RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 LILRB1Q8NHL6 650 aaPredicted RBP5.53□□□□□ -1.52
NUP88-212ENST00000576708 RFWD2Q8NHY2 731 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 ZFP28Q8NHY6 868 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 RAB3IL1Q8TBN0 382 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 TSPEARQ8WU66 669 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 ABHD3Q8WU67 409 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 TWIST2Q8WVJ9 160 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 IGFBPL1Q8WX77 278 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 OSTF1Q92882 214 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 NEUROG1Q92886 237 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 S100PBPQ96BU1 408 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 ZBED6CLQ96FA7 236 aaPredicted RBP5.53□□□□□ -1.52
NUP88-212ENST00000576708 NEIL1Q96FI4 390 aaPredicted RBP5.53□□□□□ -1.52
NUP88-212ENST00000576708 GMPPAQ96IJ6 420 aaPredicted RBP5.53□□□□□ -1.52
NUP88-212ENST00000576708 RAX2Q96IS3 184 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 C3orf30Q96M34 536 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 MS4A4EQ96PG1 132 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 ACTR6Q9GZN1 396 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 CXorf36Q9H7Y0 433 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 ANKZF1Q9H8Y5 726 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 UBQLN4Q9NRR5 601 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 ACSS1Q9NUB1 689 aaPredicted RBP5.53□□□□□ -1.52
NUP88-212ENST00000576708 ZCCHC3Q9NUD5 404 aaKnown RBP5.53□□□□□ -1.52
NUP88-212ENST00000576708 MKS1Q9NXB0 559 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 ATP6V1HQ9UI12 483 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 CARD8Q9Y2G2 431 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 SNX8Q9Y5X2 465 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 ANK3Q12955 4377 aaKnown RBP5.53□□□□□ -1.52
NUP88-212ENST00000576708 RAI1Q7Z5J4 1906 aaPredicted RBP5.52□□□□□ -1.53
NUP88-212ENST00000576708 CENPVL1A0A0U1RR11 272 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 C9JVG2 144 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 INAFM1C9JVW0 142 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 ZNF195O14628 629 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 SCAMP2O15127 329 aaKnown RBP5.52□□□□□ -1.53
NUP88-212ENST00000576708 SKAP2O75563 359 aaPredicted RBP5.52□□□□□ -1.53
NUP88-212ENST00000576708 LY86O95711 162 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 NUDT14O95848 222 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 C6orf47O95873 294 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 SCGB1D2O95969 90 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 TUBBP07437 444 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 FGF4P08620 206 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 GAAP10253 952 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 NEFHP12036 1026 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 HPGDP15428 266 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 EDNRAP25101 427 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 CCT3P49368 545 aaKnown RBP5.52□□□□□ -1.53
NUP88-212ENST00000576708 CASP9P55211 416 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 RAC3P60763 192 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 NAA20P61599 178 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 HGFACQ04756 655 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 TP53BP2Q13625 1128 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 CAPRIN1Q14444 709 aaKnown RBP5.52□□□□□ -1.53
NUP88-212ENST00000576708 PTGR1Q14914 329 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 ZNF239Q16600 458 aaKnown RBP5.52□□□□□ -1.53
NUP88-212ENST00000576708 TMEM176BQ3YBM2 270 aaPredicted RBP5.52□□□□□ -1.53
NUP88-212ENST00000576708 SPDYE7PQ495Y7 208 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 KLHL26Q53HC5 615 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 FBLN7Q53RD9 439 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 BEX5Q5H9J7 111 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 IL23RQ5VWK5 629 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 TRABD2AQ86V40 505 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 TUSC5Q8IXB3 177 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 ZNF614Q8N883 585 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 BANPQ8N9N5 519 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 OR5D16Q8NGK9 328 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 OR5AK3PQ8NH89 298 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 GPR119Q8TDV5 335 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 ACTRT2Q8TDY3 377 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 OR5P2Q8WZ92 322 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 AKAP1Q92667 903 aaKnown RBP eCLIP5.52□□□□□ -1.53
NUP88-212ENST00000576708 ZBTB9Q96C00 473 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 SLC7A6OSQ96CW6 309 aaPredicted RBP5.52□□□□□ -1.53
NUP88-212ENST00000576708 ZNF764Q96H86 408 aaPredicted RBP5.52□□□□□ -1.53
NUP88-212ENST00000576708 METTL2AQ96IZ6 378 aaKnown RBP5.52□□□□□ -1.53
NUP88-212ENST00000576708 MPP4Q96JB8 637 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 KLHL15Q96M94 604 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 PAIP2Q9BPZ3 127 aaKnown RBP5.52□□□□□ -1.53
NUP88-212ENST00000576708 BDH2Q9BUT1 245 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 PIGUQ9H490 435 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 SERHL2Q9H4I8 314 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 COQ10BQ9H8M1 238 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 ING3Q9NXR8 418 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 ZDHHC2Q9UIJ5 367 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 MCTS1Q9ULC4 181 aaKnown RBP5.52□□□□□ -1.53
NUP88-212ENST00000576708 ICAM5Q9UMF0 924 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 GTF2A1LQ9UNN4 478 aa5.52□□□□□ -1.53
NUP88-212ENST00000576708 A0A1W2PQD3 144 aa5.51□□□□□ -1.53
NUP88-212ENST00000576708 ZNF814B7Z6K7 855 aa5.51□□□□□ -1.53
NUP88-212ENST00000576708 NPIPB9F8W1W9 429 aa5.51□□□□□ -1.53
NUP88-212ENST00000576708 KIF2AO00139 706 aaPredicted RBP5.51□□□□□ -1.53
NUP88-212ENST00000576708 GTPBP1O00178 669 aaKnown RBP5.51□□□□□ -1.53
NUP88-212ENST00000576708 HS3ST1O14792 307 aa5.51□□□□□ -1.53
NUP88-212ENST00000576708 CLOCKO15516 846 aa5.51□□□□□ -1.53
NUP88-212ENST00000576708 CDC14BO60729 498 aa5.51□□□□□ -1.53
NUP88-212ENST00000576708 GCM2O75603 506 aaPredicted RBP5.51□□□□□ -1.53
NUP88-212ENST00000576708 LYPLA1O75608 230 aaPredicted RBP5.51□□□□□ -1.53
NUP88-212ENST00000576708 TOX4O94842 621 aa5.51□□□□□ -1.53
NUP88-212ENST00000576708 H6PDO95479 791 aa5.51□□□□□ -1.53
NUP88-212ENST00000576708 CHEK2O96017 543 aa5.51□□□□□ -1.53
NUP88-212ENST00000576708 ADAP00813 363 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms