RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 GBX2P52951 348 aaPredicted RBP17.55■□□□□ 0.4
SCARF1-206ENST00000573852 HSF2Q03933 536 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 TMEM255AQ5JRV8 349 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 ARHGAP11AQ6P4F7 1023 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 FGD2Q7Z6J4 655 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 UBE2Q1Q7Z7E8 422 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 ZNF527Q8NB42 609 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 FAM98AQ8NCA5 519 aaKnown RBP17.55■□□□□ 0.4
SCARF1-206ENST00000573852 ZNRF4Q8WWF5 429 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 STACQ99469 402 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 C20orf85Q9H1P6 137 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 A0A087WV62 115 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 TRBV2A0A0J9YWF9 115 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 RPS10-NUDT3A0A1W2PQS6 291 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 SCO1O75880 301 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 IFNGP01579 166 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 ATP1B1P05026 303 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 MAP3K8P41279 467 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 POU6F2P78424 691 aaPredicted RBP17.55■□□□□ 0.4
SCARF1-206ENST00000573852 MGAT2Q10469 447 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 SNTA1Q13424 505 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 RUNX3Q13761 415 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 ZSWIM7Q19AV6 140 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 NXPE2Q96DL1 559 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 SLC6A17Q9H1V8 727 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 ANKRD10Q9NXR5 420 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 SCP2D1Q9UJQ7 156 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 SERTAD3Q9UJW9 196 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 ICAM5Q9UMF0 924 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 PRSS38A1L453 326 aa17.54■□□□□ 0.4
SCARF1-206ENST00000573852 CTDSPLO15194 276 aa17.54■□□□□ 0.4
SCARF1-206ENST00000573852 TOXO94900 526 aa17.54■□□□□ 0.4
SCARF1-206ENST00000573852 ZNF250P15622 560 aa17.54■□□□□ 0.4
SCARF1-206ENST00000573852 M6PRP20645 277 aa17.54■□□□□ 0.4
SCARF1-206ENST00000573852 PSMB10P40306 273 aa17.54■□□□□ 0.4
SCARF1-206ENST00000573852 EMDP50402 254 aa17.54■□□□□ 0.4
SCARF1-206ENST00000573852 PRICKLE4Q2TBC4 344 aa17.54■□□□□ 0.4
SCARF1-206ENST00000573852 FCRL6Q6DN72 434 aa17.54■□□□□ 0.4
SCARF1-206ENST00000573852 OVCH1Q7RTY7 1134 aa17.54■□□□□ 0.4
SCARF1-206ENST00000573852 OR11G2Q8NGC1 345 aa17.54■□□□□ 0.4
SCARF1-206ENST00000573852 OR5T3Q8NGG3 340 aa17.54■□□□□ 0.4
SCARF1-206ENST00000573852 CCL4L1Q8NHW4 92 aa17.54■□□□□ 0.4
SCARF1-206ENST00000573852 OR2M4Q96R27 311 aa17.54■□□□□ 0.4
SCARF1-206ENST00000573852 ZNF426Q9BUY5 554 aa17.54■□□□□ 0.4
SCARF1-206ENST00000573852 SPRTNQ9H040 489 aaPredicted RBP17.54■□□□□ 0.4
SCARF1-206ENST00000573852 NRIP3Q9NQ35 241 aa17.54■□□□□ 0.4
SCARF1-206ENST00000573852 CHRNA9Q9UGM1 479 aa17.54■□□□□ 0.4
SCARF1-206ENST00000573852 DPP7Q9UHL4 492 aa17.54■□□□□ 0.4
SCARF1-206ENST00000573852 GNG8Q9UK08 70 aa17.54■□□□□ 0.4
SCARF1-206ENST00000573852 C2orf16Q68DN1 1984 aa17.54■□□□□ 0.4
SCARF1-206ENST00000573852 OR2T7P0C7T2 308 aa17.54■□□□□ 0.4
SCARF1-206ENST00000573852 FCARP24071 287 aa17.54■□□□□ 0.4
SCARF1-206ENST00000573852 CRYZQ08257 329 aaKnown RBP17.54■□□□□ 0.4
SCARF1-206ENST00000573852 UBE2NLQ5JXB2 153 aa17.54■□□□□ 0.4
SCARF1-206ENST00000573852 BAIAP2L2Q6UXY1 529 aa17.54■□□□□ 0.4
SCARF1-206ENST00000573852 NLRC3Q7RTR2 1065 aa17.54■□□□□ 0.4
SCARF1-206ENST00000573852 SYS1Q8N2H4 156 aa17.54■□□□□ 0.4
SCARF1-206ENST00000573852 OR2T27Q8NH04 317 aa17.54■□□□□ 0.4
SCARF1-206ENST00000573852 SNX33Q8WV41 574 aa17.54■□□□□ 0.4
SCARF1-206ENST00000573852 SCARF2Q96GP6 870 aaPredicted RBP17.54■□□□□ 0.4
SCARF1-206ENST00000573852 CNN2Q99439 309 aaKnown RBP17.54■□□□□ 0.4
SCARF1-206ENST00000573852 GFI1Q99684 422 aa17.54■□□□□ 0.4
SCARF1-206ENST00000573852 ARPC5LQ9BPX5 153 aa17.54■□□□□ 0.4
SCARF1-206ENST00000573852 ACTR6Q9GZN1 396 aa17.54■□□□□ 0.4
SCARF1-206ENST00000573852 C14orf105Q9NVL8 296 aa17.54■□□□□ 0.4
SCARF1-206ENST00000573852 USP34Q70CQ2 3546 aa17.53■□□□□ 0.4
SCARF1-206ENST00000573852 IMPA2O14732 288 aa17.53■□□□□ 0.4
SCARF1-206ENST00000573852 GNB5O14775 395 aa17.53■□□□□ 0.4
SCARF1-206ENST00000573852 PEX14O75381 377 aa17.53■□□□□ 0.4
SCARF1-206ENST00000573852 CFDP00746 253 aaPredicted RBP17.53■□□□□ 0.4
SCARF1-206ENST00000573852 EDNRAP25101 427 aa17.53■□□□□ 0.4
SCARF1-206ENST00000573852 ACAA2P42765 397 aaKnown RBP17.53■□□□□ 0.4
SCARF1-206ENST00000573852 CDONQ4KMG0 1287 aa17.53■□□□□ 0.4
SCARF1-206ENST00000573852 HES5Q5TA89 166 aa17.53■□□□□ 0.4
SCARF1-206ENST00000573852 IDO2Q6ZQW0 420 aa17.53■□□□□ 0.4
SCARF1-206ENST00000573852 Q6ZTK2 550 aa17.53■□□□□ 0.4
SCARF1-206ENST00000573852 LINGO2Q7L985 606 aa17.53■□□□□ 0.4
SCARF1-206ENST00000573852 RD3Q7Z3Z2 195 aa17.53■□□□□ 0.4
SCARF1-206ENST00000573852 SLC35F2Q8IXU6 374 aa17.53■□□□□ 0.4
SCARF1-206ENST00000573852 OR2T35Q8NGX2 323 aa17.53■□□□□ 0.4
SCARF1-206ENST00000573852 RBP7Q96R05 134 aa17.53■□□□□ 0.4
SCARF1-206ENST00000573852 ZNF436Q9C0F3 470 aaPredicted RBP17.53■□□□□ 0.4
SCARF1-206ENST00000573852 METTL17Q9H7H0 456 aaPredicted RBP17.53■□□□□ 0.4
SCARF1-206ENST00000573852 EVA1BQ9NVM1 165 aa17.53■□□□□ 0.4
SCARF1-206ENST00000573852 KCNN3Q9UGI6 736 aa17.53■□□□□ 0.4
SCARF1-206ENST00000573852 COPS3Q9UNS2 423 aa17.53■□□□□ 0.4
SCARF1-206ENST00000573852 RCE1Q9Y256 329 aa17.53■□□□□ 0.4
SCARF1-206ENST00000573852 NPTNQ9Y639 398 aa17.53■□□□□ 0.4
SCARF1-206ENST00000573852 I3L521 148 aa17.53■□□□□ 0.4
SCARF1-206ENST00000573852 PIN1P1O15428 100 aa17.53■□□□□ 0.4
SCARF1-206ENST00000573852 GATBO75879 557 aaKnown RBP17.53■□□□□ 0.4
SCARF1-206ENST00000573852 POU2F2P09086 479 aa17.53■□□□□ 0.4
SCARF1-206ENST00000573852 CCR9P51686 369 aa17.53■□□□□ 0.4
SCARF1-206ENST00000573852 ACTA2P62736 377 aa17.53■□□□□ 0.4
SCARF1-206ENST00000573852 ACTG2P63267 376 aa17.53■□□□□ 0.4
SCARF1-206ENST00000573852 PUDPQ08623 228 aa17.53■□□□□ 0.4
SCARF1-206ENST00000573852 FAM199XQ6PEV8 388 aaPredicted RBP17.53■□□□□ 0.4
SCARF1-206ENST00000573852 CEP76Q8TAP6 659 aa17.53■□□□□ 0.4
SCARF1-206ENST00000573852 CCDC120Q96HB5 630 aa17.53■□□□□ 0.4
SCARF1-206ENST00000573852 MFRPQ9BY79 579 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms