209ENST00000576921 DEFB113Q30KQ7 82 aa18.75■□□□□ 0.59
HCFC1R1-209ENST00000576921 SERPINA11Q86U17 422 aa18.75■□□□□ 0.59
HCFC1R1-209ENST00000576921 C10orf111Q8N326 155 aa18.75■□□□□ 0.59
HCFC1R1-209ENST00000576921 MBD6Q96DN6 1003 aa18.75■□□□□ 0.59
HCFC1R1-209ENST00000576921 SPATA9Q9BWV2 254 aa18.75■□□□□ 0.59
HCFC1R1-209ENST00000576921 TMEM45AQ9NWC5 275 aa18.75■□□□□ 0.59
HCFC1R1-209ENST00000576921 TRIM33Q9UPN9 1127 aa18.75■□□□□ 0.59
HCFC1R1-209ENST00000576921 A0A1W2PP18 115 aa18.74■□□□□ 0.59
HCFC1R1-209ENST00000576921 ZNF814B7Z6K7 855 aa18.74■□□□□ 0.59
HCFC1R1-209ENST00000576921 FRS3O43559 492 aa18.74■□□□□ 0.59
HCFC1R1-209ENST00000576921 DNPH1O43598 174 aa18.74■□□□□ 0.59
HCFC1R1-209ENST00000576921 CD53P19397 219 aa18.74■□□□□ 0.59
HCFC1R1-209ENST00000576921 ACAA2P42765 397 aaKnown RBP18.74■□□□□ 0.59
HCFC1R1-209ENST00000576921 ZSWIM7Q19AV6 140 aa18.74■□□□□ 0.59
HCFC1R1-209ENST00000576921 BEX5Q5H9J7 111 aa18.74■□□□□ 0.59
HCFC1R1-209ENST00000576921 SFRP5Q5T4F7 317 aa18.74■□□□□ 0.59
HCFC1R1-209ENST00000576921 PRAMEF8Q5VWM4 474 aa18.74■□□□□ 0.59
HCFC1R1-209ENST00000576921 PRAMEF7Q5VXH5 474 aa18.74■□□□□ 0.59
HCFC1R1-209ENST00000576921 WBP2NLQ6ICG8 309 aa18.74■□□□□ 0.59
HCFC1R1-209ENST00000576921 Q6ZT83 130 aa18.74■□□□□ 0.59
HCFC1R1-209ENST00000576921 CCDC103Q8IW40 242 aa18.74■□□□□ 0.59
HCFC1R1-209ENST00000576921 STON2Q8WXE9 905 aa18.74■□□□□ 0.59
HCFC1R1-209ENST00000576921 HDHD5Q9BXW7 423 aa18.74■□□□□ 0.59
HCFC1R1-209ENST00000576921 OR10A4Q9H209 315 aa18.74■□□□□ 0.59
HCFC1R1-209ENST00000576921 IKZF5Q9H5V7 419 aa18.74■□□□□ 0.59
HCFC1R1-209ENST00000576921 BCL2L10Q9HD36 194 aa18.74■□□□□ 0.59
HCFC1R1-209ENST00000576921 TRAPPC4Q9Y296 219 aa18.74■□□□□ 0.59
HCFC1R1-209ENST00000576921 NOSIPQ9Y314 301 aaKnown RBP18.74■□□□□ 0.59
HCFC1R1-209ENST00000576921 CHST2Q9Y4C5 530 aa18.74■□□□□ 0.59
HCFC1R1-209ENST00000576921 DSCAMO60469 2012 aa18.73■□□□□ 0.59
HCFC1R1-209ENST00000576921 IGKV3D-15A0A087WSY6 115 aa18.73■□□□□ 0.59
HCFC1R1-209ENST00000576921 TRBV5-3A0A0A0MS03 114 aa18.73■□□□□ 0.59
HCFC1R1-209ENST00000576921 ZNF716A6NP11 495 aa18.73■□□□□ 0.59
HCFC1R1-209ENST00000576921 EVPLLA8MZ36 301 aa18.73■□□□□ 0.59
HCFC1R1-209ENST00000576921 KLF4O43474 513 aa18.73■□□□□ 0.59
HCFC1R1-209ENST00000576921 RAMP1O60894 148 aa18.73■□□□□ 0.59
HCFC1R1-209ENST00000576921 LYZL6O75951 148 aa18.73■□□□□ 0.59
HCFC1R1-209ENST00000576921 PGM3O95394 542 aa18.73■□□□□ 0.59
HCFC1R1-209ENST00000576921 IGHV3-9P01782 118 aa18.73■□□□□ 0.59
HCFC1R1-209ENST00000576921 ARAFP10398 606 aa18.73■□□□□ 0.59
HCFC1R1-209ENST00000576921 IMPDH2P12268 514 aa18.73■□□□□ 0.59
HCFC1R1-209ENST00000576921 LOXP28300 417 aaPredicted RBP18.73■□□□□ 0.59
HCFC1R1-209ENST00000576921 SLC35A1P78382 337 aa18.73■□□□□ 0.59
HCFC1R1-209ENST00000576921 BNIP2Q12982 314 aa18.73■□□□□ 0.59
HCFC1R1-209ENST00000576921 P2RY6Q15077 328 aa18.73■□□□□ 0.59
HCFC1R1-209ENST00000576921 PLPPR2Q96GM1 343 aa18.73■□□□□ 0.59
HCFC1R1-209ENST00000576921 ADAM19Q9H013 955 aa18.73■□□□□ 0.59
HCFC1R1-209ENST00000576921 LEF1Q9UJU2 399 aaPredicted RBP18.73■□□□□ 0.59
HCFC1R1-209ENST00000576921 CORO2BQ9UQ03 480 aa18.73■□□□□ 0.59
HCFC1R1-209ENST00000576921 ANGPT2O15123 496 aa18.72■□□□□ 0.59
HCFC1R1-209ENST00000576921 FPR1P21462 350 aa18.72■□□□□ 0.59
HCFC1R1-209ENST00000576921 IDUAP35475 653 aa18.72■□□□□ 0.59
HCFC1R1-209ENST00000576921 HOXC5Q00444 222 aa18.72■□□□□ 0.59
HCFC1R1-209ENST00000576921 CDK6Q00534 326 aa18.72■□□□□ 0.59
HCFC1R1-209ENST00000576921 ITGADQ13349 1161 aa18.72■□□□□ 0.59
HCFC1R1-209ENST00000576921 CAPRIN1Q14444 709 aaKnown RBP18.72■□□□□ 0.59
HCFC1R1-209ENST00000576921 PDK3Q15120 406 aa18.72■□□□□ 0.59
HCFC1R1-209ENST00000576921 STK11Q15831 433 aa18.72■□□□□ 0.59
HCFC1R1-209ENST00000576921 BHLHA15Q7RTS1 189 aaPredicted RBP18.72■□□□□ 0.59
HCFC1R1-209ENST00000576921 DHDDSQ86SQ9 333 aa18.72■□□□□ 0.59
HCFC1R1-209ENST00000576921 UBE2J2Q8N2K1 259 aa18.72■□□□□ 0.59
HCFC1R1-209ENST00000576921 APH1AQ96BI3 265 aa18.72■□□□□ 0.59
HCFC1R1-209ENST00000576921 CPPED1Q9BRF8 314 aaPredicted RBP18.72■□□□□ 0.59
HCFC1R1-209ENST00000576921 SIKE1Q9BRV8 207 aa18.72■□□□□ 0.59
HCFC1R1-209ENST00000576921 NAA11Q9BSU3 229 aaPredicted RBP18.72■□□□□ 0.59
HCFC1R1-209ENST00000576921 ZNF385DQ9H6B1 395 aa18.72■□□□□ 0.59
HCFC1R1-209ENST00000576921 ZNF446Q9NWS9 450 aa18.72■□□□□ 0.59
HCFC1R1-209ENST00000576921 ROS1P08922 2347 aa18.72■□□□□ 0.59
HCFC1R1-209ENST00000576921 EIF1BO60739 113 aaKnown RBP18.71■□□□□ 0.59
HCFC1R1-209ENST00000576921 MAP2K6P52564 334 aa18.71■□□□□ 0.59
HCFC1R1-209ENST00000576921 NR1H2P55055 460 aa18.71■□□□□ 0.59
HCFC1R1-209ENST00000576921 CEACAM7Q14002 265 aa18.71■□□□□ 0.59
HCFC1R1-209ENST00000576921 SCARB2Q14108 478 aa18.71■□□□□ 0.59
HCFC1R1-209ENST00000576921 OR7A5Q15622 319 aa18.71■□□□□ 0.59
HCFC1R1-209ENST00000576921 REEP3Q6NUK4 255 aa18.71■□□□□ 0.59
HCFC1R1-209ENST00000576921 KRT73Q86Y46 540 aa18.71■□□□□ 0.59
HCFC1R1-209ENST00000576921 CCL19Q99731 98 aa18.71■□□□□ 0.59
HCFC1R1-209ENST00000576921 TMEM120AQ9BXJ8 343 aa18.71■□□□□ 0.59
HCFC1R1-209ENST00000576921 NDUFAF1Q9Y375 327 aa18.71■□□□□ 0.59
HCFC1R1-209ENST00000576921 FLNAP21333 2647 aaKnown RBP18.7■□□□□ 0.58
HCFC1R1-209ENST00000576921 GPR171O14626 319 aa18.7■□□□□ 0.58
HCFC1R1-209ENST00000576921 GPIP06744 558 aa18.7■□□□□ 0.58
HCFC1R1-209ENST00000576921 ETS2P15036 469 aa18.7■□□□□ 0.58
HCFC1R1-209ENST00000576921 SLC6A2P23975 617 aa18.7■□□□□ 0.58
HCFC1R1-209ENST00000576921 AQP1P29972 269 aa18.7■□□□□ 0.58
HCFC1R1-209ENST00000576921 ADSLP30566 484 aaPredicted RBP18.7■□□□□ 0.58
HCFC1R1-209ENST00000576921 SLC16A1P53985 500 aa18.7■□□□□ 0.58
HCFC1R1-209ENST00000576921 SF3A3Q12874 501 aaKnown RBP eCLIP18.7■□□□□ 0.58
HCFC1R1-209ENST00000576921 TAB1Q15750 504 aa18.7■□□□□ 0.58
HCFC1R1-209ENST00000576921 ACKR1Q16570 336 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms