RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 ZNF540Q8NDQ6 660 aa16.62■□□□□ 0.25
SCARF1-204ENST00000570902 OR52E4Q8NGH9 312 aa16.62■□□□□ 0.25
SCARF1-204ENST00000570902 PRR14Q9BWN1 585 aa16.62■□□□□ 0.25
SCARF1-204ENST00000570902 ZNF350Q9GZX5 532 aa16.62■□□□□ 0.25
SCARF1-204ENST00000570902 EML4Q9HC35 981 aaKnown RBP16.62■□□□□ 0.25
SCARF1-204ENST00000570902 CTPS2Q9NRF8 586 aa16.62■□□□□ 0.25
SCARF1-204ENST00000570902 KCNE5Q9UJ90 142 aa16.62■□□□□ 0.25
SCARF1-204ENST00000570902 MKLN1Q9UL63 735 aa16.62■□□□□ 0.25
SCARF1-204ENST00000570902 SLC35A3Q9Y2D2 325 aa16.62■□□□□ 0.25
SCARF1-204ENST00000570902 SLC9A8Q9Y2E8 581 aa16.62■□□□□ 0.25
SCARF1-204ENST00000570902 ATP6V1G2-DDX39BF2Z307 99 aa16.61■□□□□ 0.25
SCARF1-204ENST00000570902 PEX11AO75192 247 aa16.61■□□□□ 0.25
SCARF1-204ENST00000570902 WNT11O96014 354 aa16.61■□□□□ 0.25
SCARF1-204ENST00000570902 PRPS1L1P21108 318 aa16.61■□□□□ 0.25
SCARF1-204ENST00000570902 FOXG1P55316 489 aaPredicted RBP16.61■□□□□ 0.25
SCARF1-204ENST00000570902 PRPS1P60891 318 aa16.61■□□□□ 0.25
SCARF1-204ENST00000570902 RPS26P62854 115 aaKnown RBP16.61■□□□□ 0.25
SCARF1-204ENST00000570902 SWI5Q1ZZU3 235 aa16.61■□□□□ 0.25
SCARF1-204ENST00000570902 UGT3A2Q3SY77 523 aa16.61■□□□□ 0.25
SCARF1-204ENST00000570902 IQCCQ4KMZ1 466 aa16.61■□□□□ 0.25
SCARF1-204ENST00000570902 KLHL24Q6TFL4 600 aa16.61■□□□□ 0.25
SCARF1-204ENST00000570902 C16orf62Q7Z3J2 963 aa16.61■□□□□ 0.25
SCARF1-204ENST00000570902 CCDC103Q8IW40 242 aa16.61■□□□□ 0.25
SCARF1-204ENST00000570902 C3orf49Q96BT1 292 aa16.61■□□□□ 0.25
SCARF1-204ENST00000570902 FBXO17Q96EF6 278 aa16.61■□□□□ 0.25
SCARF1-204ENST00000570902 ARL5BQ96KC2 179 aa16.61■□□□□ 0.25
SCARF1-204ENST00000570902 DUSP26Q9BV47 211 aa16.61■□□□□ 0.25
SCARF1-204ENST00000570902 EXD2Q9NVH0 621 aa16.61■□□□□ 0.25
SCARF1-204ENST00000570902 TMEM181Q9P2C4 612 aa16.61■□□□□ 0.25
SCARF1-204ENST00000570902 TRAPPC4Q9Y296 219 aa16.61■□□□□ 0.25
SCARF1-204ENST00000570902 MALRD1Q5VYJ5 2156 aa16.6■□□□□ 0.25
SCARF1-204ENST00000570902 CENPVL1A0A0U1RR11 272 aa16.6■□□□□ 0.25
SCARF1-204ENST00000570902 TMEM233B4DJY2 109 aa16.6■□□□□ 0.25
SCARF1-204ENST00000570902 RGS16O15492 202 aaPredicted RBP16.6■□□□□ 0.25
SCARF1-204ENST00000570902 KIAA0513O60268 411 aa16.6■□□□□ 0.25
SCARF1-204ENST00000570902 EIF1BO60739 113 aaKnown RBP16.6■□□□□ 0.25
SCARF1-204ENST00000570902 TGFAP01135 160 aa16.6■□□□□ 0.25
SCARF1-204ENST00000570902 PGM1P36871 562 aa16.6■□□□□ 0.25
SCARF1-204ENST00000570902 OR2B6P58173 313 aa16.6■□□□□ 0.25
SCARF1-204ENST00000570902 HBA1P69905 142 aa16.6■□□□□ 0.25
SCARF1-204ENST00000570902 CARTPTQ16568 116 aa16.6■□□□□ 0.25
SCARF1-204ENST00000570902 MST1LQ2TV78 715 aa16.6■□□□□ 0.25
SCARF1-204ENST00000570902 XKR7Q5GH72 579 aa16.6■□□□□ 0.25
SCARF1-204ENST00000570902 C9orf135Q5VTT2 229 aa16.6■□□□□ 0.25
SCARF1-204ENST00000570902 ZCCHC23Q6ZST2 131 aa16.6■□□□□ 0.25
SCARF1-204ENST00000570902 C6orf120Q7Z4R8 191 aa16.6■□□□□ 0.25
SCARF1-204ENST00000570902 FAM71CQ8NEG0 241 aa16.6■□□□□ 0.25
SCARF1-204ENST00000570902 SLC35G5Q96KT7 338 aa16.6■□□□□ 0.25
SCARF1-204ENST00000570902 SORCS2Q96PQ0 1159 aa16.6■□□□□ 0.25
SCARF1-204ENST00000570902 C1orf50Q9BV19 199 aa16.6■□□□□ 0.25
SCARF1-204ENST00000570902 CENPHQ9H3R5 247 aa16.6■□□□□ 0.25
SCARF1-204ENST00000570902 GIMAP2Q9UG22 337 aa16.6■□□□□ 0.25
SCARF1-204ENST00000570902 MOKQ9UQ07 419 aa16.6■□□□□ 0.25
SCARF1-204ENST00000570902 IGHV4-61A0A0C4DH41 118 aa16.59■□□□□ 0.25
SCARF1-204ENST00000570902 NPHS1O60500 1241 aa16.59■□□□□ 0.25
SCARF1-204ENST00000570902 AGR2O95994 175 aa16.59■□□□□ 0.25
SCARF1-204ENST00000570902 CHRNGP07510 517 aa16.59■□□□□ 0.25
SCARF1-204ENST00000570902 GUSBP08236 651 aa16.59■□□□□ 0.25
SCARF1-204ENST00000570902 MPGP29372 298 aa16.59■□□□□ 0.25
SCARF1-204ENST00000570902 HTR3AP46098 478 aa16.59■□□□□ 0.25
SCARF1-204ENST00000570902 SLC35A1P78382 337 aa16.59■□□□□ 0.25
SCARF1-204ENST00000570902 H3F3AP84243 136 aa16.59■□□□□ 0.25
SCARF1-204ENST00000570902 SLC25A3Q00325 362 aa16.59■□□□□ 0.25
SCARF1-204ENST00000570902 ATAD3BQ5T9A4 648 aa16.59■□□□□ 0.25
SCARF1-204ENST00000570902 IL23RQ5VWK5 629 aa16.59■□□□□ 0.25
SCARF1-204ENST00000570902 RIMKLAQ8IXN7 391 aa16.59■□□□□ 0.25
SCARF1-204ENST00000570902 RFLNBQ8N5W9 214 aa16.59■□□□□ 0.25
SCARF1-204ENST00000570902 KRTCAP2Q8N6L1 136 aa16.59■□□□□ 0.25
SCARF1-204ENST00000570902 FNDC5Q8NAU1 212 aa16.59■□□□□ 0.25
SCARF1-204ENST00000570902 DNAJA3Q96EY1 480 aa16.59■□□□□ 0.25
SCARF1-204ENST00000570902 FOXN4Q96NZ1 517 aa16.59■□□□□ 0.25
SCARF1-204ENST00000570902 NAA11Q9BSU3 229 aaPredicted RBP16.59■□□□□ 0.25
SCARF1-204ENST00000570902 OR11A1Q9GZK7 315 aa16.59■□□□□ 0.25
SCARF1-204ENST00000570902 SERHL2Q9H4I8 314 aa16.59■□□□□ 0.25
SCARF1-204ENST00000570902 POLE3Q9NRF9 147 aa16.59■□□□□ 0.25
SCARF1-204ENST00000570902 SLC7A10Q9NS82 523 aa16.59■□□□□ 0.25
SCARF1-204ENST00000570902 FLVCR1Q9Y5Y0 555 aa16.59■□□□□ 0.25
SCARF1-204ENST00000570902 RNF103-CHMP3A0A140T963 221 aa16.58■□□□□ 0.24
SCARF1-204ENST00000570902 TYROBPO43914 113 aa16.58■□□□□ 0.24
SCARF1-204ENST00000570902 ZNF23P17027 643 aa16.58■□□□□ 0.24
SCARF1-204ENST00000570902 PAX7P23759 505 aa16.58■□□□□ 0.24
SCARF1-204ENST00000570902 RYKP34925 604 aa16.58■□□□□ 0.24
SCARF1-204ENST00000570902 SERPINF1P36955 418 aa16.58■□□□□ 0.24
SCARF1-204ENST00000570902 MAPK14Q16539 360 aa16.58■□□□□ 0.24
SCARF1-204ENST00000570902 C6orf136Q5SQH8 315 aa16.58■□□□□ 0.24
SCARF1-204ENST00000570902 CEP85LQ5SZL2 805 aa16.58■□□□□ 0.24
SCARF1-204ENST00000570902 TSPO2Q5TGU0 170 aa16.58■□□□□ 0.24
SCARF1-204ENST00000570902 SLC46A3Q7Z3Q1 461 aa16.58■□□□□ 0.24
SCARF1-204ENST00000570902 ADGRG3Q86Y34 549 aa16.58■□□□□ 0.24
SCARF1-204ENST00000570902 AGR3Q8TD06 166 aa16.58■□□□□ 0.24
SCARF1-204ENST00000570902 DDIT4LQ96D03 193 aa16.58■□□□□ 0.24
SCARF1-204ENST00000570902 ZIM3Q96PE6 472 aa16.58■□□□□ 0.24
SCARF1-204ENST00000570902 VRK1Q99986 396 aaPredicted RBP16.58■□□□□ 0.24
SCARF1-204ENST00000570902 KCNS3Q9BQ31 491 aa16.58■□□□□ 0.24
SCARF1-204ENST00000570902 OBP2BQ9NPH6 170 aa16.58■□□□□ 0.24
SCARF1-204ENST00000570902 EXOSC3Q9NQT5 275 aaKnown RBP16.58■□□□□ 0.24
SCARF1-204ENST00000570902 PCDHGB4Q9UN71 923 aa16.58■□□□□ 0.24
SCARF1-204ENST00000570902 WDR45Q9Y484 360 aa16.58■□□□□ 0.24
SCARF1-204ENST00000570902 HEATR1Q9H583 2144 aaKnown RBP16.57■□□□□ 0.24
SCARF1-204ENST00000570902 TCF21O43680 179 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms