RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, human

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC27-213	ENST00000571643	MED20	Q9H944	212 aa		3.16	□□□□□ -1.9
CDC27-213	ENST00000571643	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	3.16	□□□□□ -1.9
CDC27-213	ENST00000571643	CHMP1A	Q9HD42	196 aa	Predicted RBP	3.16	□□□□□ -1.9
CDC27-213	ENST00000571643	HACD3	Q9P035	362 aa		3.16	□□□□□ -1.9
CDC27-213	ENST00000571643	SEC14L3	Q9UDX4	400 aa		3.16	□□□□□ -1.9
CDC27-213	ENST00000571643	PACSIN2	Q9UNF0	486 aa	Predicted RBP	3.16	□□□□□ -1.9
CDC27-213	ENST00000571643	SLC22A14	Q9Y267	594 aa		3.16	□□□□□ -1.9
CDC27-213	ENST00000571643	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	3.16	□□□□□ -1.9
CDC27-213	ENST00000571643	TMEM184B	Q9Y519	407 aa	Predicted RBP	3.16	□□□□□ -1.9
CDC27-213	ENST00000571643	MUC3A	Q02505	3323 aa		3.16	□□□□□ -1.9
CDC27-213	ENST00000571643	THADA	Q6YHU6	1953 aa		3.16	□□□□□ -1.9
CDC27-213	ENST00000571643	FAM186A	A6NE01	2351 aa		3.16	□□□□□ -1.9
CDC27-213	ENST00000571643	TNRC6B	Q9UPQ9	1833 aa	Known RBP	3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	VCAN	P13611	3396 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643		A0A087WUV0	522 aa	Predicted RBP	3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	IGHV1OR15-9	A0A0B4J2B8	117 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643		A0A1W2PPV4	95 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	ANKRD61	A6NGH8	418 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	PDZK1P1	A8MUH7	402 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	MIF4GD	A9UHW6	222 aa	Known RBP	3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	SMIM1	B2RUZ4	78 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	EEF2K	O00418	725 aa	Known RBP	3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	NR5A2	O00482	541 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	KCNN4	O15554	427 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	LAT	O43561	262 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	RNF13	O43567	381 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	PSTPIP1	O43586	416 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	MT-ND1	P03886	318 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	PNMT	P11086	282 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	PAICS	P22234	425 aa	Known RBP	3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	CA4	P22748	312 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	PSMB4	P28070	264 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	PRDX6	P30041	224 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	MIP	P30301	263 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	DCT	P40126	519 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	CRAT	P43155	626 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	MAGEB1	P43366	347 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	SLC1A6	P48664	564 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	POU3F4	P49335	361 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	CCT3	P49368	545 aa	Known RBP	3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	RGS4	P49798	205 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	GDI2	P50395	445 aa	Known RBP	3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	PPT1	P50897	306 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	BCAP31	P51572	246 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	TPMT	P51580	245 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	SGSH	P51688	502 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	CDH6	P55285	790 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	RGS8	P57771	180 aa	Predicted RBP	3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	RPL26	P61254	145 aa	Known RBP	3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	AP1S1	P61966	158 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	RPS14	P62263	151 aa	Known RBP	3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	POLR2L	P62875	67 aa	Known RBP	3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	RPL24	P83731	157 aa	Known RBP	3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	CCZ1B	P86790	482 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	CCZ1	P86791	482 aa	Predicted RBP	3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	OGDH	Q02218	1023 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	SLC34A1	Q06495	639 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	IL10RB	Q08334	325 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	CALCOCO2	Q13137	446 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	FADD	Q13158	208 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	TFDP2	Q14188	446 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	GPR176	Q14439	515 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	CASP8	Q14790	479 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	PAFAH1B3	Q15102	231 aa	Known RBP	3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	TEX44	Q53QW1	395 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	C2CD6	Q53TS8	623 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	CARD16	Q5EG05	197 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	PDZK1	Q5T2W1	519 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	LRIF1	Q5T3J3	769 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	LYSMD4	Q5XG99	296 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	C11orf63	Q6NUN7	778 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	RWDD4	Q6NW29	188 aa	Known RBP	3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	SCYL2	Q6P3W7	929 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	C22orf39	Q6P5X5	142 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	GPRIN3	Q6ZVF9	776 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	FRA10AC1	Q70Z53	315 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	ASCL5	Q7RTU5	278 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	SLC16A9	Q7RTY1	509 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	HAPLN4	Q86UW8	402 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	TRIM69	Q86WT6	500 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	MICU2	Q8IYU8	434 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	RCOR2	Q8IZ40	523 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	APCDD1	Q8J025	514 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	CCDC185	Q8N715	623 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	STPG4	Q8N801	248 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	ZNF611	Q8N823	705 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	ADAD2	Q8NCV1	583 aa	Known RBP	3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	ICA1L	Q8NDH6	482 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	OR2AP1	Q8NGE2	309 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	OR13F1	Q8NGS4	319 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	OR2A12	Q8NGT7	310 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	OR52I2	Q8NH67	350 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	NDNF	Q8TB73	568 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	ZNF564	Q8TBZ8	553 aa	Predicted RBP	3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	ENKUR	Q8TC29	256 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	WFDC5	Q8TCV5	224 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	GPX8	Q8TED1	209 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	RAB1C	Q92928	201 aa		3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	PINX1	Q96BK5	328 aa	Known RBP	3.15	□□□□□ -1.91
CDC27-213	ENST00000571643	FAF2	Q96CS3	445 aa		3.15	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms