RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 GTF2IRD2BQ6EKJ0 949 aa11.61□□□□□ -0.55
CNOT1-213ENST00000568158 ERICH5Q6P6B1 374 aa11.61□□□□□ -0.55
CNOT1-213ENST00000568158 HACD2Q6Y1H2 254 aa11.61□□□□□ -0.55
CNOT1-213ENST00000568158 ATG4DQ86TL0 474 aaPredicted RBP11.61□□□□□ -0.55
CNOT1-213ENST00000568158 GTF2IRD2Q86UP8 949 aa11.61□□□□□ -0.55
CNOT1-213ENST00000568158 RBM45Q8IUH3 476 aaKnown RBP11.61□□□□□ -0.55
CNOT1-213ENST00000568158 MCEMP1Q8IX19 187 aa11.61□□□□□ -0.55
CNOT1-213ENST00000568158 TUSC5Q8IXB3 177 aa11.61□□□□□ -0.55
CNOT1-213ENST00000568158 MICU2Q8IYU8 434 aa11.61□□□□□ -0.55
CNOT1-213ENST00000568158 ANKS4BQ8N8V4 417 aa11.61□□□□□ -0.55
CNOT1-213ENST00000568158 ACBD4Q8NC06 268 aa11.61□□□□□ -0.55
CNOT1-213ENST00000568158 BHLHE22Q8NFJ8 381 aaPredicted RBP11.61□□□□□ -0.55
CNOT1-213ENST00000568158 OR2T12Q8NG77 320 aa11.61□□□□□ -0.55
CNOT1-213ENST00000568158 OR52E4Q8NGH9 312 aa11.61□□□□□ -0.55
CNOT1-213ENST00000568158 ABHD3Q8WU67 409 aa11.61□□□□□ -0.55
CNOT1-213ENST00000568158 SLC25A43Q8WUT9 341 aaPredicted RBP11.61□□□□□ -0.55
CNOT1-213ENST00000568158 RNASE6Q93091 150 aaKnown RBP11.61□□□□□ -0.55
CNOT1-213ENST00000568158 SLC35B4Q969S0 331 aa11.61□□□□□ -0.55
CNOT1-213ENST00000568158 DDIT4LQ96D03 193 aa11.61□□□□□ -0.55
CNOT1-213ENST00000568158 ARHGDIGQ99819 225 aa11.61□□□□□ -0.55
CNOT1-213ENST00000568158 OPN3Q9H1Y3 402 aaPredicted RBP11.61□□□□□ -0.55
CNOT1-213ENST00000568158 PIGMQ9H3S5 423 aa11.61□□□□□ -0.55
CNOT1-213ENST00000568158 KLHL28Q9NXS3 571 aa11.61□□□□□ -0.55
CNOT1-213ENST00000568158 RPS6KB2Q9UBS0 482 aa11.61□□□□□ -0.55
CNOT1-213ENST00000568158 SLC13A4Q9UKG4 626 aa11.61□□□□□ -0.55
CNOT1-213ENST00000568158 PRDM4Q9UKN5 801 aa11.61□□□□□ -0.55
CNOT1-213ENST00000568158 PACSIN3Q9UKS6 424 aa11.61□□□□□ -0.55
CNOT1-213ENST00000568158 HDGFL3Q9Y3E1 203 aa11.61□□□□□ -0.55
CNOT1-213ENST00000568158 PKDREJQ9NTG1 2253 aa11.6□□□□□ -0.55
CNOT1-213ENST00000568158 A0A1B0GWA3 101 aa11.6□□□□□ -0.55
CNOT1-213ENST00000568158 TMEM229AB2RXF0 380 aa11.6□□□□□ -0.55
CNOT1-213ENST00000568158 SMAD9O15198 467 aaKnown RBP11.6□□□□□ -0.55
CNOT1-213ENST00000568158 HNRNPRO43390 633 aaKnown RBP11.6□□□□□ -0.55
CNOT1-213ENST00000568158 DCTN3O75935 186 aa11.6□□□□□ -0.55
CNOT1-213ENST00000568158 PMS2P2O95744 297 aa11.6□□□□□ -0.55
CNOT1-213ENST00000568158 C8BP07358 591 aa11.6□□□□□ -0.55
CNOT1-213ENST00000568158 IGFBP2P18065 325 aa11.6□□□□□ -0.55
CNOT1-213ENST00000568158 FPR1P21462 350 aa11.6□□□□□ -0.55
CNOT1-213ENST00000568158 KDELR2P33947 212 aa11.6□□□□□ -0.55
CNOT1-213ENST00000568158 CTBP2P56545 445 aa11.6□□□□□ -0.55
CNOT1-213ENST00000568158 RGS8P57771 180 aaPredicted RBP11.6□□□□□ -0.55
CNOT1-213ENST00000568158 CSNK2A1P68400 391 aaPredicted RBP11.6□□□□□ -0.55
CNOT1-213ENST00000568158 RASGEF1BQ0VAM2 473 aa11.6□□□□□ -0.55
CNOT1-213ENST00000568158 CEACAM7Q14002 265 aa11.6□□□□□ -0.55
CNOT1-213ENST00000568158 NPTX1Q15818 432 aa11.6□□□□□ -0.55
CNOT1-213ENST00000568158 NRF1Q16656 503 aa11.6□□□□□ -0.55
CNOT1-213ENST00000568158 FBXL19-AS1Q494R0 122 aa11.6□□□□□ -0.55
CNOT1-213ENST00000568158 GKAP1Q5VSY0 366 aaPredicted RBP11.6□□□□□ -0.55
CNOT1-213ENST00000568158 ZNF474Q6S9Z5 364 aaPredicted RBP11.6□□□□□ -0.55
CNOT1-213ENST00000568158 FAM214BQ7L5A3 538 aa11.6□□□□□ -0.55
CNOT1-213ENST00000568158 NUFIP2Q7Z417 695 aaKnown RBP11.6□□□□□ -0.55
CNOT1-213ENST00000568158 ARPINQ7Z6K5 226 aa11.6□□□□□ -0.55
CNOT1-213ENST00000568158 CCDC103Q8IW40 242 aa11.6□□□□□ -0.55
CNOT1-213ENST00000568158 DMRTC2Q8IXT2 367 aaPredicted RBP11.6□□□□□ -0.55
CNOT1-213ENST00000568158 ZNF295-AS1Q8N0V1 137 aa11.6□□□□□ -0.55
CNOT1-213ENST00000568158 FITM2Q8N6M3 262 aa11.6□□□□□ -0.55
CNOT1-213ENST00000568158 LSMEM1Q8N8F7 131 aa11.6□□□□□ -0.55
CNOT1-213ENST00000568158 OR6T1Q8NGN1 323 aa11.6□□□□□ -0.55
CNOT1-213ENST00000568158 VANGL1Q8TAA9 524 aaPredicted RBP11.6□□□□□ -0.55
CNOT1-213ENST00000568158 RNF217Q8TC41 542 aa11.6□□□□□ -0.55
CNOT1-213ENST00000568158 RNF128Q8TEB7 428 aa11.6□□□□□ -0.55
CNOT1-213ENST00000568158 GMPPAQ96IJ6 420 aaPredicted RBP11.6□□□□□ -0.55
CNOT1-213ENST00000568158 MCHR1Q99705 422 aa11.6□□□□□ -0.55
CNOT1-213ENST00000568158 SPOCK3Q9BQ16 436 aa11.6□□□□□ -0.55
CNOT1-213ENST00000568158 ZNF559Q9BR84 538 aa11.6□□□□□ -0.55
CNOT1-213ENST00000568158 RBM24Q9BX46 236 aaKnown RBP11.6□□□□□ -0.55
CNOT1-213ENST00000568158 POTEKPQ9BYX7 375 aa11.6□□□□□ -0.55
CNOT1-213ENST00000568158 TRIM2Q9C040 744 aa11.6□□□□□ -0.55
CNOT1-213ENST00000568158 TMEM27Q9HBJ8 222 aa11.6□□□□□ -0.55
CNOT1-213ENST00000568158 PLSCR4Q9NRQ2 329 aa11.6□□□□□ -0.55
CNOT1-213ENST00000568158 TMEM181Q9P2C4 612 aa11.6□□□□□ -0.55
CNOT1-213ENST00000568158 TAGLN3Q9UI15 199 aa11.6□□□□□ -0.55
CNOT1-213ENST00000568158 ING1Q9UK53 422 aaPredicted RBP11.6□□□□□ -0.55
CNOT1-213ENST00000568158 TRAPPC4Q9Y296 219 aa11.6□□□□□ -0.55
CNOT1-213ENST00000568158 A8MVM7 634 aa11.59□□□□□ -0.55
CNOT1-213ENST00000568158 ZNF814B7Z6K7 855 aa11.59□□□□□ -0.55
CNOT1-213ENST00000568158 MSTNO14793 375 aa11.59□□□□□ -0.55
CNOT1-213ENST00000568158 CYTIPO60759 359 aa11.59□□□□□ -0.55
CNOT1-213ENST00000568158 RAMP1O60894 148 aa11.59□□□□□ -0.55
CNOT1-213ENST00000568158 SS18L1O75177 396 aaPredicted RBP11.59□□□□□ -0.55
CNOT1-213ENST00000568158 PRF1P14222 555 aa11.59□□□□□ -0.55
CNOT1-213ENST00000568158 TNFRSF1BP20333 461 aa11.59□□□□□ -0.55
CNOT1-213ENST00000568158 GSK3BP49841 420 aa11.59□□□□□ -0.55
CNOT1-213ENST00000568158 SLC25A3Q00325 362 aa11.59□□□□□ -0.55
CNOT1-213ENST00000568158 FAM27E3Q08E93 113 aa11.59□□□□□ -0.55
CNOT1-213ENST00000568158 P3H2Q8IVL5 708 aa11.59□□□□□ -0.55
CNOT1-213ENST00000568158 SLC43A2Q8N370 569 aa11.59□□□□□ -0.55
CNOT1-213ENST00000568158 CCDC197Q8NCU1 140 aa11.59□□□□□ -0.55
CNOT1-213ENST00000568158 ZNF300Q96RE9 604 aaPredicted RBP11.59□□□□□ -0.55
CNOT1-213ENST00000568158 C12orf49Q9H741 205 aa11.59□□□□□ -0.55
CNOT1-213ENST00000568158 GLRX2Q9NS18 164 aa11.59□□□□□ -0.55
CNOT1-213ENST00000568158 KLHL13Q9P2N7 655 aa11.59□□□□□ -0.55
CNOT1-213ENST00000568158 PROCRQ9UNN8 238 aa11.59□□□□□ -0.55
CNOT1-213ENST00000568158 AP3M1Q9Y2T2 418 aa11.59□□□□□ -0.55
CNOT1-213ENST00000568158 SH3GLB1Q9Y371 365 aa11.59□□□□□ -0.55
CNOT1-213ENST00000568158 EMC9Q9Y3B6 208 aa11.59□□□□□ -0.55
CNOT1-213ENST00000568158 FREM1Q5H8C1 2179 aa11.58□□□□□ -0.56
CNOT1-213ENST00000568158 ELOA3DA6NLF2 546 aaPredicted RBP11.58□□□□□ -0.56
CNOT1-213ENST00000568158 CPSF4LA6NMK7 179 aaKnown RBP11.58□□□□□ -0.56
CNOT1-213ENST00000568158 GSTA4O15217 222 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms