RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 AGAP5A6NIR3 686 aa7.9□□□□□ -1.14
NPLOC4-204ENST00000570324 AP3D1O14617 1153 aa7.9□□□□□ -1.14
NPLOC4-204ENST00000570324 UBDO15205 165 aa7.9□□□□□ -1.14
NPLOC4-204ENST00000570324 POLR3GO15318 223 aaPredicted RBP7.9□□□□□ -1.14
NPLOC4-204ENST00000570324 SNNO75324 88 aaPredicted RBP7.9□□□□□ -1.14
NPLOC4-204ENST00000570324 RAD51DO75771 328 aa7.9□□□□□ -1.14
NPLOC4-204ENST00000570324 CHRM4P08173 479 aa7.9□□□□□ -1.14
NPLOC4-204ENST00000570324 IGHV1-2P23083 117 aa7.9□□□□□ -1.14
NPLOC4-204ENST00000570324 TACR3P29371 465 aa7.9□□□□□ -1.14
NPLOC4-204ENST00000570324 IL12AP29459 219 aa7.9□□□□□ -1.14
NPLOC4-204ENST00000570324 IDUAP35475 653 aa7.9□□□□□ -1.14
NPLOC4-204ENST00000570324 CDKN2CP42773 168 aa7.9□□□□□ -1.14
NPLOC4-204ENST00000570324 SLC1A3P43003 542 aa7.9□□□□□ -1.14
NPLOC4-204ENST00000570324 MAP2K6P52564 334 aa7.9□□□□□ -1.14
NPLOC4-204ENST00000570324 CRISP3P54108 245 aa7.9□□□□□ -1.14
NPLOC4-204ENST00000570324 WDR4P57081 412 aaKnown RBP7.9□□□□□ -1.14
NPLOC4-204ENST00000570324 DSTNP60981 165 aa7.9□□□□□ -1.14
NPLOC4-204ENST00000570324 STX1BP61266 288 aa7.9□□□□□ -1.14
NPLOC4-204ENST00000570324 FAPQ12884 760 aa7.9□□□□□ -1.14
NPLOC4-204ENST00000570324 LARS2Q15031 903 aaKnown RBP7.9□□□□□ -1.14
NPLOC4-204ENST00000570324 PDCD4Q53EL6 469 aaKnown RBP7.9□□□□□ -1.14
NPLOC4-204ENST00000570324 COX20Q5RI15 118 aa7.9□□□□□ -1.14
NPLOC4-204ENST00000570324 TIMM23BQ5SRD1 257 aa7.9□□□□□ -1.14
NPLOC4-204ENST00000570324 MRPL2Q5T653 305 aaKnown RBP7.9□□□□□ -1.14
NPLOC4-204ENST00000570324 ADAM5Q6NVV9 412 aa7.9□□□□□ -1.14
NPLOC4-204ENST00000570324 KLHL17Q6TDP4 642 aa7.9□□□□□ -1.14
NPLOC4-204ENST00000570324 CASP12Q6UXS9 341 aa7.9□□□□□ -1.14
NPLOC4-204ENST00000570324 ADGRG3Q86Y34 549 aa7.9□□□□□ -1.14
NPLOC4-204ENST00000570324 PIAS4Q8N2W9 510 aaPredicted RBP7.9□□□□□ -1.14
NPLOC4-204ENST00000570324 CIARTQ8N365 385 aaPredicted RBP7.9□□□□□ -1.14
NPLOC4-204ENST00000570324 CADM2Q8N3J6 435 aa7.9□□□□□ -1.14
NPLOC4-204ENST00000570324 OR52P1PQ8NH57 321 aa7.9□□□□□ -1.14
NPLOC4-204ENST00000570324 ITCHQ96J02 903 aa7.9□□□□□ -1.14
NPLOC4-204ENST00000570324 RADILQ96JH8 1075 aa7.9□□□□□ -1.14
NPLOC4-204ENST00000570324 TAPBPLQ9BX59 468 aa7.9□□□□□ -1.14
NPLOC4-204ENST00000570324 ZNF701Q9NV72 531 aaPredicted RBP7.9□□□□□ -1.14
NPLOC4-204ENST00000570324 THUMPD1Q9NXG2 353 aaKnown RBP7.9□□□□□ -1.14
NPLOC4-204ENST00000570324 CISD1Q9NZ45 108 aaKnown RBP7.9□□□□□ -1.14
NPLOC4-204ENST00000570324 ZIM2Q9NZV7 527 aa7.9□□□□□ -1.14
NPLOC4-204ENST00000570324 ING1Q9UK53 422 aaPredicted RBP7.9□□□□□ -1.14
NPLOC4-204ENST00000570324 TRAPPC4Q9Y296 219 aa7.9□□□□□ -1.14
NPLOC4-204ENST00000570324 RAI1Q7Z5J4 1906 aaPredicted RBP7.9□□□□□ -1.15
NPLOC4-204ENST00000570324 IGKV3D-15A0A087WSY6 115 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 TMEM72A0PK05 275 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 FAM234BA2RU67 622 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 PRAMEF27A3QJZ7 478 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 DPRXA6NFQ7 191 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 OR5H1A6NKK0 313 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 ZNF716A6NP11 495 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 C5orf58C9J3I9 102 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 ABCD4O14678 606 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 ZNF208O43345 1280 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 BCAS1O75363 584 aaPredicted RBP7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 KRT33AO76009 404 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 C1QCP02747 245 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 BCHEP06276 602 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 GPIP06744 558 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 ETFAP13804 333 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 CDKN1AP38936 164 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 ZNF83P51522 516 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 POLR2JP52435 117 aaKnown RBP7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 SLC18A1P54219 525 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 CDH11P55287 796 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 TGFBR3Q03167 851 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 EPS8Q12929 822 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 VEZF1Q14119 521 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 ETFDHQ16134 617 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 ZSWIM7Q19AV6 140 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 CLEC12BQ2HXU8 276 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 ZNF672Q499Z4 452 aaPredicted RBP7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 SLC9B1Q4ZJI4 515 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 LIN52Q52LA3 116 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 AGAP6Q5VW22 663 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 AP1ARQ63HQ0 302 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 TMEM225Q6GV28 225 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 ABLIM2Q6H8Q1 611 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 WBP2NLQ6ICG8 309 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 OR7E24Q6IFN5 339 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 SLC22A25Q6T423 547 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 TMEM108Q6UXF1 575 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 VRK2Q86Y07 508 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 CCDC103Q8IW40 242 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 MIER2Q8N344 545 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 ZNF433Q8N7K0 673 aaPredicted RBP7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 KBTBD8Q8NFY9 601 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 OR52N5Q8NH56 324 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 ZNF75CPQ92670 426 aaPredicted RBP7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 NEUROG1Q92886 237 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 HS6ST2Q96MM7 605 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 RAD21L1Q9H4I0 556 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 TPT1P8Q9HAU6 139 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 TMBIM4Q9HC24 238 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 TAS2R16Q9NYV7 291 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 OSGIN1Q9UJX0 560 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 MGAT4BQ9UQ53 548 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 SLC9A8Q9Y2E8 581 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 IFT52Q9Y366 437 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 ARID1AO14497 2285 aa7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 HRNRQ86YZ3 2850 aaPredicted RBP7.89□□□□□ -1.15
NPLOC4-204ENST00000570324 CELSR1Q9NYQ6 3014 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms