RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 NDUFAF4Q9P032 175 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 RHCGQ9UBD6 479 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 STOML1Q9UBI4 398 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 SH3BGRL2Q9UJC5 107 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 TINAGQ9UJW2 476 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 SLC7A7Q9UM01 511 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 FAM32AQ9Y421 112 aaKnown RBP7.7□□□□□ -1.18
NUP88-211ENST00000575976 SPIN1Q9Y657 262 aaPredicted RBP7.7□□□□□ -1.18
NUP88-211ENST00000575976 RELNP78509 3460 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 IGKV1D-42A0A075B6H8 117 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 TCRBV3S1A0A5B6 114 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 DHRS12A0PJE2 317 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 ERICH4A6NGS2 130 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 FIGNL2A6NMB9 653 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 GJE1A6NN92 205 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 CLCA1A8K7I4 914 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 A8MVM7 634 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 KDM4EB2RXH2 506 aaPredicted RBP7.69□□□□□ -1.18
NUP88-211ENST00000575976 ANKRD65E5RJM6 399 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 ADAMDEC1O15204 470 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 CXCL13O43927 109 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 MT-ND1P03886 318 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 FABP3P05413 133 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 STSP08842 583 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 PNMTP11086 282 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 UMPSP11172 480 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 IMPDH2P12268 514 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 GABRA1P14867 456 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 RHCEP18577 417 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 PTNP21246 168 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 FKBP2P26885 142 aaKnown RBP7.69□□□□□ -1.18
NUP88-211ENST00000575976 SLC7A1P30825 629 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 IFNA8P32881 189 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 CA7P43166 264 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 EIF1AXP47813 144 aaKnown RBP7.69□□□□□ -1.18
NUP88-211ENST00000575976 MAP2K6P52564 334 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 RPS3AP61247 264 aaKnown RBP7.69□□□□□ -1.18
NUP88-211ENST00000575976 EGR4Q05215 589 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 CHRNB3Q05901 458 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 ST3GAL3Q11203 375 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 CCNIQ14094 377 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 SGCBQ16585 318 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 FAM98BQ52LJ0 330 aaKnown RBP7.69□□□□□ -1.18
NUP88-211ENST00000575976 SWT1Q5T5J6 900 aaKnown RBP7.69□□□□□ -1.18
NUP88-211ENST00000575976 HBMQ6B0K9 141 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 RTL6Q6ICC9 239 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 C3P1Q6ZMU1 363 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 TMPPEQ6ZT21 453 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 CYP4Z1Q86W10 505 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 P3H2Q8IVL5 708 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 ZDHHC21Q8IVQ6 265 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 RPRMLQ8N4K4 120 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 PIK3C3Q8NEB9 887 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 OR10D3Q8NH80 312 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 OR2V1Q8NHB1 315 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 PRR7Q8TB68 274 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 ZPLD1Q8TCW7 415 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 STK35Q8TDR2 534 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 SLC25A43Q8WUT9 341 aaPredicted RBP7.69□□□□□ -1.18
NUP88-211ENST00000575976 OSTF1Q92882 214 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 POP5Q969H6 163 aaKnown RBP7.69□□□□□ -1.18
NUP88-211ENST00000575976 DDIT4LQ96D03 193 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 ZNF845Q96IR2 970 aaPredicted RBP7.69□□□□□ -1.18
NUP88-211ENST00000575976 TRIB1Q96RU8 372 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 SRXN1Q9BYN0 137 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 POTEKPQ9BYX7 375 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 TP63Q9H3D4 680 aaPredicted RBP7.69□□□□□ -1.18
NUP88-211ENST00000575976 MAGIXQ9H6Y5 334 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 AURKCQ9UQB9 309 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 MED12Q93074 2177 aa7.69□□□□□ -1.18
NUP88-211ENST00000575976 ZNF407Q9C0G0 2248 aa7.68□□□□□ -1.18
NUP88-211ENST00000575976 C2CD3Q4AC94 2353 aa7.68□□□□□ -1.18
NUP88-211ENST00000575976 WDR1O75083 606 aa7.68□□□□□ -1.18
NUP88-211ENST00000575976 NPIPB7O75200 414 aa7.68□□□□□ -1.18
NUP88-211ENST00000575976 AHSA1O95433 338 aa7.68□□□□□ -1.18
NUP88-211ENST00000575976 GPIP06744 558 aa7.68□□□□□ -1.18
NUP88-211ENST00000575976 H1F0P07305 194 aaKnown RBP7.68□□□□□ -1.18
NUP88-211ENST00000575976 RAP2AP10114 183 aa7.68□□□□□ -1.18
NUP88-211ENST00000575976 THRBP10828 461 aa7.68□□□□□ -1.18
NUP88-211ENST00000575976 ITGA2P17301 1181 aa7.68□□□□□ -1.18
NUP88-211ENST00000575976 ACVR2AP27037 513 aa7.68□□□□□ -1.18
NUP88-211ENST00000575976 IDUAP35475 653 aa7.68□□□□□ -1.18
NUP88-211ENST00000575976 MAGEA2P43356 314 aa7.68□□□□□ -1.18
NUP88-211ENST00000575976 CLK1P49759 484 aaKnown RBP7.68□□□□□ -1.18
NUP88-211ENST00000575976 DIO1P49895 249 aa7.68□□□□□ -1.18
NUP88-211ENST00000575976 UGT2B15P54855 530 aa7.68□□□□□ -1.18
NUP88-211ENST00000575976 CASP6P55212 293 aa7.68□□□□□ -1.18
NUP88-211ENST00000575976 CARD18P57730 90 aa7.68□□□□□ -1.18
NUP88-211ENST00000575976 OR2B6P58173 313 aa7.68□□□□□ -1.18
NUP88-211ENST00000575976 LTBQ06643 244 aa7.68□□□□□ -1.18
NUP88-211ENST00000575976 MYBPHQ13203 477 aa7.68□□□□□ -1.18
NUP88-211ENST00000575976 KPNB1Q14974 876 aaKnown RBP7.68□□□□□ -1.18
NUP88-211ENST00000575976 ACSF3Q4G176 576 aaPredicted RBP7.68□□□□□ -1.18
NUP88-211ENST00000575976 PDSS1Q5T2R2 415 aa7.68□□□□□ -1.18
NUP88-211ENST00000575976 C1orf185Q5T7R7 199 aa7.68□□□□□ -1.18
NUP88-211ENST00000575976 C1orf140Q5VVS0 124 aa7.68□□□□□ -1.18
NUP88-211ENST00000575976 TTC33Q6PID6 262 aaPredicted RBP7.68□□□□□ -1.18
NUP88-211ENST00000575976 RPTNQ6XPR3 784 aa7.68□□□□□ -1.18
NUP88-211ENST00000575976 SEM1Q6ZVN7 128 aa7.68□□□□□ -1.18
NUP88-211ENST00000575976 NCCRP1Q6ZVX7 275 aaPredicted RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms