RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 RPS26P11Q5JNZ5 115 aaPredicted RBP15.33■□□□□ 0.04
SMG6-212ENST00000573153 SFRP5Q5T4F7 317 aa15.33■□□□□ 0.04
SMG6-212ENST00000573153 ZNF836Q6ZNA1 936 aa15.33■□□□□ 0.04
SMG6-212ENST00000573153 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.33■□□□□ 0.04
SMG6-212ENST00000573153 VRK2Q86Y07 508 aa15.33■□□□□ 0.04
SMG6-212ENST00000573153 OR52P1PQ8NH57 321 aa15.33■□□□□ 0.04
SMG6-212ENST00000573153 SLC35B4Q969S0 331 aa15.33■□□□□ 0.04
SMG6-212ENST00000573153 TMEM19Q96HH6 336 aa15.33■□□□□ 0.04
SMG6-212ENST00000573153 ADAM19Q9H013 955 aa15.33■□□□□ 0.04
SMG6-212ENST00000573153 RABEP2Q9H5N1 569 aa15.33■□□□□ 0.04
SMG6-212ENST00000573153 ZNF385DQ9H6B1 395 aa15.33■□□□□ 0.04
SMG6-212ENST00000573153 RLIMQ9NVW2 624 aa15.33■□□□□ 0.04
SMG6-212ENST00000573153 CCDC167Q9P0B6 97 aa15.33■□□□□ 0.04
SMG6-212ENST00000573153 TRAPPC4Q9Y296 219 aa15.33■□□□□ 0.04
SMG6-212ENST00000573153 ROS1P08922 2347 aa15.33■□□□□ 0.04
SMG6-212ENST00000573153 TMEM72A0PK05 275 aa15.32■□□□□ 0.04
SMG6-212ENST00000573153 ZC3H12DA2A288 527 aaKnown RBP15.32■□□□□ 0.04
SMG6-212ENST00000573153 TMEM247A6NEH6 219 aa15.32■□□□□ 0.04
SMG6-212ENST00000573153 SULT2B1O00204 365 aa15.32■□□□□ 0.04
SMG6-212ENST00000573153 UQCRBP14927 111 aa15.32■□□□□ 0.04
SMG6-212ENST00000573153 PPIBP23284 216 aaKnown RBP15.32■□□□□ 0.04
SMG6-212ENST00000573153 POLR2HP52434 150 aaKnown RBP15.32■□□□□ 0.04
SMG6-212ENST00000573153 SLC16A1P53985 500 aa15.32■□□□□ 0.04
SMG6-212ENST00000573153 RASGEF1BQ0VAM2 473 aa15.32■□□□□ 0.04
SMG6-212ENST00000573153 TAB1Q15750 504 aa15.32■□□□□ 0.04
SMG6-212ENST00000573153 MTDHQ86UE4 582 aaKnown RBP15.32■□□□□ 0.04
SMG6-212ENST00000573153 DNAJA3Q96EY1 480 aa15.32■□□□□ 0.04
SMG6-212ENST00000573153 HDHD5Q9BXW7 423 aa15.32■□□□□ 0.04
SMG6-212ENST00000573153 SLAMF8Q9P0V8 285 aa15.32■□□□□ 0.04
SMG6-212ENST00000573153 ZNF443Q9Y2A4 671 aaPredicted RBP15.32■□□□□ 0.04
SMG6-212ENST00000573153 IFT52Q9Y366 437 aa15.32■□□□□ 0.04
SMG6-212ENST00000573153 UQCRHLA0A096LP55 91 aa15.31■□□□□ 0.04
SMG6-212ENST00000573153 TMED7-TICAM2A0A0A6YYA0 188 aa15.31■□□□□ 0.04
SMG6-212ENST00000573153 A0A1W2PP18 115 aa15.31■□□□□ 0.04
SMG6-212ENST00000573153 NR5A2O00482 541 aa15.31■□□□□ 0.04
SMG6-212ENST00000573153 CNOT4O95628 575 aaKnown RBP15.31■□□□□ 0.04
SMG6-212ENST00000573153 ADAP00813 363 aa15.31■□□□□ 0.04
SMG6-212ENST00000573153 LARS2Q15031 903 aaKnown RBP15.31■□□□□ 0.04
SMG6-212ENST00000573153 PAGE3Q5JUK9 113 aa15.31■□□□□ 0.04
SMG6-212ENST00000573153 ZNF704Q6ZNC4 412 aaPredicted RBP15.31■□□□□ 0.04
SMG6-212ENST00000573153 Q6ZT83 130 aa15.31■□□□□ 0.04
SMG6-212ENST00000573153 COMTD1Q86VU5 262 aa15.31■□□□□ 0.04
SMG6-212ENST00000573153 CLIP4Q8N3C7 705 aa15.31■□□□□ 0.04
SMG6-212ENST00000573153 BBS10Q8TAM1 723 aa15.31■□□□□ 0.04
SMG6-212ENST00000573153 ZNF775Q96BV0 537 aaPredicted RBP15.31■□□□□ 0.04
SMG6-212ENST00000573153 SPATA9Q9BWV2 254 aa15.31■□□□□ 0.04
SMG6-212ENST00000573153 GSX1Q9H4S2 264 aaPredicted RBP15.31■□□□□ 0.04
SMG6-212ENST00000573153 VAPAQ9P0L0 249 aa15.31■□□□□ 0.04
SMG6-212ENST00000573153 TMED7Q9Y3B3 224 aa15.31■□□□□ 0.04
SMG6-212ENST00000573153 PRG2P13727 222 aa15.3■□□□□ 0.04
SMG6-212ENST00000573153 ETS2P15036 469 aa15.3■□□□□ 0.04
SMG6-212ENST00000573153 IGHV1-2P23083 117 aa15.3■□□□□ 0.04
SMG6-212ENST00000573153 TACR3P29371 465 aa15.3■□□□□ 0.04
SMG6-212ENST00000573153 FOXG1P55316 489 aaPredicted RBP15.3■□□□□ 0.04
SMG6-212ENST00000573153 P2RY6Q15077 328 aa15.3■□□□□ 0.04
SMG6-212ENST00000573153 AGKQ53H12 422 aa15.3■□□□□ 0.04
SMG6-212ENST00000573153 WFDC8Q8IUA0 241 aa15.3■□□□□ 0.04
SMG6-212ENST00000573153 CCDC103Q8IW40 242 aa15.3■□□□□ 0.04
SMG6-212ENST00000573153 LRRC75A-AS1Q8N1F1 130 aa15.3■□□□□ 0.04
SMG6-212ENST00000573153 STEAP2Q8NFT2 490 aa15.3■□□□□ 0.04
SMG6-212ENST00000573153 TSPEARQ8WU66 669 aa15.3■□□□□ 0.04
SMG6-212ENST00000573153 ZHX1-C8orf76Q96EF9 292 aa15.3■□□□□ 0.04
SMG6-212ENST00000573153 PLPPR2Q96GM1 343 aa15.3■□□□□ 0.04
SMG6-212ENST00000573153 USB1Q9BQ65 265 aaKnown RBP15.3■□□□□ 0.04
SMG6-212ENST00000573153 IKZF5Q9H5V7 419 aa15.3■□□□□ 0.04
SMG6-212ENST00000573153 ARMC7Q9H6L4 198 aa15.3■□□□□ 0.04
SMG6-212ENST00000573153 UBTD1Q9HAC8 227 aa15.3■□□□□ 0.04
SMG6-212ENST00000573153 TMEM181Q9P2C4 612 aa15.3■□□□□ 0.04
SMG6-212ENST00000573153 ZNF232Q9UNY5 417 aa15.3■□□□□ 0.04
SMG6-212ENST00000573153 TRIM33Q9UPN9 1127 aa15.3■□□□□ 0.04
SMG6-212ENST00000573153 CORO2BQ9UQ03 480 aa15.3■□□□□ 0.04
SMG6-212ENST00000573153 DSCAMO60469 2012 aa15.29■□□□□ 0.04
SMG6-212ENST00000573153 PDLIM1O00151 329 aa15.29■□□□□ 0.04
SMG6-212ENST00000573153 PGM3O95394 542 aa15.29■□□□□ 0.04
SMG6-212ENST00000573153 GKN3PP0CG01 181 aa15.29■□□□□ 0.04
SMG6-212ENST00000573153 ARAFP10398 606 aa15.29■□□□□ 0.04
SMG6-212ENST00000573153 TFPIP10646 304 aa15.29■□□□□ 0.04
SMG6-212ENST00000573153 PAX1P15863 534 aa15.29■□□□□ 0.04
SMG6-212ENST00000573153 GPX2P18283 190 aa15.29■□□□□ 0.04
SMG6-212ENST00000573153 P2RY4P51582 365 aa15.29■□□□□ 0.04
SMG6-212ENST00000573153 ITGADQ13349 1161 aa15.29■□□□□ 0.04
SMG6-212ENST00000573153 METTL21CQ5VZV1 264 aa15.29■□□□□ 0.04
SMG6-212ENST00000573153 WBP2NLQ6ICG8 309 aa15.29■□□□□ 0.04
SMG6-212ENST00000573153 DLEU7Q6UYE1 221 aa15.29■□□□□ 0.04
SMG6-212ENST00000573153 DPP10Q8N608 796 aa15.29■□□□□ 0.04
SMG6-212ENST00000573153 PIGXQ8TBF5 258 aa15.29■□□□□ 0.04
SMG6-212ENST00000573153 DDIT4LQ96D03 193 aa15.29■□□□□ 0.04
SMG6-212ENST00000573153 POTEKPQ9BYX7 375 aa15.29■□□□□ 0.04
SMG6-212ENST00000573153 TMEM38AQ9H6F2 299 aa15.29■□□□□ 0.04
SMG6-212ENST00000573153 ZNF446Q9NWS9 450 aa15.29■□□□□ 0.04
SMG6-212ENST00000573153 NPAP1Q9NZP6 1156 aa15.29■□□□□ 0.04
SMG6-212ENST00000573153 EMC3Q9P0I2 261 aa15.29■□□□□ 0.04
SMG6-212ENST00000573153 ANK3Q12955 4377 aaKnown RBP15.29■□□□□ 0.04
SMG6-212ENST00000573153 EIF1BO60739 113 aaKnown RBP15.28■□□□□ 0.04
SMG6-212ENST00000573153 FZD7O75084 574 aa15.28■□□□□ 0.04
SMG6-212ENST00000573153 NPIPB7O75200 414 aa15.28■□□□□ 0.04
SMG6-212ENST00000573153 LYZL6O75951 148 aa15.28■□□□□ 0.04
SMG6-212ENST00000573153 PRKAR1BP31321 381 aa15.28■□□□□ 0.04
SMG6-212ENST00000573153 NKX6-1P78426 367 aaPredicted RBP15.28■□□□□ 0.04
SMG6-212ENST00000573153 NCMAPQ5T1S8 102 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms