RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-223ENST00000573895 CLCF1Q9UBD9 225 aa12.95□□□□□ -0.34
ABR-223ENST00000573895 STOML1Q9UBI4 398 aa12.95□□□□□ -0.34
ABR-223ENST00000573895 FOXD3Q9UJU5 478 aaPredicted RBP12.95□□□□□ -0.34
ABR-223ENST00000573895 RPH3AQ9Y2J0 694 aaPredicted RBP12.95□□□□□ -0.34
ABR-223ENST00000573895 CHST2Q9Y4C5 530 aa12.95□□□□□ -0.34
ABR-223ENST00000573895 V9GYQ6 96 aa12.95□□□□□ -0.34
ABR-223ENST00000573895 HEATR5AQ86XA9 2040 aa12.95□□□□□ -0.34
ABR-223ENST00000573895 MPDZO75970 2070 aa12.94□□□□□ -0.34
ABR-223ENST00000573895 OR2M5A3KFT3 312 aa12.94□□□□□ -0.34
ABR-223ENST00000573895 C7orf72A4D263 438 aa12.94□□□□□ -0.34
ABR-223ENST00000573895 CLCA1A8K7I4 914 aa12.94□□□□□ -0.34
ABR-223ENST00000573895 KDM4EB2RXH2 506 aaPredicted RBP12.94□□□□□ -0.34
ABR-223ENST00000573895 ZNF264O43296 627 aa12.94□□□□□ -0.34
ABR-223ENST00000573895 FMO6PO60774 539 aa12.94□□□□□ -0.34
ABR-223ENST00000573895 DEAF1O75398 565 aaPredicted RBP12.94□□□□□ -0.34
ABR-223ENST00000573895 RCBTB2O95199 551 aa12.94□□□□□ -0.34
ABR-223ENST00000573895 RHCEP18577 417 aa12.94□□□□□ -0.34
ABR-223ENST00000573895 IFNA8P32881 189 aa12.94□□□□□ -0.34
ABR-223ENST00000573895 STARP49675 285 aa12.94□□□□□ -0.34
ABR-223ENST00000573895 ASCL1P50553 236 aa12.94□□□□□ -0.34
ABR-223ENST00000573895 SMIM11AP58511 58 aa12.94□□□□□ -0.34
ABR-223ENST00000573895 SRYQ05066 204 aa12.94□□□□□ -0.34
ABR-223ENST00000573895 GLIPR1L2Q4G1C9 344 aa12.94□□□□□ -0.34
ABR-223ENST00000573895 RAET1LQ5VY80 246 aa12.94□□□□□ -0.34
ABR-223ENST00000573895 HMGN2P46Q86SG4 172 aa12.94□□□□□ -0.34
ABR-223ENST00000573895 MEIOBQ8N635 442 aa12.94□□□□□ -0.34
ABR-223ENST00000573895 TOR1AIP2Q8NFQ8 470 aa12.94□□□□□ -0.34
ABR-223ENST00000573895 PHOSPHO1Q8TCT1 267 aa12.94□□□□□ -0.34
ABR-223ENST00000573895 ZBTB8AQ96BR9 441 aa12.94□□□□□ -0.34
ABR-223ENST00000573895 ZNF300Q96RE9 604 aaPredicted RBP12.94□□□□□ -0.34
ABR-223ENST00000573895 AMBRA1Q9C0C7 1298 aa12.94□□□□□ -0.34
ABR-223ENST00000573895 POLR2J2Q9GZM3 115 aaKnown RBP12.94□□□□□ -0.34
ABR-223ENST00000573895 LAT2Q9GZY6 243 aa12.94□□□□□ -0.34
ABR-223ENST00000573895 POLR2J3Q9H1A7 115 aaKnown RBP12.94□□□□□ -0.34
ABR-223ENST00000573895 RNPEPL1Q9HAU8 725 aa12.94□□□□□ -0.34
ABR-223ENST00000573895 RLIMQ9NVW2 624 aa12.94□□□□□ -0.34
ABR-223ENST00000573895 NDUFAF4Q9P032 175 aa12.94□□□□□ -0.34
ABR-223ENST00000573895 DNAJB9Q9UBS3 223 aa12.94□□□□□ -0.34
ABR-223ENST00000573895 KCNN3Q9UGI6 736 aa12.94□□□□□ -0.34
ABR-223ENST00000573895 ZNF337Q9Y3M9 751 aa12.94□□□□□ -0.34
ABR-223ENST00000573895 AP4B1Q9Y6B7 739 aa12.94□□□□□ -0.34
ABR-223ENST00000573895 ENPP4Q9Y6X5 453 aa12.94□□□□□ -0.34
ABR-223ENST00000573895 CENPVL1A0A0U1RR11 272 aa12.93□□□□□ -0.34
ABR-223ENST00000573895 AP3D1O14617 1153 aa12.93□□□□□ -0.34
ABR-223ENST00000573895 CLOCKO15516 846 aa12.93□□□□□ -0.34
ABR-223ENST00000573895 ATP6V1G2O95670 118 aa12.93□□□□□ -0.34
ABR-223ENST00000573895 BAG2O95816 211 aa12.93□□□□□ -0.34
ABR-223ENST00000573895 UBL4AP11441 157 aa12.93□□□□□ -0.34
ABR-223ENST00000573895 ANPEPP15144 967 aa12.93□□□□□ -0.34
ABR-223ENST00000573895 POU3F2P20265 443 aaPredicted RBP12.93□□□□□ -0.34
ABR-223ENST00000573895 BMP5P22003 454 aa12.93□□□□□ -0.34
ABR-223ENST00000573895 OR1E2P47887 323 aa12.93□□□□□ -0.34
ABR-223ENST00000573895 SLC6A8P48029 635 aa12.93□□□□□ -0.34
ABR-223ENST00000573895 RGS8P57771 180 aaPredicted RBP12.93□□□□□ -0.34
ABR-223ENST00000573895 VLDLRP98155 873 aa12.93□□□□□ -0.34
ABR-223ENST00000573895 GK3PQ14409 553 aa12.93□□□□□ -0.34
ABR-223ENST00000573895 RCN1Q15293 331 aa12.93□□□□□ -0.34
ABR-223ENST00000573895 ATP6AP1Q15904 470 aa12.93□□□□□ -0.34
ABR-223ENST00000573895 IQCCQ4KMZ1 466 aa12.93□□□□□ -0.34
ABR-223ENST00000573895 CHMP1BQ7LBR1 199 aa12.93□□□□□ -0.34
ABR-223ENST00000573895 RANBP3LQ86VV4 465 aaPredicted RBP12.93□□□□□ -0.34
ABR-223ENST00000573895 PQLC1Q8N2U9 271 aa12.93□□□□□ -0.34
ABR-223ENST00000573895 GTPBP8Q8N3Z3 284 aaPredicted RBP12.93□□□□□ -0.34
ABR-223ENST00000573895 C9orf106Q8NAJ2 232 aa12.93□□□□□ -0.34
ABR-223ENST00000573895 RELL2Q8NC24 303 aaPredicted RBP12.93□□□□□ -0.34
ABR-223ENST00000573895 FAM71CQ8NEG0 241 aa12.93□□□□□ -0.34
ABR-223ENST00000573895 CNOT9Q92600 299 aaKnown RBP12.93□□□□□ -0.34
ABR-223ENST00000573895 CENPNQ96H22 339 aaPredicted RBP12.93□□□□□ -0.34
ABR-223ENST00000573895 ZNF559Q9BR84 538 aa12.93□□□□□ -0.34
ABR-223ENST00000573895 BDH2Q9BUT1 245 aa12.93□□□□□ -0.34
ABR-223ENST00000573895 SFXN3Q9BWM7 321 aa12.93□□□□□ -0.34
ABR-223ENST00000573895 JKAMPQ9P055 326 aa12.93□□□□□ -0.34
ABR-223ENST00000573895 CSMD2Q7Z408 3487 aa12.93□□□□□ -0.34
ABR-223ENST00000573895 SPG11Q96JI7 2443 aa12.93□□□□□ -0.34
ABR-223ENST00000573895 OTOGQ6ZRI0 2925 aa12.92□□□□□ -0.34
ABR-223ENST00000573895 CLDN24A6NM45 220 aa12.92□□□□□ -0.34
ABR-223ENST00000573895 TIPRLO75663 272 aa12.92□□□□□ -0.34
ABR-223ENST00000573895 CST1P01037 141 aa12.92□□□□□ -0.34
ABR-223ENST00000573895 CRHP06850 196 aa12.92□□□□□ -0.34
ABR-223ENST00000573895 TMIGD3P0DMS9 266 aaPredicted RBP12.92□□□□□ -0.34
ABR-223ENST00000573895 UQCRBP14927 111 aa12.92□□□□□ -0.34
ABR-223ENST00000573895 SUMO3P55854 103 aaPredicted RBP12.92□□□□□ -0.34
ABR-223ENST00000573895 SLC34A1Q06495 639 aa12.92□□□□□ -0.34
ABR-223ENST00000573895 OR2T5Q6IEZ7 315 aa12.92□□□□□ -0.34
ABR-223ENST00000573895 OR2A2Q6IF42 318 aa12.92□□□□□ -0.34
ABR-223ENST00000573895 ARSKQ6UWY0 536 aa12.92□□□□□ -0.34
ABR-223ENST00000573895 OR6T1Q8NGN1 323 aa12.92□□□□□ -0.34
ABR-223ENST00000573895 OR2T29Q8NH02 315 aa12.92□□□□□ -0.34
ABR-223ENST00000573895 B4GALNT2Q8NHY0 566 aa12.92□□□□□ -0.34
ABR-223ENST00000573895 RNASE6Q93091 150 aaKnown RBP12.92□□□□□ -0.34
ABR-223ENST00000573895 MCHR1Q99705 422 aa12.92□□□□□ -0.34
ABR-223ENST00000573895 PIP5K1AQ99755 562 aa12.92□□□□□ -0.34
ABR-223ENST00000573895 TRIM2Q9C040 744 aa12.92□□□□□ -0.34
ABR-223ENST00000573895 MCCC2Q9HCC0 563 aa12.92□□□□□ -0.34
ABR-223ENST00000573895 DNAJB12Q9NXW2 375 aaKnown RBP12.92□□□□□ -0.34
ABR-223ENST00000573895 TESQ9UGI8 421 aaKnown RBP12.92□□□□□ -0.34
ABR-223ENST00000573895 hCG_2039718K7EN88 272 aa12.91□□□□□ -0.34
ABR-223ENST00000573895 M0R3H8 397 aa12.91□□□□□ -0.34
ABR-223ENST00000573895 FAAHO00519 579 aa12.91□□□□□ -0.34
ABR-223ENST00000573895 GNGT2O14610 69 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms