RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 TUBA1AQ71U36 451 aa8.98□□□□□ -0.97
CTDNEP1-202ENST00000570380 LSRQ86X29 649 aaPredicted RBP8.98□□□□□ -0.97
CTDNEP1-202ENST00000570380 SIGLECL1Q8N7X8 197 aa8.98□□□□□ -0.97
CTDNEP1-202ENST00000570380 OR1K1Q8NGR3 316 aa8.98□□□□□ -0.97
CTDNEP1-202ENST00000570380 YIPF5Q969M3 257 aa8.98□□□□□ -0.97
CTDNEP1-202ENST00000570380 CHMP6Q96FZ7 201 aa8.98□□□□□ -0.97
CTDNEP1-202ENST00000570380 C1orf147Q96MC9 270 aaPredicted RBP8.98□□□□□ -0.97
CTDNEP1-202ENST00000570380 ANKRD27Q96NW4 1050 aa8.98□□□□□ -0.97
CTDNEP1-202ENST00000570380 STACQ99469 402 aa8.98□□□□□ -0.97
CTDNEP1-202ENST00000570380 OR11A1Q9GZK7 315 aa8.98□□□□□ -0.97
CTDNEP1-202ENST00000570380 DPH5Q9H2P9 285 aa8.98□□□□□ -0.97
CTDNEP1-202ENST00000570380 PIGUQ9H490 435 aa8.98□□□□□ -0.97
CTDNEP1-202ENST00000570380 DUSP22Q9NRW4 184 aa8.98□□□□□ -0.97
CTDNEP1-202ENST00000570380 ZNF275Q9NSD4 429 aaPredicted RBP8.98□□□□□ -0.97
CTDNEP1-202ENST00000570380 CORINQ9Y5Q5 1042 aa8.98□□□□□ -0.97
CTDNEP1-202ENST00000570380 KCNE3Q9Y6H6 103 aa8.98□□□□□ -0.97
CTDNEP1-202ENST00000570380 A0A0G2JMP0 313 aa8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 A0A0X1KG70 313 aa8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 DNAJC9-AS1A6NH13 148 aa8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 GOLGA6L6A8MZA4 724 aa8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 PPIHO43447 177 aaKnown RBP8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 PLPP2O43688 288 aa8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 LGI1O95970 557 aa8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 HMGN2P05204 90 aaKnown RBP8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 ANPEPP15144 967 aa8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 PAX7P23759 505 aa8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 GCH1P30793 250 aa8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 FRKP42685 505 aaPredicted RBP8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 MAGEA12P43365 314 aa8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 TMEM33P57088 247 aa8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 OR2B6P58173 313 aa8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 POU3F1Q03052 451 aaPredicted RBP8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 SRSF4Q08170 494 aaKnown RBP8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 ZP4Q12836 540 aa8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 CALCOCO2Q13137 446 aa8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 SKP2Q13309 424 aa8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 LASP1Q14847 261 aaKnown RBP8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 MSMPQ1L6U9 139 aa8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 ZNF678Q5SXM1 525 aa8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 DCST2Q5T1A1 773 aa8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 ACSM5Q6NUN0 579 aa8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 NOXRED1Q6NXP6 359 aa8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 RIBC1Q8N443 379 aaPredicted RBP8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 OR4M2Q8NGB6 313 aa8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 ZFP28Q8NHY6 868 aa8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 TMEM234Q8WY98 164 aa8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 RDH5Q92781 318 aa8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 BCL2L2Q92843 193 aaPredicted RBP8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 FAM120BQ96EK7 910 aaKnown RBP8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 MRPL57Q9BQC6 102 aaKnown RBP8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 CCDC106Q9BWC9 280 aa8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 LAT2Q9GZY6 243 aa8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 MRPL46Q9H2W6 279 aaKnown RBP8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 CTPS2Q9NRF8 586 aa8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 ACER3Q9NUN7 267 aa8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 TMEM45AQ9NWC5 275 aa8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 PDP1Q9P0J1 537 aaPredicted RBP8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 REV1Q9UBZ9 1251 aa8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 ZDHHC2Q9UIJ5 367 aa8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 HDGFL3Q9Y3E1 203 aa8.97□□□□□ -0.97
CTDNEP1-202ENST00000570380 ARPC4-TTLL3A0A0A6YYG9 625 aa8.96□□□□□ -0.98
CTDNEP1-202ENST00000570380 OR6C65A6NJZ3 312 aa8.96□□□□□ -0.98
CTDNEP1-202ENST00000570380 NPIPB8E9PQR5 432 aa8.96□□□□□ -0.98
CTDNEP1-202ENST00000570380 J3QLI3 93 aa8.96□□□□□ -0.98
CTDNEP1-202ENST00000570380 SKAP2O75563 359 aaPredicted RBP8.96□□□□□ -0.98
CTDNEP1-202ENST00000570380 CYP7B1O75881 506 aa8.96□□□□□ -0.98
CTDNEP1-202ENST00000570380 IGKV3-15P01624 115 aa8.96□□□□□ -0.98
CTDNEP1-202ENST00000570380 ENO1P06733 434 aaKnown RBP8.96□□□□□ -0.98
CTDNEP1-202ENST00000570380 TCN1P20061 433 aaPredicted RBP8.96□□□□□ -0.98
CTDNEP1-202ENST00000570380 EFNA1P20827 205 aaPredicted RBP8.96□□□□□ -0.98
CTDNEP1-202ENST00000570380 MDKP21741 143 aaPredicted RBP8.96□□□□□ -0.98
CTDNEP1-202ENST00000570380 APOBEC1P41238 236 aaKnown RBP8.96□□□□□ -0.98
CTDNEP1-202ENST00000570380 FOXA1P55317 472 aa8.96□□□□□ -0.98
CTDNEP1-202ENST00000570380 UBE2NP61088 152 aaKnown RBP8.96□□□□□ -0.98
CTDNEP1-202ENST00000570380 SLC17A1Q14916 467 aa8.96□□□□□ -0.98
CTDNEP1-202ENST00000570380 ZNF311Q5JNZ3 666 aa8.96□□□□□ -0.98
CTDNEP1-202ENST00000570380 PDZK1Q5T2W1 519 aa8.96□□□□□ -0.98
CTDNEP1-202ENST00000570380 RBMS3Q6XE24 437 aaKnown RBP8.96□□□□□ -0.98
CTDNEP1-202ENST00000570380 DOK3Q7L591 496 aa8.96□□□□□ -0.98
CTDNEP1-202ENST00000570380 CREG2Q8IUH2 290 aa8.96□□□□□ -0.98
CTDNEP1-202ENST00000570380 LRRC8AQ8IWT6 810 aa8.96□□□□□ -0.98
CTDNEP1-202ENST00000570380 ZIC4Q8N9L1 334 aa8.96□□□□□ -0.98
CTDNEP1-202ENST00000570380 POMGNT2Q8NAT1 580 aa8.96□□□□□ -0.98
CTDNEP1-202ENST00000570380 FAM76AQ8TAV0 307 aa8.96□□□□□ -0.98
CTDNEP1-202ENST00000570380 TMEM45BQ96B21 275 aa8.96□□□□□ -0.98
CTDNEP1-202ENST00000570380 AURKBQ96GD4 344 aaPredicted RBP8.96□□□□□ -0.98
CTDNEP1-202ENST00000570380 ZNF385AQ96PM9 386 aaKnown RBP8.96□□□□□ -0.98
CTDNEP1-202ENST00000570380 TMEM237Q96Q45 408 aa8.96□□□□□ -0.98
CTDNEP1-202ENST00000570380 IQCGQ9H095 443 aaKnown RBP8.96□□□□□ -0.98
CTDNEP1-202ENST00000570380 NELFAQ9H3P2 528 aa8.96□□□□□ -0.98
CTDNEP1-202ENST00000570380 SIRT3Q9NTG7 399 aaPredicted RBP8.96□□□□□ -0.98
CTDNEP1-202ENST00000570380 GRHL1Q9NZI5 618 aa8.96□□□□□ -0.98
CTDNEP1-202ENST00000570380 TMEM181Q9P2C4 612 aa8.96□□□□□ -0.98
CTDNEP1-202ENST00000570380 CHRNA9Q9UGM1 479 aa8.96□□□□□ -0.98
CTDNEP1-202ENST00000570380 OPN4Q9UHM6 478 aa8.96□□□□□ -0.98
CTDNEP1-202ENST00000570380 KCNE5Q9UJ90 142 aa8.96□□□□□ -0.98
CTDNEP1-202ENST00000570380 TRAPPC4Q9Y296 219 aa8.96□□□□□ -0.98
CTDNEP1-202ENST00000570380 A0A096LPE4 126 aa8.95□□□□□ -0.98
CTDNEP1-202ENST00000570380 IGHV2OR16-5A0A0B4J2B6 119 aa8.95□□□□□ -0.98
CTDNEP1-202ENST00000570380 CENPVL1A0A0U1RR11 272 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms