RNA–Protein interactions for RNA: ENST00000568875.1

SNAPC5-208, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

TSL 2

Gene SNAPC5, Length 1,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-208ENST00000568875 MAN2A2P49641 1150 aa10.61□□□□□ -0.71
SNAPC5-208ENST00000568875 RAB40BQ12829 278 aa10.61□□□□□ -0.71
SNAPC5-208ENST00000568875 SLAMF1Q13291 335 aa10.61□□□□□ -0.71
SNAPC5-208ENST00000568875 MRPL49Q13405 166 aaKnown RBP10.61□□□□□ -0.71
SNAPC5-208ENST00000568875 GINS1Q14691 196 aa10.61□□□□□ -0.71
SNAPC5-208ENST00000568875 SYT14P1Q58G82 188 aa10.61□□□□□ -0.71
SNAPC5-208ENST00000568875 FAM180BQ6P0A1 224 aa10.61□□□□□ -0.71
SNAPC5-208ENST00000568875 SLC48A1Q6P1K1 146 aa10.61□□□□□ -0.71
SNAPC5-208ENST00000568875 RPS19BP1Q86WX3 136 aaKnown RBP10.61□□□□□ -0.71
SNAPC5-208ENST00000568875 SAMD14Q8IZD0 417 aaPredicted RBP10.61□□□□□ -0.71
SNAPC5-208ENST00000568875 BEST3Q8N1M1 668 aa10.61□□□□□ -0.71
SNAPC5-208ENST00000568875 ARMC10Q8N2F6 343 aa10.61□□□□□ -0.71
SNAPC5-208ENST00000568875 CLDN22Q8N7P3 220 aa10.61□□□□□ -0.71
SNAPC5-208ENST00000568875 GRHL3Q8TE85 626 aa10.61□□□□□ -0.71
SNAPC5-208ENST00000568875 TMCO6Q96DC7 493 aa10.61□□□□□ -0.71
SNAPC5-208ENST00000568875 CEP19Q96LK0 163 aa10.61□□□□□ -0.71
SNAPC5-208ENST00000568875 ARHGDIGQ99819 225 aa10.61□□□□□ -0.71
SNAPC5-208ENST00000568875 MED18Q9BUE0 208 aa10.61□□□□□ -0.71
SNAPC5-208ENST00000568875 POLR2J2Q9GZM3 115 aaKnown RBP10.61□□□□□ -0.71
SNAPC5-208ENST00000568875 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.61□□□□□ -0.71
SNAPC5-208ENST00000568875 CDCP1Q9H5V8 836 aa10.61□□□□□ -0.71
SNAPC5-208ENST00000568875 PNO1Q9NRX1 252 aaKnown RBP10.61□□□□□ -0.71
SNAPC5-208ENST00000568875 TAS2R16Q9NYV7 291 aa10.61□□□□□ -0.71
SNAPC5-208ENST00000568875 DNAJC27Q9NZQ0 273 aa10.61□□□□□ -0.71
SNAPC5-208ENST00000568875 NTMQ9P121 344 aa10.61□□□□□ -0.71
SNAPC5-208ENST00000568875 ENTPD4Q9Y227 616 aa10.61□□□□□ -0.71
SNAPC5-208ENST00000568875 A0A1W2PR48 441 aa10.6□□□□□ -0.71
SNAPC5-208ENST00000568875 BLACEA4D250 179 aa10.6□□□□□ -0.71
SNAPC5-208ENST00000568875 SYNDIG1LA6NDD5 238 aa10.6□□□□□ -0.71
SNAPC5-208ENST00000568875 CDK2AP1O14519 115 aa10.6□□□□□ -0.71
SNAPC5-208ENST00000568875 MYL12BO14950 172 aa10.6□□□□□ -0.71
SNAPC5-208ENST00000568875 PRODHO43272 600 aa10.6□□□□□ -0.71
SNAPC5-208ENST00000568875 TPST2O60704 377 aa10.6□□□□□ -0.71
SNAPC5-208ENST00000568875 SOX14O95416 240 aa10.6□□□□□ -0.71
SNAPC5-208ENST00000568875 CHRM4P08173 479 aa10.6□□□□□ -0.71
SNAPC5-208ENST00000568875 ACP2P11117 423 aa10.6□□□□□ -0.71
SNAPC5-208ENST00000568875 TNNI3P19429 210 aa10.6□□□□□ -0.71
SNAPC5-208ENST00000568875 CD96P40200 585 aa10.6□□□□□ -0.71
SNAPC5-208ENST00000568875 RUNX1T1Q06455 604 aa10.6□□□□□ -0.71
SNAPC5-208ENST00000568875 TSPAN31Q12999 210 aa10.6□□□□□ -0.71
SNAPC5-208ENST00000568875 EIF2S3LQ2VIR3 472 aaKnown RBP10.6□□□□□ -0.71
SNAPC5-208ENST00000568875 ZNF324BQ6AW86 544 aaPredicted RBP10.6□□□□□ -0.71
SNAPC5-208ENST00000568875 PHC2Q8IXK0 858 aa10.6□□□□□ -0.71
SNAPC5-208ENST00000568875 OR6T1Q8NGN1 323 aa10.6□□□□□ -0.71
SNAPC5-208ENST00000568875 HPS1Q92902 700 aa10.6□□□□□ -0.71
SNAPC5-208ENST00000568875 ANKRD9Q96BM1 317 aaPredicted RBP10.6□□□□□ -0.71
SNAPC5-208ENST00000568875 TAAR6Q96RI8 345 aa10.6□□□□□ -0.71
SNAPC5-208ENST00000568875 RNF167Q9H6Y7 350 aa10.6□□□□□ -0.71
SNAPC5-208ENST00000568875 SMURF1Q9HCE7 757 aa10.6□□□□□ -0.71
SNAPC5-208ENST00000568875 ADAP2Q9NPF8 381 aa10.6□□□□□ -0.71
SNAPC5-208ENST00000568875 INIPQ9NRY2 104 aa10.6□□□□□ -0.71
SNAPC5-208ENST00000568875 TVP23BQ9NYZ1 205 aa10.6□□□□□ -0.71
SNAPC5-208ENST00000568875 FBXW2Q9UKT8 454 aa10.6□□□□□ -0.71
SNAPC5-208ENST00000568875 ATG4BQ9Y4P1 393 aa10.6□□□□□ -0.71
SNAPC5-208ENST00000568875 DUXAA6NLW8 204 aa10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 M0R3H8 397 aa10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 SNPHO15079 494 aa10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 PROM1O43490 865 aa10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 TLX2O43763 284 aaPredicted RBP10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 PRAMEF2O60811 474 aa10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 LDB3O75112 727 aa10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 CYP7B1O75881 506 aa10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 EPPINO95925 133 aa10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 HMGN2P05204 90 aaKnown RBP10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 NR2F6P10588 404 aa10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 MYL12AP19105 171 aa10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 CPN2P22792 545 aa10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 PRKAR1BP31321 381 aa10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 TNFSF8P32971 234 aa10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 RPS19P39019 145 aaKnown RBP10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 MLF1P58340 268 aa10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 ST3GAL3Q11203 375 aa10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 TPBGQ13641 420 aa10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 TRAM2Q15035 370 aa10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 ELAVL1Q15717 326 aaKnown RBP10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 SLC27A4Q6P1M0 643 aa10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 RASSF6Q6ZTQ3 369 aa10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 NCCRP1Q6ZVX7 275 aaPredicted RBP10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 OR52I1Q8NGK6 324 aa10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 OR5D16Q8NGK9 328 aa10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 TMEM163Q8TC26 289 aa10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 PTPMT1Q8WUK0 201 aaPredicted RBP10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 CNRIP1Q96F85 164 aaPredicted RBP10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 ZNF582Q96NG8 517 aaPredicted RBP10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 SLC38A2Q96QD8 506 aa10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 COQ7Q99807 217 aa10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 WFDC6Q9BQY6 131 aa10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 TEX12Q9BXU0 123 aa10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 POLE4Q9NR33 117 aa10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 MED17Q9NVC6 651 aa10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 CLEC2DQ9UHP7 191 aa10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 ZNF223Q9UK11 482 aaPredicted RBP10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 EXOSC1Q9Y3B2 195 aaKnown RBP10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 GRIP1Q9Y3R0 1128 aa10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 SPACA6W5XKT8 324 aa10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 NBPF19A0A087WUL8 3843 aa10.59□□□□□ -0.71
SNAPC5-208ENST00000568875 KDM4EB2RXH2 506 aaPredicted RBP10.58□□□□□ -0.72
SNAPC5-208ENST00000568875 PRKYO43930 277 aa10.58□□□□□ -0.72
SNAPC5-208ENST00000568875 KCNK2O95069 426 aa10.58□□□□□ -0.72
SNAPC5-208ENST00000568875 AIFM1O95831 613 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms