RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.64□□□□□ -1.35
NUP88-205ENST00000572809 CCM2LQ9NUG4 571 aaPredicted RBP6.64□□□□□ -1.35
NUP88-205ENST00000572809 ZNF226Q9NYT6 803 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 CLEC4AQ9UMR7 237 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 LIPT1Q9Y234 373 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 WDR45Q9Y484 360 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 TACC2O95359 2948 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 CENPVL1A0A0U1RR11 272 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 H3BS24 57 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 ETV2O00321 342 aaPredicted RBP6.63□□□□□ -1.35
NUP88-205ENST00000572809 RFXANKO14593 260 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 KIAA0513O60268 411 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 PRKD3O94806 890 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 ZNF205O95201 554 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 TGDSO95455 350 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 H6PDO95479 791 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 ANP32DO95626 131 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 NTN1O95631 604 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 KRT75O95678 551 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 HRGP04196 525 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 CD1EP15812 388 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 DNASE1P24855 282 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 SHC1P29353 583 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 UGT2B10P36537 528 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 PGM1P36871 562 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 APOBEC1P41238 236 aaKnown RBP6.63□□□□□ -1.35
NUP88-205ENST00000572809 CDKN2CP42773 168 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 POLR2JP52435 117 aaKnown RBP6.63□□□□□ -1.35
NUP88-205ENST00000572809 SESN3P58005 492 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 RAC3P60763 192 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 KCNJ10P78508 379 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 TXNL4AP83876 142 aaKnown RBP6.63□□□□□ -1.35
NUP88-205ENST00000572809 CHRNEQ04844 493 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 SELENBP1Q13228 472 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 SKP2Q13309 424 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 RNPS1Q15287 305 aaKnown RBP6.63□□□□□ -1.35
NUP88-205ENST00000572809 SYPL1Q16563 259 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 EXOC3L2Q2M3D2 409 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 TIGD2Q4W5G0 525 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 FRRS1Q6ZNA5 592 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 LRRC74BQ6ZQY2 392 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 FCRLAQ7L513 359 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 MAVSQ7Z434 540 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 ANKFN1Q8N957 763 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 OR6K3Q8NGY3 331 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 ZNF563Q8TA94 476 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 LRRC8CQ8TDW0 803 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 ZFP90Q8TF47 636 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 ST8SIA1Q92185 356 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 PMM1Q92871 262 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 MARK4Q96L34 752 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 TRNT1Q96Q11 434 aaKnown RBP6.63□□□□□ -1.35
NUP88-205ENST00000572809 OR52B2Q96RD2 323 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 MED18Q9BUE0 208 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 SRXN1Q9BYN0 137 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 QRSL1Q9H0R6 528 aaKnown RBP6.63□□□□□ -1.35
NUP88-205ENST00000572809 RMND5AQ9H871 391 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 PLEKHF2Q9H8W4 249 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 FANCFQ9NPI8 374 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 SDR39U1Q9NRG7 319 aaPredicted RBP6.63□□□□□ -1.35
NUP88-205ENST00000572809 ACER3Q9NUN7 267 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 KLHL28Q9NXS3 571 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 ZIM2Q9NZV7 527 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 DUSP13Q9UII6 198 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 ST6GALNAC2Q9UJ37 374 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 SLC35A3Q9Y2D2 325 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 USH1CQ9Y6N9 552 aa6.63□□□□□ -1.35
NUP88-205ENST00000572809 CSMD2Q7Z408 3487 aa6.62□□□□□ -1.35
NUP88-205ENST00000572809 AGAP5A6NIR3 686 aa6.62□□□□□ -1.35
NUP88-205ENST00000572809 CLDN24A6NM45 220 aa6.62□□□□□ -1.35
NUP88-205ENST00000572809 DNAJC8O75937 253 aaPredicted RBP6.62□□□□□ -1.35
NUP88-205ENST00000572809 YES1P07947 543 aa6.62□□□□□ -1.35
NUP88-205ENST00000572809 ZCCHC18P0CG32 403 aa6.62□□□□□ -1.35
NUP88-205ENST00000572809 NR2F1P10589 423 aa6.62□□□□□ -1.35
NUP88-205ENST00000572809 IFNGR1P15260 489 aa6.62□□□□□ -1.35
NUP88-205ENST00000572809 IL7RP16871 459 aa6.62□□□□□ -1.35
NUP88-205ENST00000572809 ENPP1P22413 925 aa6.62□□□□□ -1.35
NUP88-205ENST00000572809 FKBP2P26885 142 aaKnown RBP6.62□□□□□ -1.35
NUP88-205ENST00000572809 SLC7A1P30825 629 aa6.62□□□□□ -1.35
NUP88-205ENST00000572809 RYKP34925 604 aa6.62□□□□□ -1.35
NUP88-205ENST00000572809 CRATP43155 626 aa6.62□□□□□ -1.35
NUP88-205ENST00000572809 HPCAP84074 193 aa6.62□□□□□ -1.35
NUP88-205ENST00000572809 GUCY1A3Q02108 690 aa6.62□□□□□ -1.35
NUP88-205ENST00000572809 FUT5Q11128 374 aa6.62□□□□□ -1.35
NUP88-205ENST00000572809 MERTKQ12866 999 aa6.62□□□□□ -1.35
NUP88-205ENST00000572809 GNA13Q14344 377 aa6.62□□□□□ -1.35
NUP88-205ENST00000572809 ZNF239Q16600 458 aaKnown RBP6.62□□□□□ -1.35
NUP88-205ENST00000572809 TMPPEQ6ZT21 453 aa6.62□□□□□ -1.35
NUP88-205ENST00000572809 MSANTD1Q6ZTZ1 278 aa6.62□□□□□ -1.35
NUP88-205ENST00000572809 PLEKHM3Q6ZWE6 761 aa6.62□□□□□ -1.35
NUP88-205ENST00000572809 ZNF550Q7Z398 422 aa6.62□□□□□ -1.35
NUP88-205ENST00000572809 HMGN2P46Q86SG4 172 aa6.62□□□□□ -1.35
NUP88-205ENST00000572809 STK32CQ86UX6 486 aa6.62□□□□□ -1.35
NUP88-205ENST00000572809 TUSC5Q8IXB3 177 aa6.62□□□□□ -1.35
NUP88-205ENST00000572809 MIER2Q8N344 545 aa6.62□□□□□ -1.35
NUP88-205ENST00000572809 SLC43A2Q8N370 569 aa6.62□□□□□ -1.35
NUP88-205ENST00000572809 ARFGAP2Q8N6H7 521 aa6.62□□□□□ -1.35
NUP88-205ENST00000572809 PNPT1Q8TCS8 783 aaKnown RBP6.62□□□□□ -1.35
NUP88-205ENST00000572809 RNF128Q8TEB7 428 aa6.62□□□□□ -1.35
NUP88-205ENST00000572809 ABHD3Q8WU67 409 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms