RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 DUSP16Q9BY84 665 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 TRIM4Q9C037 500 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 LAT2Q9GZY6 243 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 SHARPINQ9H0F6 387 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 SLC25A51Q9H1U9 297 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 S100A14Q9HCY8 104 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 ZNF275Q9NSD4 429 aaPredicted RBP4.32□□□□□ -1.72
TSR1-203ENST00000575049 WWOXQ9NZC7 414 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 KLRF1Q9NZS2 232 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 MBD2Q9UBB5 411 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 TRMT112Q9UI30 125 aaKnown RBP4.32□□□□□ -1.72
TSR1-203ENST00000575049 SIX4Q9UIU6 781 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 ANAPC7Q9UJX3 599 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 TMCO1Q9UM00 188 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 NPIPA1Q9UND3 350 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 SLC22A14Q9Y267 594 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 SNX24Q9Y343 169 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 STARD10Q9Y365 291 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 COL18A1P39060 1754 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 DCCP43146 1447 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 TAF1P21675 1872 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 ADGRA3Q8IWK6 1321 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 GSTTP1A0A1W2PQM5 241 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 SMCO2A6NFE2 343 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 OR6C65A6NJZ3 312 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 SOCS2O14508 198 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 FPGTO14772 594 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 CLOCKO15516 846 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 B4GAT1O43505 415 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 CYTH3O43739 400 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 CALUO43852 315 aaPredicted RBP4.31□□□□□ -1.72
TSR1-203ENST00000575049 EDIL3O43854 480 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 EFNA2O43921 213 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 KCNJ13O60928 360 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 NDUFS6O75380 124 aaKnown RBP4.31□□□□□ -1.72
TSR1-203ENST00000575049 CRTAPO75718 401 aaPredicted RBP4.31□□□□□ -1.72
TSR1-203ENST00000575049 TOXO94900 526 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 CLDN9O95484 217 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 TTC4O95801 387 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 T-ENOLP0DO92 83 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 AOC1P19801 751 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 CCNOP22674 350 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 MARK3P27448 753 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 CD1CP29017 333 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 GTF2E2P29084 291 aaKnown RBP4.31□□□□□ -1.72
TSR1-203ENST00000575049 OXTRP30559 389 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 YWHABP31946 246 aaKnown RBP4.31□□□□□ -1.72
TSR1-203ENST00000575049 COILP38432 576 aaPredicted RBP4.31□□□□□ -1.72
TSR1-203ENST00000575049 UQCRFS1P47985 274 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 DUSP3P51452 185 aaPredicted RBP4.31□□□□□ -1.72
TSR1-203ENST00000575049 NOVA1P51513 510 aaKnown RBP4.31□□□□□ -1.72
TSR1-203ENST00000575049 MLLT10P55197 1068 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 OR1D5P58170 312 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 IL9RQ01113 521 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 GTF2H2Q13888 395 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 GPR18Q14330 331 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 ATXN7L3Q14CW9 347 aaPredicted RBP4.31□□□□□ -1.72
TSR1-203ENST00000575049 FASTKD3Q14CZ7 662 aaKnown RBP4.31□□□□□ -1.72
TSR1-203ENST00000575049 CALCRLQ16602 461 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 SNAI3Q3KNW1 292 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 C6orf183Q5T699 404 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 GTF2H2CQ6P1K8 395 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 Q6ZRG5 221 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 ASB18Q6ZVZ8 466 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 MOB3BQ86TA1 216 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 UBL4BQ8N7F7 174 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 NRACQ8N912 160 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 OR51L1Q8NGJ5 315 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 OR9G4Q8NGQ1 327 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 LNX1Q8TBB1 728 aaPredicted RBP4.31□□□□□ -1.72
TSR1-203ENST00000575049 FAM110BQ8TC76 370 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 TBCKQ8TEA7 893 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 BADQ92934 168 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 TXNDC15Q96J42 360 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 ZNF578Q96N58 590 aaPredicted RBP4.31□□□□□ -1.72
TSR1-203ENST00000575049 MBOAT4Q96T53 435 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 SLC29A1Q99808 456 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 SH3GL1Q99961 368 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 NEURL2Q9BR09 285 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 PITPNM3Q9BZ71 974 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 ILKAPQ9H0C8 392 aaPredicted RBP4.31□□□□□ -1.72
TSR1-203ENST00000575049 FAM49AQ9H0Q0 323 aaPredicted RBP4.31□□□□□ -1.72
TSR1-203ENST00000575049 VCX3BQ9H321 246 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 GOLPH3Q9H4A6 298 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 RANBP3Q9H6Z4 567 aaPredicted RBP4.31□□□□□ -1.72
TSR1-203ENST00000575049 LRRC19Q9H756 370 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 SLC25A19Q9HC21 320 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 VCX3AQ9NNX9 186 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 NT5MQ9NPB1 228 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 CCNB1IP1Q9NPC3 277 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 MYOZ2Q9NPC6 264 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 ZNF302Q9NR11 478 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 SLC17A5Q9NRA2 495 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 LYARQ9NX58 379 aaKnown RBP4.31□□□□□ -1.72
TSR1-203ENST00000575049 EURLQ9NYK6 297 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 NKIRAS1Q9NYS0 192 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 IL36GQ9NZH8 169 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 PHF11Q9UIL8 331 aa4.31□□□□□ -1.72
TSR1-203ENST00000575049 RBMX2Q9Y388 322 aaKnown RBP4.31□□□□□ -1.72
TSR1-203ENST00000575049 MYH8P13535 1937 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms