RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 ADRA2CP18825 462 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 CDH2P19022 906 aaPredicted RBP5.09□□□□□ -1.59
SMG6-219ENST00000575663 HSD17B3P37058 310 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 MAGEA4P43358 317 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 KRT6CP48668 564 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 SLC16A1P53985 500 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 CBX1P83916 185 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 HSPB3Q12988 150 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 BAMBIQ13145 260 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 NAB1Q13506 487 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 TAF11Q15544 211 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 FXNQ16595 210 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 C3orf36Q3SXR2 165 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 SYT14P1Q58G82 188 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 SLC25A53Q5H9E4 307 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 ARMCX4Q5H9R4 360 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 SAXO2Q658L1 398 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 BRICD5Q6PL45 260 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 CBLN3Q6UW01 205 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 C1orf229Q6ZS94 237 aaPredicted RBP5.09□□□□□ -1.59
SMG6-219ENST00000575663 TMPPEQ6ZT21 453 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 CCDC80Q76M96 950 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 DOK3Q7L591 496 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 ADGRG3Q86Y34 549 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 GSPT2Q8IYD1 628 aaKnown RBP5.09□□□□□ -1.59
SMG6-219ENST00000575663 CDK20Q8IZL9 346 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 CENPLQ8N0S6 344 aaPredicted RBP5.09□□□□□ -1.59
SMG6-219ENST00000575663 ARFGAP2Q8N6H7 521 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 ARL6IP6Q8N6S5 226 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 SIGLECL1Q8N7X8 197 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 ZNF614Q8N883 585 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 COX18Q8N8Q8 333 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 ZFP28Q8NHY6 868 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 PYROXD1Q8WU10 500 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 GIMAP1Q8WWP7 306 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 JADE3Q92613 823 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 RDH5Q92781 318 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 AMDHD1Q96NU7 426 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 MS4A4EQ96PG1 132 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 DUX5Q96PT3 197 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 KLHDC3Q9BQ90 382 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 ZNF416Q9BWM5 594 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 EBPLQ9BY08 206 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 TRIM31Q9BZY9 425 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 RACGAP1Q9H0H5 632 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 GLIPR2Q9H4G4 154 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 ZNF665Q9H7R5 613 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 ACSS1Q9NUB1 689 aaPredicted RBP5.09□□□□□ -1.59
SMG6-219ENST00000575663 TREM2Q9NZC2 230 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 BLOC1S6Q9UL45 172 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 ICAM5Q9UMF0 924 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 CARD8Q9Y2G2 431 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 ALPK2Q86TB3 2170 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 PRR14LQ5THK1 2151 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 TCRBV9S1A1TA0A576 114 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 FAM159BA6NKW6 160 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 FAM25EA8MYX2 175 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 C3orf80F5H4A9 247 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 LYNX1G3V0Z9 82 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 ETV2O00321 342 aaPredicted RBP5.08□□□□□ -1.6
SMG6-219ENST00000575663 PDPK1O15530 556 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 RIPK2O43353 540 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 SYNGR3O43761 229 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 SMIM24O75264 130 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 MTRF1O75570 445 aaKnown RBP5.08□□□□□ -1.6
SMG6-219ENST00000575663 KRT33AO76009 404 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 KLHL2O95198 593 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 AVPP01185 164 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 HNRNPCP07910 306 aaKnown RBP eCLIP5.08□□□□□ -1.6
SMG6-219ENST00000575663 ADRA2AP08913 450 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 ANXA4P09525 319 aaPredicted RBP5.08□□□□□ -1.6
SMG6-219ENST00000575663 ALOX5P09917 674 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 FAM153BP0C7A2 387 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 CECR9P0C854 216 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 LYNX1P0DP58 116 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 TFPIP10646 304 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 UBL4AP11441 157 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 MDKP21741 143 aaPredicted RBP5.08□□□□□ -1.6
SMG6-219ENST00000575663 HMOX2P30519 316 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 SSTR1P30872 391 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 THBS4P35443 961 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 SLC18A1P54219 525 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 PRKAG1P54619 331 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 FOXG1P55316 489 aaPredicted RBP5.08□□□□□ -1.6
SMG6-219ENST00000575663 TMEM33P57088 247 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 RAE1P78406 368 aaKnown RBP5.08□□□□□ -1.6
SMG6-219ENST00000575663 POU6F2P78424 691 aaPredicted RBP5.08□□□□□ -1.6
SMG6-219ENST00000575663 MRPS11P82912 194 aaKnown RBP5.08□□□□□ -1.6
SMG6-219ENST00000575663 IFFO1Q0D2I5 559 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 C2orf80Q0P641 193 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 QPRTQ15274 297 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 TRADDQ15628 312 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 TOMM34Q15785 309 aaPredicted RBP5.08□□□□□ -1.6
SMG6-219ENST00000575663 FAM153CQ494X1 144 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 TIGD2Q4W5G0 525 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 HIKESHIQ53FT3 197 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 TECRLQ5HYJ1 363 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 ELFN2Q5R3F8 820 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 OTUD3Q5T2D3 398 aaPredicted RBP5.08□□□□□ -1.6
SMG6-219ENST00000575663 AGBL2Q5U5Z8 902 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms