RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 SLC29A4Q7RTT9 530 aa16.58■□□□□ 0.25
SMPD3-211ENST00000568373 RABEPKQ7Z6M1 372 aa16.58■□□□□ 0.25
SMPD3-211ENST00000568373 KLBQ86Z14 1044 aa16.58■□□□□ 0.25
SMPD3-211ENST00000568373 MINDY2Q8NBR6 621 aa16.58■□□□□ 0.25
SMPD3-211ENST00000568373 OR10H4Q8NGA5 316 aa16.58■□□□□ 0.25
SMPD3-211ENST00000568373 OR52E2Q8NGJ4 325 aa16.58■□□□□ 0.25
SMPD3-211ENST00000568373 RNF31Q96EP0 1072 aa16.58■□□□□ 0.25
SMPD3-211ENST00000568373 TBX5Q99593 518 aa16.58■□□□□ 0.25
SMPD3-211ENST00000568373 TIMP4Q99727 224 aa16.58■□□□□ 0.25
SMPD3-211ENST00000568373 COQ7Q99807 217 aa16.58■□□□□ 0.25
SMPD3-211ENST00000568373 TMEM43Q9BTV4 400 aa16.58■□□□□ 0.25
SMPD3-211ENST00000568373 MED18Q9BUE0 208 aa16.58■□□□□ 0.25
SMPD3-211ENST00000568373 TGIF2Q9GZN2 237 aa16.58■□□□□ 0.25
SMPD3-211ENST00000568373 ISG20L2Q9H9L3 353 aaKnown RBP16.58■□□□□ 0.25
SMPD3-211ENST00000568373 ADGRL4Q9HBW9 690 aa16.58■□□□□ 0.25
SMPD3-211ENST00000568373 PRMT8Q9NR22 394 aaPredicted RBP16.58■□□□□ 0.25
SMPD3-211ENST00000568373 DMDP11532 3685 aa16.58■□□□□ 0.24
SMPD3-211ENST00000568373 IQCMA0A1B0GVH7 501 aa16.58■□□□□ 0.24
SMPD3-211ENST00000568373 DAPL1A0PJW8 107 aa16.58■□□□□ 0.24
SMPD3-211ENST00000568373 OR6C76A6NM76 312 aa16.58■□□□□ 0.24
SMPD3-211ENST00000568373 TSPAN2O60636 221 aa16.58■□□□□ 0.24
SMPD3-211ENST00000568373 SBK2P0C263 348 aa16.58■□□□□ 0.24
SMPD3-211ENST00000568373 HIST1H1CP16403 213 aaKnown RBP16.58■□□□□ 0.24
SMPD3-211ENST00000568373 RPS4XP62701 263 aaKnown RBP16.58■□□□□ 0.24
SMPD3-211ENST00000568373 GALEQ14376 348 aa16.58■□□□□ 0.24
SMPD3-211ENST00000568373 ZNF181Q2M3W8 571 aa16.58■□□□□ 0.24
SMPD3-211ENST00000568373 DPY19L2P2Q6ZN68 376 aa16.58■□□□□ 0.24
SMPD3-211ENST00000568373 LANCL3Q6ZV70 420 aa16.58■□□□□ 0.24
SMPD3-211ENST00000568373 ARIH2OSQ8N7S6 290 aa16.58■□□□□ 0.24
SMPD3-211ENST00000568373 ATP6V1C2Q8NEY4 427 aa16.58■□□□□ 0.24
SMPD3-211ENST00000568373 LAT2Q9GZY6 243 aa16.58■□□□□ 0.24
SMPD3-211ENST00000568373 KLHL21Q9UJP4 597 aa16.58■□□□□ 0.24
SMPD3-211ENST00000568373 IER3IP1Q9Y5U9 82 aa16.58■□□□□ 0.24
SMPD3-211ENST00000568373 HLA-DPB1P04440 258 aa16.57■□□□□ 0.24
SMPD3-211ENST00000568373 MST1P26927 711 aa16.57■□□□□ 0.24
SMPD3-211ENST00000568373 SDC2P34741 201 aa16.57■□□□□ 0.24
SMPD3-211ENST00000568373 RPL4P36578 427 aaKnown RBP16.57■□□□□ 0.24
SMPD3-211ENST00000568373 CCL7P80098 99 aa16.57■□□□□ 0.24
SMPD3-211ENST00000568373 TBC1D25Q3MII6 688 aa16.57■□□□□ 0.24
SMPD3-211ENST00000568373 VASNQ6EMK4 673 aa16.57■□□□□ 0.24
SMPD3-211ENST00000568373 PLEKHG7Q6ZR37 379 aa16.57■□□□□ 0.24
SMPD3-211ENST00000568373 FAM98AQ8NCA5 519 aaKnown RBP16.57■□□□□ 0.24
SMPD3-211ENST00000568373 SDR9C7Q8NEX9 313 aa16.57■□□□□ 0.24
SMPD3-211ENST00000568373 OR4D9Q8NGE8 314 aa16.57■□□□□ 0.24
SMPD3-211ENST00000568373 OR4K13Q8NH42 304 aa16.57■□□□□ 0.24
SMPD3-211ENST00000568373 STT3BQ8TCJ2 826 aa16.57■□□□□ 0.24
SMPD3-211ENST00000568373 PIGKQ92643 395 aa16.57■□□□□ 0.24
SMPD3-211ENST00000568373 CEP19Q96LK0 163 aa16.57■□□□□ 0.24
SMPD3-211ENST00000568373 OR6C1Q96RD1 312 aa16.57■□□□□ 0.24
SMPD3-211ENST00000568373 TMED9Q9BVK6 235 aa16.57■□□□□ 0.24
SMPD3-211ENST00000568373 RTN4RQ9BZR6 473 aa16.57■□□□□ 0.24
SMPD3-211ENST00000568373 ABCB10Q9NRK6 738 aa16.57■□□□□ 0.24
SMPD3-211ENST00000568373 RHBDL2Q9NX52 303 aa16.57■□□□□ 0.24
SMPD3-211ENST00000568373 BABAM2Q9NXR7 383 aa16.57■□□□□ 0.24
SMPD3-211ENST00000568373 IGLV3-12A0A075B6K2 115 aa16.57■□□□□ 0.24
SMPD3-211ENST00000568373 ISPDA4D126 451 aa16.57■□□□□ 0.24
SMPD3-211ENST00000568373 TBX1O43435 398 aa16.57■□□□□ 0.24
SMPD3-211ENST00000568373 GYPBP06028 91 aa16.57■□□□□ 0.24
SMPD3-211ENST00000568373 MRPL3P09001 348 aaKnown RBP16.57■□□□□ 0.24
SMPD3-211ENST00000568373 TGM1P22735 817 aa16.57■□□□□ 0.24
SMPD3-211ENST00000568373 TGM4P49221 684 aa16.57■□□□□ 0.24
SMPD3-211ENST00000568373 PLCXD2Q0VAA5 305 aa16.57■□□□□ 0.24
SMPD3-211ENST00000568373 SHISA6Q6ZSJ9 500 aa16.57■□□□□ 0.24
SMPD3-211ENST00000568373 LYSMD2Q8IV50 215 aa16.57■□□□□ 0.24
SMPD3-211ENST00000568373 ZNF441Q8N8Z8 693 aa16.57■□□□□ 0.24
SMPD3-211ENST00000568373 FAM181AQ8N9Y4 354 aa16.57■□□□□ 0.24
SMPD3-211ENST00000568373 SYT14Q8NB59 555 aa16.57■□□□□ 0.24
SMPD3-211ENST00000568373 PPP1R14BQ96C90 147 aa16.57■□□□□ 0.24
SMPD3-211ENST00000568373 SLC30A2Q9BRI3 323 aa16.57■□□□□ 0.24
SMPD3-211ENST00000568373 ASB6Q9NWX5 421 aa16.57■□□□□ 0.24
SMPD3-211ENST00000568373 ADAM18Q9Y3Q7 739 aa16.57■□□□□ 0.24
SMPD3-211ENST00000568373 UGT2A1Q9Y4X1 527 aa16.57■□□□□ 0.24
SMPD3-211ENST00000568373 TTC28Q96AY4 2481 aa16.56■□□□□ 0.24
SMPD3-211ENST00000568373 VPS13AQ96RL7 3174 aa16.56■□□□□ 0.24
SMPD3-211ENST00000568373 CLEC2LP0C7M8 214 aa16.56■□□□□ 0.24
SMPD3-211ENST00000568373 ABCD3P28288 659 aa16.56■□□□□ 0.24
SMPD3-211ENST00000568373 TNFSF8P32971 234 aa16.56■□□□□ 0.24
SMPD3-211ENST00000568373 SLC6A8P48029 635 aa16.56■□□□□ 0.24
SMPD3-211ENST00000568373 PRPS1P60891 318 aa16.56■□□□□ 0.24
SMPD3-211ENST00000568373 ZNF117Q03924 483 aa16.56■□□□□ 0.24
SMPD3-211ENST00000568373 POU4F2Q12837 409 aa16.56■□□□□ 0.24
SMPD3-211ENST00000568373 HNRNPA0Q13151 305 aaKnown RBP16.56■□□□□ 0.24
SMPD3-211ENST00000568373 GPR50Q13585 617 aa16.56■□□□□ 0.24
SMPD3-211ENST00000568373 SLC38A9Q8NBW4 561 aa16.56■□□□□ 0.24
SMPD3-211ENST00000568373 C17orf47Q8NEP4 570 aa16.56■□□□□ 0.24
SMPD3-211ENST00000568373 LIPHQ8WWY8 451 aa16.56■□□□□ 0.24
SMPD3-211ENST00000568373 EDAQ92838 391 aa16.56■□□□□ 0.24
SMPD3-211ENST00000568373 ZNF524Q96C55 264 aa16.56■□□□□ 0.24
SMPD3-211ENST00000568373 OMA1Q96E52 524 aa16.56■□□□□ 0.24
SMPD3-211ENST00000568373 NRIP3Q9NQ35 241 aa16.56■□□□□ 0.24
SMPD3-211ENST00000568373 PCDHGB6Q9Y5F9 930 aa16.56■□□□□ 0.24
SMPD3-211ENST00000568373 IGHV5-10-1A0A0J9YXX1 117 aa16.55■□□□□ 0.24
SMPD3-211ENST00000568373 A0A1W2PQD3 144 aa16.55■□□□□ 0.24
SMPD3-211ENST00000568373 ALG1L2C9J202 215 aa16.55■□□□□ 0.24
SMPD3-211ENST00000568373 ARPC3O15145 178 aa16.55■□□□□ 0.24
SMPD3-211ENST00000568373 RGS5O15539 181 aa16.55■□□□□ 0.24
SMPD3-211ENST00000568373 GAAP10253 952 aa16.55■□□□□ 0.24
SMPD3-211ENST00000568373 GRK6P43250 576 aa16.55■□□□□ 0.24
SMPD3-211ENST00000568373 FOXL2P58012 376 aa16.55■□□□□ 0.24
SMPD3-211ENST00000568373 ZNF74Q16587 644 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms